RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 TRAPPC8Q9Y2L5 1435 aa15.9■□□□□ 0.14
PCDHGA9-202ENST00000616887 KDM5DQ9BY66 1539 aa15.89■□□□□ 0.13
PCDHGA9-202ENST00000616887 FAM135AQ9P2D6 1515 aa15.88■□□□□ 0.13
PCDHGA9-202ENST00000616887 AFAP1Q8N556 730 aa15.87■□□□□ 0.13
PCDHGA9-202ENST00000616887 MAP3K4Q9Y6R4 1608 aa15.86■□□□□ 0.13
PCDHGA9-202ENST00000616887 TSPOAP1O95153 1857 aa15.86■□□□□ 0.13
PCDHGA9-202ENST00000616887 KDM2AQ9Y2K7 1162 aa15.86■□□□□ 0.13
PCDHGA9-202ENST00000616887 CD109Q6YHK3 1445 aa15.85■□□□□ 0.13
PCDHGA9-202ENST00000616887 ABCC1P33527 1531 aa15.85■□□□□ 0.13
PCDHGA9-202ENST00000616887 MAST1Q9Y2H9 1570 aa15.84■□□□□ 0.13
PCDHGA9-202ENST00000616887 FKBP8Q14318 412 aa15.84■□□□□ 0.13
PCDHGA9-202ENST00000616887 SPATA31E1Q6ZUB1 1445 aa15.84■□□□□ 0.13
PCDHGA9-202ENST00000616887 MSH5O43196 834 aa15.83■□□□□ 0.13
PCDHGA9-202ENST00000616887 CCDC7Q96M83 1385 aa15.82■□□□□ 0.12
PCDHGA9-202ENST00000616887 KIF7Q2M1P5 1343 aa15.81■□□□□ 0.12
PCDHGA9-202ENST00000616887 PLXNC1O60486 1568 aa15.81■□□□□ 0.12
PCDHGA9-202ENST00000616887 DCAF11Q8TEB1 546 aa15.81■□□□□ 0.12
PCDHGA9-202ENST00000616887 PPRC1Q5VV67 1664 aaKnown RBP15.81■□□□□ 0.12
PCDHGA9-202ENST00000616887 PLA2R1Q13018 1463 aa15.8■□□□□ 0.12
PCDHGA9-202ENST00000616887 RGL3Q3MIN7 710 aa15.8■□□□□ 0.12
PCDHGA9-202ENST00000616887 USP47Q96K76 1375 aa15.8■□□□□ 0.12
PCDHGA9-202ENST00000616887 FANCAO15360 1455 aa15.8■□□□□ 0.12
PCDHGA9-202ENST00000616887 CFAP74Q9C0B2 1584 aa15.8■□□□□ 0.12
PCDHGA9-202ENST00000616887 UNC13BO14795 1591 aa15.79■□□□□ 0.12
PCDHGA9-202ENST00000616887 CCER2I3L3R5 266 aa15.79■□□□□ 0.12
PCDHGA9-202ENST00000616887 POLR3GLQ9BT43 218 aa15.79■□□□□ 0.12
PCDHGA9-202ENST00000616887 SPAG9O60271 1321 aaKnown RBP15.79■□□□□ 0.12
PCDHGA9-202ENST00000616887 CNTLNQ9NXG0 1405 aa15.78■□□□□ 0.12
PCDHGA9-202ENST00000616887 DUOX2Q9NRD8 1548 aa15.78■□□□□ 0.12
PCDHGA9-202ENST00000616887 CNGB1Q14028 1251 aaPredicted RBP15.77■□□□□ 0.12
PCDHGA9-202ENST00000616887 CCDC144AA2RUR9 1427 aa15.77■□□□□ 0.11
PCDHGA9-202ENST00000616887 CCDC184Q52MB2 194 aa15.76■□□□□ 0.11
PCDHGA9-202ENST00000616887 ZFYVE16Q7Z3T8 1539 aa15.76■□□□□ 0.11
PCDHGA9-202ENST00000616887 RTEL1-TNFRSF6BF6WH68 1400 aa15.75■□□□□ 0.11
PCDHGA9-202ENST00000616887 ERBINQ96RT1 1412 aa15.75■□□□□ 0.11
PCDHGA9-202ENST00000616887 CARD11Q9BXL7 1154 aa15.75■□□□□ 0.11
PCDHGA9-202ENST00000616887 MYT1LQ9UL68 1186 aa15.75■□□□□ 0.11
PCDHGA9-202ENST00000616887 UHRF1BP1Q6BDS2 1440 aa15.75■□□□□ 0.11
PCDHGA9-202ENST00000616887 BCORL1Q5H9F3 1711 aa15.74■□□□□ 0.11
PCDHGA9-202ENST00000616887 IQGAP3Q86VI3 1631 aa15.73■□□□□ 0.11
PCDHGA9-202ENST00000616887 ADGRL1O94910 1474 aa15.73■□□□□ 0.11
PCDHGA9-202ENST00000616887 ANO8Q9HCE9 1232 aaPredicted RBP15.73■□□□□ 0.11
PCDHGA9-202ENST00000616887 RALGAPBQ86X10 1494 aa15.73■□□□□ 0.11
PCDHGA9-202ENST00000616887 KDM5CP41229 1560 aa15.73■□□□□ 0.11
PCDHGA9-202ENST00000616887 SCAPERQ9BY12 1400 aa15.73■□□□□ 0.11
PCDHGA9-202ENST00000616887 MAGI2Q86UL8 1455 aa15.73■□□□□ 0.11
PCDHGA9-202ENST00000616887 NEO1Q92859 1461 aa15.7■□□□□ 0.1
PCDHGA9-202ENST00000616887 NBPF1Q3BBV0 1214 aa15.7■□□□□ 0.1
PCDHGA9-202ENST00000616887 A2MP01023 1474 aa15.7■□□□□ 0.1
PCDHGA9-202ENST00000616887 ST20-MTHFSA0A0A6YYL1 179 aa15.7■□□□□ 0.1
PCDHGA9-202ENST00000616887 PRKRIP1Q9H875 184 aaPredicted RBP15.69■□□□□ 0.1
PCDHGA9-202ENST00000616887 ROCK2O75116 1388 aaKnown RBP15.69■□□□□ 0.1
PCDHGA9-202ENST00000616887 ATP7AQ04656 1500 aa15.68■□□□□ 0.1
PCDHGA9-202ENST00000616887 PRAG1Q86YV5 1406 aa15.67■□□□□ 0.1
PCDHGA9-202ENST00000616887 ZNF518AQ6AHZ1 1483 aa15.67■□□□□ 0.1
PCDHGA9-202ENST00000616887 KIF3BO15066 747 aa15.67■□□□□ 0.1
PCDHGA9-202ENST00000616887 NEFLP07196 543 aa15.66■□□□□ 0.1
PCDHGA9-202ENST00000616887 DEKP35659 375 aaKnown RBP15.66■□□□□ 0.1
PCDHGA9-202ENST00000616887 INO80Q9ULG1 1556 aaPredicted RBP15.66■□□□□ 0.1
PCDHGA9-202ENST00000616887 COL17A1Q9UMD9 1497 aaPredicted RBP15.66■□□□□ 0.1
PCDHGA9-202ENST00000616887 HNRNPUQ00839 825 aaKnown RBP eCLIP15.64■□□□□ 0.09
PCDHGA9-202ENST00000616887 POLR1AO95602 1720 aaPredicted RBP15.63■□□□□ 0.09
PCDHGA9-202ENST00000616887 E9PCH4 1651 aa15.63■□□□□ 0.09
PCDHGA9-202ENST00000616887 DHX29Q7Z478 1369 aaKnown RBP15.63■□□□□ 0.09
PCDHGA9-202ENST00000616887 POGZQ7Z3K3 1410 aa15.63■□□□□ 0.09
PCDHGA9-202ENST00000616887 ATP10AO60312 1499 aa15.62■□□□□ 0.09
PCDHGA9-202ENST00000616887 RAPGEF3O95398 923 aa15.62■□□□□ 0.09
PCDHGA9-202ENST00000616887 DAXXQ9UER7 740 aaPredicted RBP15.62■□□□□ 0.09
PCDHGA9-202ENST00000616887 FAM9BQ8IZU0 186 aa15.61■□□□□ 0.09
PCDHGA9-202ENST00000616887 TRPM1Q7Z4N2 1603 aa15.61■□□□□ 0.09
PCDHGA9-202ENST00000616887 MRS2Q9HD23 443 aa15.61■□□□□ 0.09
PCDHGA9-202ENST00000616887 FANCIQ9NVI1 1328 aa15.6■□□□□ 0.09
PCDHGA9-202ENST00000616887 MLH3Q9UHC1 1453 aa15.6■□□□□ 0.09
PCDHGA9-202ENST00000616887 RICTORQ6R327 1708 aa15.59■□□□□ 0.09
PCDHGA9-202ENST00000616887 DEPDC5O75140 1603 aa15.59■□□□□ 0.09
PCDHGA9-202ENST00000616887 KIDINS220Q9ULH0 1771 aa15.59■□□□□ 0.09
PCDHGA9-202ENST00000616887 EIF2AK4Q9P2K8 1649 aaKnown RBP15.58■□□□□ 0.09
PCDHGA9-202ENST00000616887 FRMPD1Q5SYB0 1578 aa15.58■□□□□ 0.08
PCDHGA9-202ENST00000616887 UGGT1Q9NYU2 1555 aa15.58■□□□□ 0.08
PCDHGA9-202ENST00000616887 MROH1Q8NDA8 1641 aa15.58■□□□□ 0.08
PCDHGA9-202ENST00000616887 HECW2Q9P2P5 1572 aa15.57■□□□□ 0.08
PCDHGA9-202ENST00000616887 SENP3-EIF4A1A0A087X0R7 540 aa15.56■□□□□ 0.08
PCDHGA9-202ENST00000616887 CLTCL1P53675 1640 aa15.56■□□□□ 0.08
PCDHGA9-202ENST00000616887 TRPM2O94759 1503 aa15.55■□□□□ 0.08
PCDHGA9-202ENST00000616887 VWDEQ8N2E2 1590 aa15.54■□□□□ 0.08
PCDHGA9-202ENST00000616887 KANK1Q14678 1352 aa15.54■□□□□ 0.08
PCDHGA9-202ENST00000616887 GPRASP1Q5JY77 1395 aa15.54■□□□□ 0.08
PCDHGA9-202ENST00000616887 PTPRTO14522 1441 aa15.54■□□□□ 0.08
PCDHGA9-202ENST00000616887 PRDM15P57071 1507 aaPredicted RBP15.54■□□□□ 0.08
PCDHGA9-202ENST00000616887 SALL2Q9Y467 1007 aaPredicted RBP15.54■□□□□ 0.08
PCDHGA9-202ENST00000616887 DISP3Q9P2K9 1392 aa15.53■□□□□ 0.08
PCDHGA9-202ENST00000616887 SPHKAPQ2M3C7 1700 aa15.53■□□□□ 0.08
PCDHGA9-202ENST00000616887 TET3O43151 1660 aa15.53■□□□□ 0.08
PCDHGA9-202ENST00000616887 TESK2Q96S53 571 aa15.53■□□□□ 0.08
PCDHGA9-202ENST00000616887 GGT6Q6P531 493 aa15.52■□□□□ 0.08
PCDHGA9-202ENST00000616887 ARID4BQ4LE39 1312 aaPredicted RBP15.52■□□□□ 0.07
PCDHGA9-202ENST00000616887 ZMYM4Q5VZL5 1548 aa15.51■□□□□ 0.07
PCDHGA9-202ENST00000616887 MADDQ8WXG6 1647 aa15.49■□□□□ 0.07
PCDHGA9-202ENST00000616887 YEATS2Q9ULM3 1422 aa15.48■□□□□ 0.07
PCDHGA9-202ENST00000616887 EFCAB6Q5THR3 1501 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms