RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 HECW1Q76N89 1606 aa18.71■□□□□ 0.59
EPHB4-210ENST00000616502 GSE1Q14687 1217 aa18.7■□□□□ 0.58
EPHB4-210ENST00000616502 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.7■□□□□ 0.58
EPHB4-210ENST00000616502 ABCA5Q8WWZ7 1642 aa18.69■□□□□ 0.58
EPHB4-210ENST00000616502 SMG6Q86US8 1419 aaKnown RBP18.69■□□□□ 0.58
EPHB4-210ENST00000616502 USP35Q9P2H5 1018 aa18.69■□□□□ 0.58
EPHB4-210ENST00000616502 TARBP1Q13395 1621 aaKnown RBP18.68■□□□□ 0.58
EPHB4-210ENST00000616502 OSCARQ8IYS5 282 aa18.68■□□□□ 0.58
EPHB4-210ENST00000616502 EIF4G3O43432 1585 aaKnown RBP18.67■□□□□ 0.58
EPHB4-210ENST00000616502 MAP3K1Q13233 1512 aa18.67■□□□□ 0.58
EPHB4-210ENST00000616502 RAPGEF3O95398 923 aa18.67■□□□□ 0.58
EPHB4-210ENST00000616502 RALBP1Q15311 655 aa18.66■□□□□ 0.58
EPHB4-210ENST00000616502 DISP1Q96F81 1524 aa18.66■□□□□ 0.58
EPHB4-210ENST00000616502 ARID4BQ4LE39 1312 aaPredicted RBP18.66■□□□□ 0.58
EPHB4-210ENST00000616502 BACH2Q9BYV9 841 aa18.66■□□□□ 0.58
EPHB4-210ENST00000616502 MYBBP1AQ9BQG0 1328 aaKnown RBP18.66■□□□□ 0.58
EPHB4-210ENST00000616502 TRAK1Q9UPV9 953 aa18.65■□□□□ 0.58
EPHB4-210ENST00000616502 C9orf84Q5VXU9 1444 aa18.65■□□□□ 0.58
EPHB4-210ENST00000616502 NFKBIBQ15653 356 aa18.65■□□□□ 0.58
EPHB4-210ENST00000616502 NLRP13Q86W25 1043 aa18.65■□□□□ 0.58
EPHB4-210ENST00000616502 ADAMTS12P58397 1594 aa18.65■□□□□ 0.58
EPHB4-210ENST00000616502 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.65■□□□□ 0.58
EPHB4-210ENST00000616502 SLKQ9H2G2 1235 aaPredicted RBP18.64■□□□□ 0.58
EPHB4-210ENST00000616502 ARHGAP5Q13017 1502 aa18.64■□□□□ 0.57
EPHB4-210ENST00000616502 CAMSAP2Q08AD1 1489 aa18.63■□□□□ 0.57
EPHB4-210ENST00000616502 ESF1Q9H501 851 aaKnown RBP18.63■□□□□ 0.57
EPHB4-210ENST00000616502 KNSTRNQ9Y448 316 aa18.63■□□□□ 0.57
EPHB4-210ENST00000616502 KTN1Q86UP2 1357 aaKnown RBP18.63■□□□□ 0.57
EPHB4-210ENST00000616502 NCOA1Q15788 1441 aa18.63■□□□□ 0.57
EPHB4-210ENST00000616502 CCDC144AA2RUR9 1427 aa18.62■□□□□ 0.57
EPHB4-210ENST00000616502 ATP10BO94823 1461 aa18.62■□□□□ 0.57
EPHB4-210ENST00000616502 SPRYD3Q8NCJ5 442 aa18.62■□□□□ 0.57
EPHB4-210ENST00000616502 PANK3Q9H999 370 aa18.62■□□□□ 0.57
EPHB4-210ENST00000616502 TMEM132EQ6IEE7 984 aa18.62■□□□□ 0.57
EPHB4-210ENST00000616502 MIA2Q96PC5 1412 aa18.61■□□□□ 0.57
EPHB4-210ENST00000616502 FRAT1Q92837 279 aaPredicted RBP18.61■□□□□ 0.57
EPHB4-210ENST00000616502 GPATCH8Q9UKJ3 1502 aaKnown RBP18.61■□□□□ 0.57
EPHB4-210ENST00000616502 UGGT2Q9NYU1 1516 aa18.61■□□□□ 0.57
EPHB4-210ENST00000616502 UPF2Q9HAU5 1272 aaKnown RBP18.61■□□□□ 0.57
EPHB4-210ENST00000616502 ANKRD30BQ9BXX2 1392 aa18.61■□□□□ 0.57
EPHB4-210ENST00000616502 MS4A1P11836 297 aa18.6■□□□□ 0.57
EPHB4-210ENST00000616502 MAGI1Q96QZ7 1491 aaPredicted RBP18.6■□□□□ 0.57
EPHB4-210ENST00000616502 PBRM1Q86U86 1689 aa18.59■□□□□ 0.57
EPHB4-210ENST00000616502 CCDC146Q8IYE0 955 aa18.59■□□□□ 0.57
EPHB4-210ENST00000616502 KDM6BO15054 1643 aa18.58■□□□□ 0.57
EPHB4-210ENST00000616502 WASHC2CQ9Y4E1 1318 aa18.58■□□□□ 0.56
EPHB4-210ENST00000616502 NUTM2FA1L443 756 aa18.57■□□□□ 0.56
EPHB4-210ENST00000616502 SCAPERQ9BY12 1400 aa18.57■□□□□ 0.56
EPHB4-210ENST00000616502 PDE3BQ13370 1112 aa18.57■□□□□ 0.56
EPHB4-210ENST00000616502 TMF1P82094 1093 aa18.57■□□□□ 0.56
EPHB4-210ENST00000616502 CFAP43Q8NDM7 1665 aa18.56■□□□□ 0.56
EPHB4-210ENST00000616502 SOX12O15370 315 aa18.56■□□□□ 0.56
EPHB4-210ENST00000616502 CFAP70Q5T0N1 1121 aa18.56■□□□□ 0.56
EPHB4-210ENST00000616502 FRAT2O75474 233 aaPredicted RBP18.55■□□□□ 0.56
EPHB4-210ENST00000616502 BECN1Q14457 450 aa18.55■□□□□ 0.56
EPHB4-210ENST00000616502 SLC24A1O60721 1099 aa18.54■□□□□ 0.56
EPHB4-210ENST00000616502 WDR62O43379 1518 aa18.54■□□□□ 0.56
EPHB4-210ENST00000616502 GZF1Q9H116 711 aaPredicted RBP18.54■□□□□ 0.56
EPHB4-210ENST00000616502 KIAA0556O60303 1618 aa18.54■□□□□ 0.56
EPHB4-210ENST00000616502 CEP170Q5SW79 1584 aa18.52■□□□□ 0.55
EPHB4-210ENST00000616502 NAP1L5Q96NT1 182 aaPredicted RBP18.52■□□□□ 0.55
EPHB4-210ENST00000616502 RAPGEF6Q8TEU7 1601 aa18.51■□□□□ 0.55
EPHB4-210ENST00000616502 FAM161AQ3B820 660 aa18.51■□□□□ 0.55
EPHB4-210ENST00000616502 KIAA1107Q9UPP5 1409 aa18.51■□□□□ 0.55
EPHB4-210ENST00000616502 SAMD9Q5K651 1589 aa18.5■□□□□ 0.55
EPHB4-210ENST00000616502 TRHP20396 242 aaPredicted RBP18.5■□□□□ 0.55
EPHB4-210ENST00000616502 C20orf194Q5TEA3 1177 aa18.5■□□□□ 0.55
EPHB4-210ENST00000616502 RSPH4AQ5TD94 716 aa18.5■□□□□ 0.55
EPHB4-210ENST00000616502 KIF14Q15058 1648 aa18.5■□□□□ 0.55
EPHB4-210ENST00000616502 PLEKHH2Q8IVE3 1493 aa18.49■□□□□ 0.55
EPHB4-210ENST00000616502 FAM69CQ0P6D2 419 aa18.48■□□□□ 0.55
EPHB4-210ENST00000616502 SRPK2P78362 688 aaKnown RBP18.47■□□□□ 0.55
EPHB4-210ENST00000616502 CENPQQ7L2Z9 268 aaPredicted RBP18.47■□□□□ 0.55
EPHB4-210ENST00000616502 RRP7AQ9Y3A4 280 aaKnown RBP18.46■□□□□ 0.55
EPHB4-210ENST00000616502 BRD4O60885 1362 aaPredicted RBP18.46■□□□□ 0.55
EPHB4-210ENST00000616502 KANK1Q14678 1352 aa18.46■□□□□ 0.55
EPHB4-210ENST00000616502 POGKQ9P215 609 aa18.46■□□□□ 0.55
EPHB4-210ENST00000616502 GOLGA2Q08379 1002 aa18.46■□□□□ 0.55
EPHB4-210ENST00000616502 HSP90AA1P07900 732 aaKnown RBP18.44■□□□□ 0.54
EPHB4-210ENST00000616502 ADAMTS8Q9UP79 889 aa18.44■□□□□ 0.54
EPHB4-210ENST00000616502 U2SURPO15042 1029 aaKnown RBP18.42■□□□□ 0.54
EPHB4-210ENST00000616502 GLIPR1L2Q4G1C9 344 aa18.42■□□□□ 0.54
EPHB4-210ENST00000616502 ROCK1Q13464 1354 aa18.4■□□□□ 0.54
EPHB4-210ENST00000616502 ERCC6L2Q5T890 1561 aa18.4■□□□□ 0.54
EPHB4-210ENST00000616502 RPRD2Q5VT52 1461 aaKnown RBP18.39■□□□□ 0.54
EPHB4-210ENST00000616502 ZBTB7CA1YPR0 619 aa18.39■□□□□ 0.53
EPHB4-210ENST00000616502 DHX29Q7Z478 1369 aaKnown RBP18.39■□□□□ 0.53
EPHB4-210ENST00000616502 CLUAP1Q96AJ1 413 aa18.38■□□□□ 0.53
EPHB4-210ENST00000616502 LRRIQ1Q96JM4 1722 aa18.38■□□□□ 0.53
EPHB4-210ENST00000616502 RNF123Q5XPI4 1314 aa18.38■□□□□ 0.53
EPHB4-210ENST00000616502 MINK1Q8N4C8 1332 aaPredicted RBP18.37■□□□□ 0.53
EPHB4-210ENST00000616502 NUP160Q12769 1436 aa18.37■□□□□ 0.53
EPHB4-210ENST00000616502 APAF1O14727 1248 aa18.37■□□□□ 0.53
EPHB4-210ENST00000616502 COG6Q9Y2V7 657 aa18.37■□□□□ 0.53
EPHB4-210ENST00000616502 TRAPPC8Q9Y2L5 1435 aa18.36■□□□□ 0.53
EPHB4-210ENST00000616502 BCL2L13Q9BXK5 485 aa18.35■□□□□ 0.53
EPHB4-210ENST00000616502 SYCP2Q9BX26 1530 aa18.35■□□□□ 0.53
EPHB4-210ENST00000616502 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
EPHB4-210ENST00000616502 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.53
EPHB4-210ENST00000616502 SLC12A5Q9H2X9 1139 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms