RNA–Protein interactions for RNA: ENST00000616956.1

SEM1-216, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3

Gene SEM1, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-216ENST00000616956 AEBP2Q6ZN18 517 aaPredicted RBP19.05■□□□□ 0.64
SEM1-216ENST00000616956 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
SEM1-216ENST00000616956 PHF23Q9BUL5 403 aaPredicted RBP16.32■□□□□ 0.2
SEM1-216ENST00000616956 SENP3Q9H4L4 574 aaPredicted RBP16.22■□□□□ 0.19
SEM1-216ENST00000616956 PLPPR3Q6T4P5 718 aa15.09■□□□□ 0.01
SEM1-216ENST00000616956 FOXD1Q16676 465 aa15.04■□□□□ -0
SEM1-216ENST00000616956 ADRA2BP18089 450 aa14.45□□□□□ -0.1
SEM1-216ENST00000616956 PPP6R1Q9UPN7 881 aa14.43□□□□□ -0.1
SEM1-216ENST00000616956 PIAS4Q8N2W9 510 aaPredicted RBP14.21□□□□□ -0.13
SEM1-216ENST00000616956 MSH5O43196 834 aa13.91□□□□□ -0.18
SEM1-216ENST00000616956 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
SEM1-216ENST00000616956 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
SEM1-216ENST00000616956 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
SEM1-216ENST00000616956 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.33
SEM1-216ENST00000616956 KCNA4P22459 653 aa12.93□□□□□ -0.34
SEM1-216ENST00000616956 CNKSR2Q8WXI2 1034 aa12.92□□□□□ -0.34
SEM1-216ENST00000616956 DMRT2Q9Y5R5 561 aa12.91□□□□□ -0.34
SEM1-216ENST00000616956 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
SEM1-216ENST00000616956 NPM3O75607 178 aaKnown RBP12.73□□□□□ -0.37
SEM1-216ENST00000616956 RNF216Q9NWF9 866 aaPredicted RBP12.66□□□□□ -0.38
SEM1-216ENST00000616956 HOXD11P31277 338 aaPredicted RBP12.6□□□□□ -0.39
SEM1-216ENST00000616956 DCAF8L1A6NGE4 600 aa12.48□□□□□ -0.41
SEM1-216ENST00000616956 SLC4A1APQ9BWU0 796 aaKnown RBP12.32□□□□□ -0.44
SEM1-216ENST00000616956 DNAJC5BQ9UF47 199 aa12.27□□□□□ -0.45
SEM1-216ENST00000616956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.11□□□□□ -0.47
SEM1-216ENST00000616956 SLC4A2P04920 1241 aa12.01□□□□□ -0.49
SEM1-216ENST00000616956 EHMT2Q96KQ7 1210 aa11.96□□□□□ -0.49
SEM1-216ENST00000616956 FOXD4L1Q9NU39 408 aa11.91□□□□□ -0.5
SEM1-216ENST00000616956 RNF39Q9H2S5 420 aa11.89□□□□□ -0.51
SEM1-216ENST00000616956 ZBTB22O15209 634 aa11.87□□□□□ -0.51
SEM1-216ENST00000616956 U3KPZ7 1027 aaPredicted RBP11.84□□□□□ -0.51
SEM1-216ENST00000616956 MYCNP04198 464 aaPredicted RBP11.78□□□□□ -0.52
SEM1-216ENST00000616956 CSRNP3Q8WYN3 585 aa11.77□□□□□ -0.53
SEM1-216ENST00000616956 C1QBPQ07021 282 aaKnown RBP11.76□□□□□ -0.53
SEM1-216ENST00000616956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.71□□□□□ -0.53
SEM1-216ENST00000616956 HNRNPUL2Q1KMD3 747 aaKnown RBP11.71□□□□□ -0.53
SEM1-216ENST00000616956 CACNB1Q02641 598 aaPredicted RBP11.68□□□□□ -0.54
SEM1-216ENST00000616956 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
SEM1-216ENST00000616956 APLP2Q06481 763 aa11.62□□□□□ -0.55
SEM1-216ENST00000616956 CAPN15O75808 1086 aa11.56□□□□□ -0.56
SEM1-216ENST00000616956 SPINK5Q9NQ38 1064 aaPredicted RBP11.55□□□□□ -0.56
SEM1-216ENST00000616956 TRHP20396 242 aaPredicted RBP11.49□□□□□ -0.57
SEM1-216ENST00000616956 ATXN8OSP0DMR3 200 aa11.48□□□□□ -0.57
SEM1-216ENST00000616956 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
SEM1-216ENST00000616956 ATF5Q9Y2D1 282 aaPredicted RBP11.45□□□□□ -0.58
SEM1-216ENST00000616956 ABCB7O75027 752 aa11.32□□□□□ -0.6
SEM1-216ENST00000616956 DSG3P32926 999 aa11.3□□□□□ -0.6
SEM1-216ENST00000616956 POLA2Q14181 598 aa11.26□□□□□ -0.61
SEM1-216ENST00000616956 ZBTB12Q9Y330 459 aaPredicted RBP11.07□□□□□ -0.64
SEM1-216ENST00000616956 FBLN2P98095 1184 aa11.03□□□□□ -0.64
SEM1-216ENST00000616956 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
SEM1-216ENST00000616956 OSCARQ8IYS5 282 aa10.88□□□□□ -0.67
SEM1-216ENST00000616956 RBM42Q9BTD8 480 aaKnown RBP10.8□□□□□ -0.68
SEM1-216ENST00000616956 SPDYE2BA6NHP3 402 aa10.75□□□□□ -0.69
SEM1-216ENST00000616956 SPDYE6P0CI01 402 aa10.75□□□□□ -0.69
SEM1-216ENST00000616956 SPDYE2Q495Y8 402 aa10.75□□□□□ -0.69
SEM1-216ENST00000616956 ZNF692Q9BU19 519 aaPredicted RBP10.74□□□□□ -0.69
SEM1-216ENST00000616956 SPDYE4A6NLX3 237 aa10.72□□□□□ -0.69
SEM1-216ENST00000616956 FKBP8Q14318 412 aa10.7□□□□□ -0.7
SEM1-216ENST00000616956 AKT1S1Q96B36 256 aa10.65□□□□□ -0.7
SEM1-216ENST00000616956 SSUH2Q9Y2M2 353 aa10.63□□□□□ -0.71
SEM1-216ENST00000616956 PABPN1Q86U42 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
SEM1-216ENST00000616956 REM2Q8IYK8 340 aaPredicted RBP10.54□□□□□ -0.72
SEM1-216ENST00000616956 SPDYE1Q8NFV5 336 aaPredicted RBP10.47□□□□□ -0.73
SEM1-216ENST00000616956 CLEC11AQ9Y240 323 aa10.47□□□□□ -0.73
SEM1-216ENST00000616956 PROM2Q8N271 834 aa10.45□□□□□ -0.74
SEM1-216ENST00000616956 PITPNM1O00562 1244 aa10.43□□□□□ -0.74
SEM1-216ENST00000616956 STAG3Q9UJ98 1225 aa10.4□□□□□ -0.74
SEM1-216ENST00000616956 CHRDL2Q6WN34 429 aa10.37□□□□□ -0.75
SEM1-216ENST00000616956 PRR29P0C7W0 189 aa10.34□□□□□ -0.75
SEM1-216ENST00000616956 FBXO3Q9UK99 471 aa10.33□□□□□ -0.76
SEM1-216ENST00000616956 FXR2P51116 673 aaKnown RBP eCLIP10.21□□□□□ -0.77
SEM1-216ENST00000616956 PIP4P2Q8N4L2 257 aa10.21□□□□□ -0.77
SEM1-216ENST00000616956 MIER1Q8N108 512 aa10.2□□□□□ -0.78
SEM1-216ENST00000616956 PLCD3Q8N3E9 789 aa10.2□□□□□ -0.78
SEM1-216ENST00000616956 PRKAR2AP13861 404 aaKnown RBP10.19□□□□□ -0.78
SEM1-216ENST00000616956 PLEKHG5O94827 1062 aa10.18□□□□□ -0.78
SEM1-216ENST00000616956 CHADLQ6NUI6 762 aa10.18□□□□□ -0.78
SEM1-216ENST00000616956 VASPP50552 380 aaPredicted RBP10.17□□□□□ -0.78
SEM1-216ENST00000616956 CREBZFQ9NS37 354 aa10.15□□□□□ -0.78
SEM1-216ENST00000616956 POTEHQ6S545 545 aa10.1□□□□□ -0.79
SEM1-216ENST00000616956 KLHL34Q8N239 644 aa10.08□□□□□ -0.8
SEM1-216ENST00000616956 ZBTB47Q9UFB7 747 aaPredicted RBP10.06□□□□□ -0.8
SEM1-216ENST00000616956 FARP1Q9Y4F1 1045 aaPredicted RBP10.06□□□□□ -0.8
SEM1-216ENST00000616956 NPM1P06748 294 aaKnown RBP eCLIP10.03□□□□□ -0.8
SEM1-216ENST00000616956 IFNLR1Q8IU57 520 aaPredicted RBP10.01□□□□□ -0.81
SEM1-216ENST00000616956 MNX1P50219 401 aaPredicted RBP10□□□□□ -0.81
SEM1-216ENST00000616956 HAX1O00165 279 aa9.96□□□□□ -0.82
SEM1-216ENST00000616956 SPOCK2Q92563 424 aa9.93□□□□□ -0.82
SEM1-216ENST00000616956 CD44P16070 742 aaKnown RBP9.9□□□□□ -0.82
SEM1-216ENST00000616956 PAK3O75914 559 aaPredicted RBP9.89□□□□□ -0.83
SEM1-216ENST00000616956 NUBP1P53384 320 aa9.88□□□□□ -0.83
SEM1-216ENST00000616956 TSPYL2Q9H2G4 693 aaPredicted RBP9.88□□□□□ -0.83
SEM1-216ENST00000616956 C19orf67A6NJJ6 358 aa9.87□□□□□ -0.83
SEM1-216ENST00000616956 RASEFQ8IZ41 740 aa9.87□□□□□ -0.83
SEM1-216ENST00000616956 FAM212AQ96EL1 285 aa9.86□□□□□ -0.83
SEM1-216ENST00000616956 DCAF8Q5TAQ9 597 aa9.84□□□□□ -0.83
SEM1-216ENST00000616956 ZRANB1Q9UGI0 708 aa9.84□□□□□ -0.83
SEM1-216ENST00000616956 CIZ1Q9ULV3 898 aaPredicted RBP9.83□□□□□ -0.84
SEM1-216ENST00000616956 EVX2Q03828 476 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms