RNA–Protein interactions for RNA: ENST00000616956.1

SEM1-216, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3

Gene SEM1, Length 575 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-216ENST00000616956 OSBPP22059 807 aa8.36□□□□□ -1.07
SEM1-216ENST00000616956 PSEN2P49810 448 aa8.36□□□□□ -1.07
SEM1-216ENST00000616956 EN1Q05925 392 aaPredicted RBP8.36□□□□□ -1.07
SEM1-216ENST00000616956 POTEEQ6S8J3 1075 aa8.35□□□□□ -1.07
SEM1-216ENST00000616956 C6orf132Q5T0Z8 1188 aa8.34□□□□□ -1.07
SEM1-216ENST00000616956 ANKRD13DQ6ZTN6 518 aa8.34□□□□□ -1.07
SEM1-216ENST00000616956 PRIM1P49642 420 aaKnown RBP8.33□□□□□ -1.08
SEM1-216ENST00000616956 LSM11P83369 360 aaKnown RBP eCLIP8.33□□□□□ -1.08
SEM1-216ENST00000616956 TSR1Q2NL82 804 aaKnown RBP8.33□□□□□ -1.08
SEM1-216ENST00000616956 KRTAP3-3Q9BYR6 98 aa8.33□□□□□ -1.08
SEM1-216ENST00000616956 KRTAP3-2Q9BYR7 98 aa8.33□□□□□ -1.08
SEM1-216ENST00000616956 NUTM2FA1L443 756 aa8.31□□□□□ -1.08
SEM1-216ENST00000616956 DMRTA1Q5VZB9 504 aa8.31□□□□□ -1.08
SEM1-216ENST00000616956 PPP1R3GB7ZBB8 358 aa8.3□□□□□ -1.08
SEM1-216ENST00000616956 COL9A1P20849 921 aa8.3□□□□□ -1.08
SEM1-216ENST00000616956 RBM26Q5T8P6 1007 aaKnown RBP8.3□□□□□ -1.08
SEM1-216ENST00000616956 BCANQ96GW7 911 aa8.29□□□□□ -1.08
SEM1-216ENST00000616956 CDHR5Q9HBB8 845 aa8.29□□□□□ -1.08
SEM1-216ENST00000616956 ADGRD1Q6QNK2 874 aa8.26□□□□□ -1.09
SEM1-216ENST00000616956 CERKQ8TCT0 537 aa8.26□□□□□ -1.09
SEM1-216ENST00000616956 ZBED2Q9BTP6 218 aa8.26□□□□□ -1.09
SEM1-216ENST00000616956 PROX2Q3B8N5 592 aa8.25□□□□□ -1.09
SEM1-216ENST00000616956 STAC3Q96MF2 364 aa8.25□□□□□ -1.09
SEM1-216ENST00000616956 VPS9D1Q9Y2B5 631 aa8.25□□□□□ -1.09
SEM1-216ENST00000616956 TK2O00142 265 aa8.24□□□□□ -1.09
SEM1-216ENST00000616956 GPIHBP1Q8IV16 184 aa8.24□□□□□ -1.09
SEM1-216ENST00000616956 FCHSD2O94868 740 aa8.23□□□□□ -1.09
SEM1-216ENST00000616956 PRSS12P56730 875 aa8.23□□□□□ -1.09
SEM1-216ENST00000616956 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.23□□□□□ -1.09
SEM1-216ENST00000616956 CDCA7LQ96GN5 454 aa8.23□□□□□ -1.09
SEM1-216ENST00000616956 PTGDRQ13258 359 aa8.22□□□□□ -1.09
SEM1-216ENST00000616956 LMOD2Q6P5Q4 547 aa8.22□□□□□ -1.09
SEM1-216ENST00000616956 SLC4A5Q9BY07 1137 aa8.22□□□□□ -1.09
SEM1-216ENST00000616956 NPDC1Q9NQX5 325 aaPredicted RBP8.22□□□□□ -1.09
SEM1-216ENST00000616956 TRIM6-TRIM34B2RNG4 842 aa8.21□□□□□ -1.1
SEM1-216ENST00000616956 PACS2Q86VP3 889 aa8.21□□□□□ -1.1
SEM1-216ENST00000616956 KIAA1468Q9P260 1216 aa8.21□□□□□ -1.1
SEM1-216ENST00000616956 SPNS2Q8IVW8 549 aa8.2□□□□□ -1.1
SEM1-216ENST00000616956 PADI6Q6TGC4 694 aa8.19□□□□□ -1.1
SEM1-216ENST00000616956 NBPF3Q9H094 633 aa8.19□□□□□ -1.1
SEM1-216ENST00000616956 RABGEF1Q9UJ41 708 aa8.19□□□□□ -1.1
SEM1-216ENST00000616956 TSKSQ9UJT2 592 aa8.19□□□□□ -1.1
SEM1-216ENST00000616956 ONECUT3O60422 494 aaPredicted RBP8.18□□□□□ -1.1
SEM1-216ENST00000616956 MRPL50Q8N5N7 158 aaKnown RBP8.18□□□□□ -1.1
SEM1-216ENST00000616956 GOLGA8CPA6NN73 597 aa8.17□□□□□ -1.1
SEM1-216ENST00000616956 HRO43593 1189 aa8.17□□□□□ -1.1
SEM1-216ENST00000616956 HIC1Q14526 733 aa8.17□□□□□ -1.1
SEM1-216ENST00000616956 RBM27Q9P2N5 1060 aaKnown RBP8.17□□□□□ -1.1
SEM1-216ENST00000616956 SEPT9Q9UHD8 586 aaPredicted RBP8.17□□□□□ -1.1
SEM1-216ENST00000616956 FAM198AQ9UFP1 575 aa8.16□□□□□ -1.1
SEM1-216ENST00000616956 MYT1LQ9UL68 1186 aa8.16□□□□□ -1.1
SEM1-216ENST00000616956 NBPF26B4DH59 902 aa8.15□□□□□ -1.1
SEM1-216ENST00000616956 BHMG1C9JSJ3 638 aaPredicted RBP8.15□□□□□ -1.1
SEM1-216ENST00000616956 SMAPO00193 183 aa8.15□□□□□ -1.1
SEM1-216ENST00000616956 GNPATO15228 680 aa8.15□□□□□ -1.1
SEM1-216ENST00000616956 PLSCR2Q9NRY7 297 aa8.15□□□□□ -1.1
SEM1-216ENST00000616956 PNMA3Q9UL41 463 aa8.15□□□□□ -1.1
SEM1-216ENST00000616956 GPR37O15354 613 aa8.14□□□□□ -1.11
SEM1-216ENST00000616956 NUDT18Q6ZVK8 323 aa8.14□□□□□ -1.11
SEM1-216ENST00000616956 TATDN2Q93075 761 aa8.14□□□□□ -1.11
SEM1-216ENST00000616956 FECHP22830 423 aa8.12□□□□□ -1.11
SEM1-216ENST00000616956 MMRN1Q13201 1228 aa8.12□□□□□ -1.11
SEM1-216ENST00000616956 FAM161AQ3B820 660 aa8.12□□□□□ -1.11
SEM1-216ENST00000616956 LAPTM4BQ86VI4 370 aa8.12□□□□□ -1.11
SEM1-216ENST00000616956 TTC13Q8NBP0 860 aa8.12□□□□□ -1.11
SEM1-216ENST00000616956 C3orf80F5H4A9 247 aa8.11□□□□□ -1.11
SEM1-216ENST00000616956 FAM98CQ17RN3 349 aaKnown RBP8.11□□□□□ -1.11
SEM1-216ENST00000616956 ZC3H15Q8WU90 426 aaKnown RBP8.11□□□□□ -1.11
SEM1-216ENST00000616956 RNF166Q96A37 237 aaPredicted RBP8.11□□□□□ -1.11
SEM1-216ENST00000616956 KCTD12Q96CX2 325 aaKnown RBP8.11□□□□□ -1.11
SEM1-216ENST00000616956 KRI1Q8N9T8 703 aaKnown RBP8.1□□□□□ -1.11
SEM1-216ENST00000616956 RBM46Q8TBY0 533 aaKnown RBP8.1□□□□□ -1.11
SEM1-216ENST00000616956 WNT2BQ93097 391 aa8.1□□□□□ -1.11
SEM1-216ENST00000616956 ADGRG1Q9Y653 693 aa8.1□□□□□ -1.11
SEM1-216ENST00000616956 ANKK1Q8NFD2 765 aa8.09□□□□□ -1.11
SEM1-216ENST00000616956 ZFRQ96KR1 1074 aaKnown RBP8.09□□□□□ -1.11
SEM1-216ENST00000616956 OATP04181 439 aa8.08□□□□□ -1.12
SEM1-216ENST00000616956 HDGFP51858 240 aaKnown RBP8.08□□□□□ -1.12
SEM1-216ENST00000616956 MAP2K5Q13163 448 aa8.07□□□□□ -1.12
SEM1-216ENST00000616956 EYA1Q99502 592 aa8.06□□□□□ -1.12
SEM1-216ENST00000616956 RNF40O75150 1001 aa8.05□□□□□ -1.12
SEM1-216ENST00000616956 ZMYND10O75800 440 aa8.05□□□□□ -1.12
SEM1-216ENST00000616956 SAMD7Q7Z3H4 446 aa8.05□□□□□ -1.12
SEM1-216ENST00000616956 LRCH3Q96II8 777 aa8.05□□□□□ -1.12
SEM1-216ENST00000616956 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.05□□□□□ -1.12
SEM1-216ENST00000616956 MINK1Q8N4C8 1332 aaPredicted RBP8.04□□□□□ -1.12
SEM1-216ENST00000616956 RCCD1A6NED2 376 aa8.04□□□□□ -1.12
SEM1-216ENST00000616956 IRF6O14896 467 aa8.04□□□□□ -1.12
SEM1-216ENST00000616956 DNAJB2P25686 324 aa8.04□□□□□ -1.12
SEM1-216ENST00000616956 BCAMP50895 628 aa8.04□□□□□ -1.12
SEM1-216ENST00000616956 PTPN5P54829 565 aa8.04□□□□□ -1.12
SEM1-216ENST00000616956 BARGINQ6ZT62 677 aa8.04□□□□□ -1.12
SEM1-216ENST00000616956 METTL3Q86U44 580 aaKnown RBP8.04□□□□□ -1.12
SEM1-216ENST00000616956 PXYLP1Q8TE99 480 aa8.04□□□□□ -1.12
SEM1-216ENST00000616956 SWT1Q5T5J6 900 aaKnown RBP8.03□□□□□ -1.12
SEM1-216ENST00000616956 THSD4Q6ZMP0 1018 aa8.03□□□□□ -1.12
SEM1-216ENST00000616956 CCDC102AQ96A19 550 aa8.03□□□□□ -1.12
SEM1-216ENST00000616956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.02□□□□□ -1.13
SEM1-216ENST00000616956 SOWAHBA6NEL2 793 aa8.02□□□□□ -1.13
SEM1-216ENST00000616956 SLC4A3P48751 1232 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms