RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 HMMRO75330 724 aa23.32■■□□□ 1.32
AC008878.3-201ENST00000617428 CENPJQ9HC77 1338 aaPredicted RBP23.31■■□□□ 1.32
AC008878.3-201ENST00000617428 GNL2Q13823 731 aaKnown RBP23.31■■□□□ 1.32
AC008878.3-201ENST00000617428 UACAQ9BZF9 1416 aa23.31■■□□□ 1.32
AC008878.3-201ENST00000617428 ZNF644Q9H582 1327 aaPredicted RBP23.3■■□□□ 1.32
AC008878.3-201ENST00000617428 TRIM6-TRIM34B2RNG4 842 aa23.28■■□□□ 1.32
AC008878.3-201ENST00000617428 PMFBP1Q8TBY8 1022 aa23.28■■□□□ 1.32
AC008878.3-201ENST00000617428 CGNL1Q0VF96 1302 aa23.28■■□□□ 1.32
AC008878.3-201ENST00000617428 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.326e-9■■■■■ 45.1
AC008878.3-201ENST00000617428 DHX57Q6P158 1386 aaKnown RBP23.27■■□□□ 1.31
AC008878.3-201ENST00000617428 KIF15Q9NS87 1388 aa23.26■■□□□ 1.31
AC008878.3-201ENST00000617428 EVA1CP58658 441 aa23.26■■□□□ 1.31
AC008878.3-201ENST00000617428 PDE3BQ13370 1112 aa23.26■■□□□ 1.31
AC008878.3-201ENST00000617428 GOLGA6L6A8MZA4 724 aa23.25■■□□□ 1.31
AC008878.3-201ENST00000617428 NRDCO43847 1150 aa23.25■■□□□ 1.31
AC008878.3-201ENST00000617428 MYBBP1AQ9BQG0 1328 aaKnown RBP23.25■■□□□ 1.31
AC008878.3-201ENST00000617428 ERICH6BQ5W0A0 696 aa23.24■■□□□ 1.31
AC008878.3-201ENST00000617428 GPATCH3Q96I76 525 aa23.23■■□□□ 1.31
AC008878.3-201ENST00000617428 PHLDB1Q86UU1 1377 aa23.22■■□□□ 1.31
AC008878.3-201ENST00000617428 BCL2L13Q9BXK5 485 aa23.22■■□□□ 1.31
AC008878.3-201ENST00000617428 CLSTN1O94985 981 aa23.22■■□□□ 1.31
AC008878.3-201ENST00000617428 TEFQ10587 303 aa23.22■■□□□ 1.31
AC008878.3-201ENST00000617428 C1orf141Q5JVX7 400 aa23.22■■□□□ 1.31
AC008878.3-201ENST00000617428 G3V3G9 751 aa23.21■■□□□ 1.31
AC008878.3-201ENST00000617428 DCAF8Q5TAQ9 597 aa23.21■■□□□ 1.31
AC008878.3-201ENST00000617428 USP47Q96K76 1375 aa23.21■■□□□ 1.31
AC008878.3-201ENST00000617428 FRAT2O75474 233 aaPredicted RBP23.2■■□□□ 1.31
AC008878.3-201ENST00000617428 MFAP1P55081 439 aaKnown RBP23.2■■□□□ 1.31
AC008878.3-201ENST00000617428 MYOM3Q5VTT5 1437 aa23.19■■□□□ 1.3
AC008878.3-201ENST00000617428 TCERG1O14776 1098 aaKnown RBP23.19■■□□□ 1.3
AC008878.3-201ENST00000617428 SLKQ9H2G2 1235 aaPredicted RBP23.19■■□□□ 1.3
AC008878.3-201ENST00000617428 PSME1Q06323 249 aa23.19■■□□□ 1.3
AC008878.3-201ENST00000617428 RBM19Q9Y4C8 960 aaKnown RBP23.17■■□□□ 1.3
AC008878.3-201ENST00000617428 PRKRIP1Q9H875 184 aaPredicted RBP23.17■■□□□ 1.3
AC008878.3-201ENST00000617428 AFAP1Q8N556 730 aa23.16■■□□□ 1.3
AC008878.3-201ENST00000617428 NGEFQ8N5V2 710 aa23.14■■□□□ 1.29
AC008878.3-201ENST00000617428 APAF1O14727 1248 aa23.13■■□□□ 1.29
AC008878.3-201ENST00000617428 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.13■■□□□ 1.29
AC008878.3-201ENST00000617428 NCAPD3P42695 1498 aa23.12■■□□□ 1.29
AC008878.3-201ENST00000617428 TOMM22Q9NS69 142 aa23.12■■□□□ 1.29
AC008878.3-201ENST00000617428 EIF2S2P20042 333 aaKnown RBP23.11■■□□□ 1.29
AC008878.3-201ENST00000617428 DIAPH1O60610 1272 aaKnown RBP23.11■■□□□ 1.29
AC008878.3-201ENST00000617428 TTC5Q8N0Z6 440 aa23.11■■□□□ 1.29
AC008878.3-201ENST00000617428 DRC7Q8IY82 874 aa23.1■■□□□ 1.29
AC008878.3-201ENST00000617428 NOL8Q76FK4 1167 aaKnown RBP23.09■■□□□ 1.29
AC008878.3-201ENST00000617428 HSP90B1P14625 803 aaKnown RBP23.09■■□□□ 1.29
AC008878.3-201ENST00000617428 RTN4Q9NQC3 1192 aaKnown RBP23.09■■□□□ 1.29
AC008878.3-201ENST00000617428 SYTL4Q96C24 671 aaPredicted RBP23.09■■□□□ 1.29
AC008878.3-201ENST00000617428 GBP4Q96PP9 640 aa23.09■■□□□ 1.29
AC008878.3-201ENST00000617428 MSH5O43196 834 aa23.08■■□□□ 1.29
AC008878.3-201ENST00000617428 NAP1L5Q96NT1 182 aaPredicted RBP23.08■■□□□ 1.28
AC008878.3-201ENST00000617428 E9PSI1 815 aa23.07■■□□□ 1.28
AC008878.3-201ENST00000617428 PLIN1O60240 522 aa23.07■■□□□ 1.28
AC008878.3-201ENST00000617428 TMEM132EQ6IEE7 984 aa23.07■■□□□ 1.28
AC008878.3-201ENST00000617428 FGD6Q6ZV73 1430 aa23.07■■□□□ 1.28
AC008878.3-201ENST00000617428 ZKSCAN2Q63HK3 967 aa23.06■■□□□ 1.28
AC008878.3-201ENST00000617428 NECTIN2Q92692 538 aa23.05■■□□□ 1.28
AC008878.3-201ENST00000617428 ATF3P18847 181 aa23.04■■□□□ 1.28
AC008878.3-201ENST00000617428 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
AC008878.3-201ENST00000617428 NEXNQ0ZGT2 675 aa23.04■■□□□ 1.28
AC008878.3-201ENST00000617428 GZF1Q9H116 711 aaPredicted RBP23.04■■□□□ 1.28
AC008878.3-201ENST00000617428 HTATSF1O43719 755 aaKnown RBP23.03■■□□□ 1.28
AC008878.3-201ENST00000617428 NCBP3Q53F19 620 aaKnown RBP23.03■■□□□ 1.28
AC008878.3-201ENST00000617428 ANKRD50Q9ULJ7 1429 aa23.03■■□□□ 1.28
AC008878.3-201ENST00000617428 RIPK4P57078 832 aa23.03■■□□□ 1.28
AC008878.3-201ENST00000617428 ANKRD45Q5TZF3 282 aa23.02■■□□□ 1.28
AC008878.3-201ENST00000617428 COG6Q9Y2V7 657 aa23.01■■□□□ 1.27
AC008878.3-201ENST00000617428 NUTM2GQ5VZR2 741 aa23.01■■□□□ 1.27
AC008878.3-201ENST00000617428 RILPL2Q969X0 211 aa23.01■■□□□ 1.27
AC008878.3-201ENST00000617428 GGNBP2Q9H3C7 697 aa23.01■■□□□ 1.27
AC008878.3-201ENST00000617428 C9orf78Q9NZ63 289 aaPredicted RBP23.01■■□□□ 1.27
AC008878.3-201ENST00000617428 FOXD4L1Q9NU39 408 aa23■■□□□ 1.27
AC008878.3-201ENST00000617428 STAC3Q96MF2 364 aa23■■□□□ 1.27
AC008878.3-201ENST00000617428 CABP2Q9NPB3 220 aa22.99■■□□□ 1.27
AC008878.3-201ENST00000617428 GRIN2BQ13224 1484 aa22.99■■□□□ 1.27
AC008878.3-201ENST00000617428 L1TD1Q5T7N2 865 aaKnown RBP22.98■■□□□ 1.27
AC008878.3-201ENST00000617428 RAPGEF4Q8WZA2 1011 aa22.97■■□□□ 1.27
AC008878.3-201ENST00000617428 HMOX1P09601 288 aa22.97■■□□□ 1.27
AC008878.3-201ENST00000617428 MSNP26038 577 aaKnown RBP22.97■■□□□ 1.27
AC008878.3-201ENST00000617428 CHAF1AQ13111 956 aaPredicted RBP22.97■■□□□ 1.27
AC008878.3-201ENST00000617428 MEX3CQ5U5Q3 659 aaKnown RBP22.96■■□□□ 1.27
AC008878.3-201ENST00000617428 NLRP6P59044 892 aa22.96■■□□□ 1.27
AC008878.3-201ENST00000617428 PRG4Q92954 1404 aaPredicted RBP22.96■■□□□ 1.27
AC008878.3-201ENST00000617428 NLRP2Q9NX02 1062 aa22.96■■□□□ 1.27
AC008878.3-201ENST00000617428 RASSF8Q8NHQ8 419 aa22.95■■□□□ 1.26
AC008878.3-201ENST00000617428 CFAP70Q5T0N1 1121 aa22.95■■□□□ 1.26
AC008878.3-201ENST00000617428 AMER1Q5JTC6 1135 aaPredicted RBP22.94■■□□□ 1.26
AC008878.3-201ENST00000617428 TXNDC2Q86VQ3 553 aa22.94■■□□□ 1.26
AC008878.3-201ENST00000617428 FKBP5Q13451 457 aaPredicted RBP22.93■■□□□ 1.26
AC008878.3-201ENST00000617428 EXOC6Q8TAG9 804 aa22.93■■□□□ 1.26
AC008878.3-201ENST00000617428 ST18O60284 1047 aa22.93■■□□□ 1.26
AC008878.3-201ENST00000617428 CCDC34Q96HJ3 373 aa22.92■■□□□ 1.26
AC008878.3-201ENST00000617428 KIF16BQ96L93 1317 aa22.91■■□□□ 1.26
AC008878.3-201ENST00000617428 SYAP1Q96A49 352 aaPredicted RBP22.91■■□□□ 1.26
AC008878.3-201ENST00000617428 NESP48681 1621 aa22.91■■□□□ 1.26
AC008878.3-201ENST00000617428 PRDM2Q13029 1718 aa22.91■■□□□ 1.26
AC008878.3-201ENST00000617428 CRBNQ96SW2 442 aa22.91■■□□□ 1.26
AC008878.3-201ENST00000617428 RRP1P56182 461 aaKnown RBP22.9■■□□□ 1.26
AC008878.3-201ENST00000617428 DDX58O95786 925 aaKnown RBP22.9■■□□□ 1.26
AC008878.3-201ENST00000617428 KIF7Q2M1P5 1343 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms