RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 PLB1Q6P1J6 1458 aa17.51■□□□□ 0.39
PCDHA11-202ENST00000616325 KIAA1107Q9UPP5 1409 aa17.51■□□□□ 0.39
PCDHA11-202ENST00000616325 ARID4BQ4LE39 1312 aaPredicted RBP17.51■□□□□ 0.39
PCDHA11-202ENST00000616325 C20orf194Q5TEA3 1177 aa17.5■□□□□ 0.39
PCDHA11-202ENST00000616325 PANK3Q9H999 370 aa17.5■□□□□ 0.39
PCDHA11-202ENST00000616325 GCC2Q8IWJ2 1684 aa17.49■□□□□ 0.39
PCDHA11-202ENST00000616325 NLRP13Q86W25 1043 aa17.49■□□□□ 0.39
PCDHA11-202ENST00000616325 ABCA5Q8WWZ7 1642 aa17.49■□□□□ 0.39
PCDHA11-202ENST00000616325 ARHGEF11O15085 1522 aa17.49■□□□□ 0.39
PCDHA11-202ENST00000616325 SLKQ9H2G2 1235 aaPredicted RBP17.49■□□□□ 0.39
PCDHA11-202ENST00000616325 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
PCDHA11-202ENST00000616325 PZPP20742 1482 aa17.48■□□□□ 0.39
PCDHA11-202ENST00000616325 SENP3Q9H4L4 574 aaPredicted RBP17.48■□□□□ 0.39
PCDHA11-202ENST00000616325 ROCK1Q13464 1354 aa17.48■□□□□ 0.39
PCDHA11-202ENST00000616325 RALBP1Q15311 655 aa17.47■□□□□ 0.39
PCDHA11-202ENST00000616325 CAMSAP2Q08AD1 1489 aa17.47■□□□□ 0.39
PCDHA11-202ENST00000616325 NUP153P49790 1475 aaKnown RBP17.46■□□□□ 0.39
PCDHA11-202ENST00000616325 CCDC146Q8IYE0 955 aa17.46■□□□□ 0.39
PCDHA11-202ENST00000616325 GLIPR1L2Q4G1C9 344 aa17.46■□□□□ 0.39
PCDHA11-202ENST00000616325 JPH4Q96JJ6 628 aa17.46■□□□□ 0.38
PCDHA11-202ENST00000616325 BCORL1Q5H9F3 1711 aa17.45■□□□□ 0.38
PCDHA11-202ENST00000616325 WDR62O43379 1518 aa17.44■□□□□ 0.38
PCDHA11-202ENST00000616325 POGKQ9P215 609 aa17.44■□□□□ 0.38
PCDHA11-202ENST00000616325 WDR43Q15061 677 aaKnown RBP eCLIP17.43■□□□□ 0.38
PCDHA11-202ENST00000616325 GZF1Q9H116 711 aaPredicted RBP17.43■□□□□ 0.38
PCDHA11-202ENST00000616325 FAM43AQ8N2R8 423 aa17.43■□□□□ 0.38
PCDHA11-202ENST00000616325 SPRYD3Q8NCJ5 442 aa17.43■□□□□ 0.38
PCDHA11-202ENST00000616325 ADAMTS8Q9UP79 889 aa17.41■□□□□ 0.38
PCDHA11-202ENST00000616325 KIF21AQ7Z4S6 1674 aa17.4■□□□□ 0.38
PCDHA11-202ENST00000616325 NEUROD2Q15784 382 aa17.4■□□□□ 0.38
PCDHA11-202ENST00000616325 TROQ12816 1431 aaPredicted RBP17.4■□□□□ 0.38
PCDHA11-202ENST00000616325 BRD4O60885 1362 aaPredicted RBP17.39■□□□□ 0.37
PCDHA11-202ENST00000616325 TNNT2P45379 298 aaPredicted RBP17.39■□□□□ 0.37
PCDHA11-202ENST00000616325 RRAGDQ9NQL2 400 aaPredicted RBP17.38■□□□□ 0.37
PCDHA11-202ENST00000616325 GPATCH8Q9UKJ3 1502 aaKnown RBP17.38■□□□□ 0.37
PCDHA11-202ENST00000616325 KNSTRNQ9Y448 316 aa17.37■□□□□ 0.37
PCDHA11-202ENST00000616325 FAM161AQ3B820 660 aa17.37■□□□□ 0.37
PCDHA11-202ENST00000616325 C9orf84Q5VXU9 1444 aa17.37■□□□□ 0.37
PCDHA11-202ENST00000616325 ZMYND15Q9H091 742 aa17.37■□□□□ 0.37
PCDHA11-202ENST00000616325 DNMT1P26358 1616 aaKnown RBP17.36■□□□□ 0.37
PCDHA11-202ENST00000616325 CANXP27824 592 aaKnown RBP17.35■□□□□ 0.37
PCDHA11-202ENST00000616325 CCDC144AA2RUR9 1427 aa17.35■□□□□ 0.37
PCDHA11-202ENST00000616325 DISP1Q96F81 1524 aa17.35■□□□□ 0.37
PCDHA11-202ENST00000616325 TMF1P82094 1093 aa17.34■□□□□ 0.37
PCDHA11-202ENST00000616325 HSP90AA2PQ14568 343 aaPredicted RBP17.34■□□□□ 0.37
PCDHA11-202ENST00000616325 PNNQ9H307 717 aaKnown RBP17.34■□□□□ 0.37
PCDHA11-202ENST00000616325 DISP3Q9P2K9 1392 aa17.33■□□□□ 0.37
PCDHA11-202ENST00000616325 KIF14Q15058 1648 aa17.32■□□□□ 0.36
PCDHA11-202ENST00000616325 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
PCDHA11-202ENST00000616325 KIAA0586Q9BVV6 1533 aa17.31■□□□□ 0.36
PCDHA11-202ENST00000616325 LRPPRCP42704 1394 aaKnown RBP17.3■□□□□ 0.36
PCDHA11-202ENST00000616325 HSP90AA1P07900 732 aaKnown RBP17.3■□□□□ 0.36
PCDHA11-202ENST00000616325 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
PCDHA11-202ENST00000616325 PDE3BQ13370 1112 aa17.29■□□□□ 0.36
PCDHA11-202ENST00000616325 PER1O15534 1290 aaPredicted RBP17.29■□□□□ 0.36
PCDHA11-202ENST00000616325 C8orf34Q49A92 452 aa17.28■□□□□ 0.36
PCDHA11-202ENST00000616325 KDM5CP41229 1560 aa17.28■□□□□ 0.36
PCDHA11-202ENST00000616325 RAPGEF6Q8TEU7 1601 aa17.28■□□□□ 0.36
PCDHA11-202ENST00000616325 PBRM1Q86U86 1689 aa17.28■□□□□ 0.36
PCDHA11-202ENST00000616325 CHGAP10645 457 aaKnown RBP17.28■□□□□ 0.36
PCDHA11-202ENST00000616325 KIAA0556O60303 1618 aa17.27■□□□□ 0.36
PCDHA11-202ENST00000616325 APAF1O14727 1248 aa17.27■□□□□ 0.36
PCDHA11-202ENST00000616325 RALGAPBQ86X10 1494 aa17.27■□□□□ 0.35
PCDHA11-202ENST00000616325 BCAR3O75815 825 aa17.27■□□□□ 0.35
PCDHA11-202ENST00000616325 CENPQQ7L2Z9 268 aaPredicted RBP17.27■□□□□ 0.35
PCDHA11-202ENST00000616325 ERCC6Q03468 1493 aa17.26■□□□□ 0.35
PCDHA11-202ENST00000616325 CARMIL2Q6F5E8 1435 aa17.26■□□□□ 0.35
PCDHA11-202ENST00000616325 RRP7AQ9Y3A4 280 aaKnown RBP17.26■□□□□ 0.35
PCDHA11-202ENST00000616325 MBD5Q9P267 1494 aa17.25■□□□□ 0.35
PCDHA11-202ENST00000616325 BCL2L13Q9BXK5 485 aa17.25■□□□□ 0.35
PCDHA11-202ENST00000616325 GRIN2AQ12879 1464 aa17.25■□□□□ 0.35
PCDHA11-202ENST00000616325 GOLGA2Q08379 1002 aa17.25■□□□□ 0.35
PCDHA11-202ENST00000616325 PANK2Q9BZ23 570 aa17.24■□□□□ 0.35
PCDHA11-202ENST00000616325 L1TD1Q5T7N2 865 aaKnown RBP17.24■□□□□ 0.35
PCDHA11-202ENST00000616325 BECN1Q14457 450 aa17.23■□□□□ 0.35
PCDHA11-202ENST00000616325 TESK2Q96S53 571 aa17.23■□□□□ 0.35
PCDHA11-202ENST00000616325 MRC2Q9UBG0 1479 aa17.23■□□□□ 0.35
PCDHA11-202ENST00000616325 PPP2R1AP30153 589 aa17.22■□□□□ 0.35
PCDHA11-202ENST00000616325 PARD3Q8TEW0 1356 aa17.22■□□□□ 0.35
PCDHA11-202ENST00000616325 GOLGA6L3A6NEY3 463 aa17.21■□□□□ 0.35
PCDHA11-202ENST00000616325 SEC24BO95487 1268 aa17.21■□□□□ 0.35
PCDHA11-202ENST00000616325 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.21■□□□□ 0.35
PCDHA11-202ENST00000616325 CLUAP1Q96AJ1 413 aa17.21■□□□□ 0.35
PCDHA11-202ENST00000616325 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
PCDHA11-202ENST00000616325 COG6Q9Y2V7 657 aa17.2■□□□□ 0.34
PCDHA11-202ENST00000616325 PLEKHH1Q9ULM0 1364 aa17.19■□□□□ 0.34
PCDHA11-202ENST00000616325 DUSP27Q5VZP5 1158 aa17.18■□□□□ 0.34
PCDHA11-202ENST00000616325 PANK1Q8TE04 598 aa17.18■□□□□ 0.34
PCDHA11-202ENST00000616325 ERBINQ96RT1 1412 aa17.17■□□□□ 0.34
PCDHA11-202ENST00000616325 XRCC6P12956 609 aaKnown RBP eCLIP17.17■□□□□ 0.34
PCDHA11-202ENST00000616325 MAGI1Q96QZ7 1491 aaPredicted RBP17.17■□□□□ 0.34
PCDHA11-202ENST00000616325 PRAG1Q86YV5 1406 aa17.16■□□□□ 0.34
PCDHA11-202ENST00000616325 UHRF1BP1Q6BDS2 1440 aa17.16■□□□□ 0.34
PCDHA11-202ENST00000616325 ARID3AQ99856 593 aa17.15■□□□□ 0.34
PCDHA11-202ENST00000616325 DMRT2Q9Y5R5 561 aa17.15■□□□□ 0.34
PCDHA11-202ENST00000616325 ATP10BO94823 1461 aa17.15■□□□□ 0.34
PCDHA11-202ENST00000616325 IFT140Q96RY7 1462 aa17.15■□□□□ 0.34
PCDHA11-202ENST00000616325 UPF2Q9HAU5 1272 aaKnown RBP17.15■□□□□ 0.34
PCDHA11-202ENST00000616325 PTPRGP23470 1445 aa17.14■□□□□ 0.33
PCDHA11-202ENST00000616325 KDM2BQ8NHM5 1336 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms