RNA–Protein interactions for RNA: ENST00000616003.4

MID1-212, Transcript of midline 1, humanhuman

TSL 1 (best) BASIC

Gene MID1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MID1-212ENST00000616003 ROCK2O75116 1388 aaKnown RBP10.52□□□□□ -0.73
MID1-212ENST00000616003 PDS5BQ9NTI5 1447 aa10.52□□□□□ -0.73
MID1-212ENST00000616003 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
MID1-212ENST00000616003 USP47Q96K76 1375 aa10.51□□□□□ -0.73
MID1-212ENST00000616003 RAPGEF6Q8TEU7 1601 aa10.51□□□□□ -0.73
MID1-212ENST00000616003 ADCY10Q96PN6 1610 aa10.51□□□□□ -0.73
MID1-212ENST00000616003 ANP32AP39687 249 aaKnown RBP10.51□□□□□ -0.73
MID1-212ENST00000616003 KIAA1107Q9UPP5 1409 aa10.5□□□□□ -0.73
MID1-212ENST00000616003 CAMSAP2Q08AD1 1489 aa10.5□□□□□ -0.73
MID1-212ENST00000616003 UHRF1BP1Q6BDS2 1440 aa10.5□□□□□ -0.73
MID1-212ENST00000616003 NUP153P49790 1475 aaKnown RBP10.49□□□□□ -0.73
MID1-212ENST00000616003 HMGB1P09429 215 aaKnown RBP10.49□□□□□ -0.73
MID1-212ENST00000616003 KTN1Q86UP2 1357 aaKnown RBP10.48□□□□□ -0.73
MID1-212ENST00000616003 IPO9Q96P70 1041 aaKnown RBP10.48□□□□□ -0.73
MID1-212ENST00000616003 PAK3O75914 559 aaPredicted RBP10.47□□□□□ -0.73
MID1-212ENST00000616003 LRPPRCP42704 1394 aaKnown RBP10.47□□□□□ -0.73
MID1-212ENST00000616003 SLC4A1APQ9BWU0 796 aaKnown RBP10.47□□□□□ -0.73
MID1-212ENST00000616003 KDM5DQ9BY66 1539 aa10.47□□□□□ -0.73
MID1-212ENST00000616003 DISP1Q96F81 1524 aa10.46□□□□□ -0.73
MID1-212ENST00000616003 KIF15Q9NS87 1388 aa10.46□□□□□ -0.74
MID1-212ENST00000616003 POLR3GLQ9BT43 218 aa10.46□□□□□ -0.74
MID1-212ENST00000616003 SHANK2Q9UPX8 1470 aa10.45□□□□□ -0.74
MID1-212ENST00000616003 BRD4O60885 1362 aaPredicted RBP10.45□□□□□ -0.74
MID1-212ENST00000616003 TROQ12816 1431 aaPredicted RBP10.45□□□□□ -0.74
MID1-212ENST00000616003 CEP170Q5SW79 1584 aa10.44□□□□□ -0.74
MID1-212ENST00000616003 NBR1Q14596 966 aa10.44□□□□□ -0.74
MID1-212ENST00000616003 RTL5Q5HYW3 569 aaPredicted RBP10.44□□□□□ -0.74
MID1-212ENST00000616003 KIAA0586Q9BVV6 1533 aa10.44□□□□□ -0.74
MID1-212ENST00000616003 ZMYM4Q5VZL5 1548 aa10.43□□□□□ -0.74
MID1-212ENST00000616003 PIAS4Q8N2W9 510 aaPredicted RBP10.43□□□□□ -0.74
MID1-212ENST00000616003 PNISRQ8TF01 805 aaKnown RBP10.43□□□□□ -0.74
MID1-212ENST00000616003 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.42□□□□□ -0.74
MID1-212ENST00000616003 CDC42BPAQ5VT25 1732 aa10.42□□□□□ -0.74
MID1-212ENST00000616003 IGSF3O75054 1194 aa10.41□□□□□ -0.74
MID1-212ENST00000616003 VSIG10Q8N0Z9 540 aa10.41□□□□□ -0.74
MID1-212ENST00000616003 ZBTB47Q9UFB7 747 aaPredicted RBP10.41□□□□□ -0.74
MID1-212ENST00000616003 MYBBP1AQ9BQG0 1328 aaKnown RBP10.41□□□□□ -0.74
MID1-212ENST00000616003 GPATCH8Q9UKJ3 1502 aaKnown RBP10.41□□□□□ -0.74
MID1-212ENST00000616003 RRP1P56182 461 aaKnown RBP10.4□□□□□ -0.74
MID1-212ENST00000616003 INSRP06213 1382 aa10.4□□□□□ -0.74
MID1-212ENST00000616003 ANKRD30AQ9BXX3 1397 aa10.4□□□□□ -0.74
MID1-212ENST00000616003 LAMC1P11047 1609 aa10.39□□□□□ -0.75
MID1-212ENST00000616003 MRC2Q9UBG0 1479 aa10.39□□□□□ -0.75
MID1-212ENST00000616003 ZNF644Q9H582 1327 aaPredicted RBP10.39□□□□□ -0.75
MID1-212ENST00000616003 ANKRD50Q9ULJ7 1429 aa10.39□□□□□ -0.75
MID1-212ENST00000616003 TCERG1O14776 1098 aaKnown RBP10.39□□□□□ -0.75
MID1-212ENST00000616003 TMC1Q8TDI8 760 aa10.39□□□□□ -0.75
MID1-212ENST00000616003 CCDC9Q9Y3X0 531 aaKnown RBP10.39□□□□□ -0.75
MID1-212ENST00000616003 PLEKHH2Q8IVE3 1493 aa10.38□□□□□ -0.75
MID1-212ENST00000616003 RALBP1Q15311 655 aa10.38□□□□□ -0.75
MID1-212ENST00000616003 NAP1L2Q9ULW6 460 aaPredicted RBP10.38□□□□□ -0.75
MID1-212ENST00000616003 TRPM1Q7Z4N2 1603 aa10.38□□□□□ -0.75
MID1-212ENST00000616003 PTPRGP23470 1445 aa10.38□□□□□ -0.75
MID1-212ENST00000616003 MS4A1P11836 297 aa10.37□□□□□ -0.75
MID1-212ENST00000616003 GRIN2AQ12879 1464 aa10.37□□□□□ -0.75
MID1-212ENST00000616003 PARD3Q8TEW0 1356 aa10.37□□□□□ -0.75
MID1-212ENST00000616003 USP35Q9P2H5 1018 aa10.37□□□□□ -0.75
MID1-212ENST00000616003 PRG4Q92954 1404 aaPredicted RBP10.36□□□□□ -0.75
MID1-212ENST00000616003 IFT140Q96RY7 1462 aa10.36□□□□□ -0.75
MID1-212ENST00000616003 EIF4G3O43432 1585 aaKnown RBP10.36□□□□□ -0.75
MID1-212ENST00000616003 PDE3BQ13370 1112 aa10.36□□□□□ -0.75
MID1-212ENST00000616003 ARHGEF5Q12774 1597 aa10.35□□□□□ -0.75
MID1-212ENST00000616003 BLMP54132 1417 aaPredicted RBP10.35□□□□□ -0.75
MID1-212ENST00000616003 C9orf84Q5VXU9 1444 aa10.35□□□□□ -0.75
MID1-212ENST00000616003 PKD2Q13563 968 aa10.35□□□□□ -0.75
MID1-212ENST00000616003 PPP6R1Q9UPN7 881 aa10.35□□□□□ -0.75
MID1-212ENST00000616003 ARID3CA6NKF2 412 aa10.35□□□□□ -0.75
MID1-212ENST00000616003 COL17A1Q9UMD9 1497 aaPredicted RBP10.34□□□□□ -0.75
MID1-212ENST00000616003 CARD11Q9BXL7 1154 aa10.34□□□□□ -0.75
MID1-212ENST00000616003 CFDP1Q9UEE9 299 aaPredicted RBP10.34□□□□□ -0.75
MID1-212ENST00000616003 RCAN3Q9UKA8 241 aa10.34□□□□□ -0.75
MID1-212ENST00000616003 ZNF608Q9ULD9 1512 aaPredicted RBP10.33□□□□□ -0.76
MID1-212ENST00000616003 NLRP13Q86W25 1043 aa10.33□□□□□ -0.76
MID1-212ENST00000616003 EIF2AK4Q9P2K8 1649 aaKnown RBP10.33□□□□□ -0.76
MID1-212ENST00000616003 ABCC10Q5T3U5 1492 aa10.32□□□□□ -0.76
MID1-212ENST00000616003 PRDM15P57071 1507 aaPredicted RBP10.32□□□□□ -0.76
MID1-212ENST00000616003 EXOC6Q8TAG9 804 aa10.32□□□□□ -0.76
MID1-212ENST00000616003 PRAG1Q86YV5 1406 aa10.32□□□□□ -0.76
MID1-212ENST00000616003 BACH2Q9BYV9 841 aa10.31□□□□□ -0.76
MID1-212ENST00000616003 PLB1Q6P1J6 1458 aa10.31□□□□□ -0.76
MID1-212ENST00000616003 ABCA8O94911 1581 aa10.31□□□□□ -0.76
MID1-212ENST00000616003 PDE4AP27815 886 aa10.31□□□□□ -0.76
MID1-212ENST00000616003 IPO4Q8TEX9 1081 aaKnown RBP10.31□□□□□ -0.76
MID1-212ENST00000616003 NUP155O75694 1391 aa10.31□□□□□ -0.76
MID1-212ENST00000616003 GPRASP1Q5JY77 1395 aa10.31□□□□□ -0.76
MID1-212ENST00000616003 FAM135AQ9P2D6 1515 aa10.31□□□□□ -0.76
MID1-212ENST00000616003 UNC13BO14795 1591 aa10.31□□□□□ -0.76
MID1-212ENST00000616003 RNF17Q9BXT8 1623 aaKnown RBP10.31□□□□□ -0.76
MID1-212ENST00000616003 MAGI1Q96QZ7 1491 aaPredicted RBP10.3□□□□□ -0.76
MID1-212ENST00000616003 PPM1GO15355 546 aaPredicted RBP10.3□□□□□ -0.76
MID1-212ENST00000616003 CNGB1Q14028 1251 aaPredicted RBP10.29□□□□□ -0.76
MID1-212ENST00000616003 DDRGK1Q96HY6 314 aa10.29□□□□□ -0.76
MID1-212ENST00000616003 CFAP44Q96MT7 982 aa10.29□□□□□ -0.76
MID1-212ENST00000616003 WASHC2CQ9Y4E1 1318 aa10.29□□□□□ -0.76
MID1-212ENST00000616003 ST20-MTHFSA0A0A6YYL1 179 aa10.29□□□□□ -0.76
MID1-212ENST00000616003 NCLP19338 710 aaKnown RBP10.29□□□□□ -0.76
MID1-212ENST00000616003 TICAM2Q86XR7 235 aa10.29□□□□□ -0.76
MID1-212ENST00000616003 TEX2Q8IWB9 1127 aa10.29□□□□□ -0.76
MID1-212ENST00000616003 PUS7Q96PZ0 661 aaKnown RBP10.29□□□□□ -0.76
MID1-212ENST00000616003 MYO5CQ9NQX4 1742 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms