RNA–Protein interactions for RNA: ENST00000615771.5

RBM39-244, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-244ENST00000615771 SPDYE16A6NNV3 312 aaPredicted RBP12.48□□□□□ -0.41
RBM39-244ENST00000615771 PPP1R3GB7ZBB8 358 aa12.48□□□□□ -0.41
RBM39-244ENST00000615771 BHMG1C9JSJ3 638 aaPredicted RBP12.47□□□□□ -0.41
RBM39-244ENST00000615771 STAC3Q96MF2 364 aa12.47□□□□□ -0.41
RBM39-244ENST00000615771 HCSTQ9UBK5 93 aa12.45□□□□□ -0.42
RBM39-244ENST00000615771 COL9A1P20849 921 aa12.42□□□□□ -0.42
RBM39-244ENST00000615771 DDX12PQ92771 950 aa12.42□□□□□ -0.42
RBM39-244ENST00000615771 C6orf132Q5T0Z8 1188 aa12.4□□□□□ -0.42
RBM39-244ENST00000615771 TSHZ2Q9NRE2 1034 aa12.4□□□□□ -0.42
RBM39-244ENST00000615771 KCTD12Q96CX2 325 aaKnown RBP12.39□□□□□ -0.43
RBM39-244ENST00000615771 NBPF3Q9H094 633 aa12.39□□□□□ -0.43
RBM39-244ENST00000615771 EN1Q05925 392 aaPredicted RBP12.38□□□□□ -0.43
RBM39-244ENST00000615771 RABGEF1Q9UJ41 708 aa12.38□□□□□ -0.43
RBM39-244ENST00000615771 NBR1Q14596 966 aa12.37□□□□□ -0.43
RBM39-244ENST00000615771 MRPL50Q8N5N7 158 aaKnown RBP12.37□□□□□ -0.43
RBM39-244ENST00000615771 ONECUT3O60422 494 aaPredicted RBP12.36□□□□□ -0.43
RBM39-244ENST00000615771 PROX2Q3B8N5 592 aa12.36□□□□□ -0.43
RBM39-244ENST00000615771 RBM33Q96EV2 1170 aaKnown RBP12.34□□□□□ -0.43
RBM39-244ENST00000615771 GOLGA8CPA6NN73 597 aa12.31□□□□□ -0.44
RBM39-244ENST00000615771 MAP3K7O43318 606 aa12.31□□□□□ -0.44
RBM39-244ENST00000615771 THSD4Q6ZMP0 1018 aa12.31□□□□□ -0.44
RBM39-244ENST00000615771 LAPTM4BQ86VI4 370 aa12.3□□□□□ -0.44
RBM39-244ENST00000615771 WNT2BQ93097 391 aa12.3□□□□□ -0.44
RBM39-244ENST00000615771 TRIM6-TRIM34B2RNG4 842 aa12.29□□□□□ -0.44
RBM39-244ENST00000615771 TSR1Q2NL82 804 aaKnown RBP12.28□□□□□ -0.44
RBM39-244ENST00000615771 ARHGEF1Q92888 912 aaKnown RBP12.28□□□□□ -0.44
RBM39-244ENST00000615771 KIAA1468Q9P260 1216 aa12.28□□□□□ -0.44
RBM39-244ENST00000615771 CCDC180Q9P1Z9 1646 aa12.27□□□□□ -0.44
RBM39-244ENST00000615771 GRXCR2A6NFK2 248 aa12.27□□□□□ -0.45
RBM39-244ENST00000615771 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
RBM39-244ENST00000615771 PLA2G2EQ9NZK7 142 aa12.26□□□□□ -0.45
RBM39-244ENST00000615771 OSBPP22059 807 aa12.25□□□□□ -0.45
RBM39-244ENST00000615771 PLCB2Q00722 1185 aa12.25□□□□□ -0.45
RBM39-244ENST00000615771 CERKQ8TCT0 537 aa12.25□□□□□ -0.45
RBM39-244ENST00000615771 KCNV2Q8TDN2 545 aa12.25□□□□□ -0.45
RBM39-244ENST00000615771 PTPN5P54829 565 aa12.23□□□□□ -0.45
RBM39-244ENST00000615771 ANKK1Q8NFD2 765 aa12.23□□□□□ -0.45
RBM39-244ENST00000615771 TSKSQ9UJT2 592 aa12.21□□□□□ -0.45
RBM39-244ENST00000615771 FAM98CQ17RN3 349 aaKnown RBP12.2□□□□□ -0.46
RBM39-244ENST00000615771 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
RBM39-244ENST00000615771 ZFRQ96KR1 1074 aaKnown RBP12.2□□□□□ -0.46
RBM39-244ENST00000615771 PRSS12P56730 875 aa12.19□□□□□ -0.46
RBM39-244ENST00000615771 PACS2Q86VP3 889 aa12.19□□□□□ -0.46
RBM39-244ENST00000615771 CDCA7LQ96GN5 454 aa12.19□□□□□ -0.46
RBM39-244ENST00000615771 SEPT9Q9UHD8 586 aaPredicted RBP12.19□□□□□ -0.46
RBM39-244ENST00000615771 SOWAHBA6NEL2 793 aa12.18□□□□□ -0.46
RBM39-244ENST00000615771 RBM27Q9P2N5 1060 aaKnown RBP12.18□□□□□ -0.46
RBM39-244ENST00000615771 CDHR5Q9HBB8 845 aa12.16□□□□□ -0.46
RBM39-244ENST00000615771 IFFO2Q5TF58 517 aa12.15□□□□□ -0.46
RBM39-244ENST00000615771 BCAMP50895 628 aa12.14□□□□□ -0.47
RBM39-244ENST00000615771 FAM198AQ9UFP1 575 aa12.14□□□□□ -0.47
RBM39-244ENST00000615771 NYAP1Q6ZVC0 841 aa12.13□□□□□ -0.47
RBM39-244ENST00000615771 MLLT3P42568 568 aaPredicted RBP12.12□□□□□ -0.47
RBM39-244ENST00000615771 NBPF26B4DH59 902 aa12.11□□□□□ -0.47
RBM39-244ENST00000615771 NPDC1Q9NQX5 325 aaPredicted RBP12.11□□□□□ -0.47
RBM39-244ENST00000615771 TTC13Q8NBP0 860 aa12.1□□□□□ -0.47
RBM39-244ENST00000615771 LRCH3Q96II8 777 aa12.09□□□□□ -0.47
RBM39-244ENST00000615771 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.09□□□□□ -0.47
RBM39-244ENST00000615771 TATDN2Q93075 761 aa12.08□□□□□ -0.48
RBM39-244ENST00000615771 TSR3Q9UJK0 312 aaKnown RBP12.07□□□□□ -0.48
RBM39-244ENST00000615771 C3orf80F5H4A9 247 aa12.06□□□□□ -0.48
RBM39-244ENST00000615771 WBP1LQ9NX94 342 aa12.06□□□□□ -0.48
RBM39-244ENST00000615771 PNMA3Q9UL41 463 aa12.06□□□□□ -0.48
RBM39-244ENST00000615771 ITGBL1O95965 494 aaPredicted RBP12.05□□□□□ -0.48
RBM39-244ENST00000615771 SMAPO00193 183 aa12.04□□□□□ -0.48
RBM39-244ENST00000615771 PADI6Q6TGC4 694 aa12.04□□□□□ -0.48
RBM39-244ENST00000615771 HPS5Q9UPZ3 1129 aa12.04□□□□□ -0.48
RBM39-244ENST00000615771 NUDT18Q6ZVK8 323 aa12.02□□□□□ -0.49
RBM39-244ENST00000615771 SEMA3EO15041 775 aa12.01□□□□□ -0.49
RBM39-244ENST00000615771 PTGDRQ13258 359 aa12.01□□□□□ -0.49
RBM39-244ENST00000615771 SAMD7Q7Z3H4 446 aa12.01□□□□□ -0.49
RBM39-244ENST00000615771 A0A0G2JS52 829 aa11.99□□□□□ -0.49
RBM39-244ENST00000615771 HAP1P54257 671 aaPredicted RBP11.99□□□□□ -0.49
RBM39-244ENST00000615771 RGS20O76081 388 aa11.97□□□□□ -0.49
RBM39-244ENST00000615771 PPP4CP60510 307 aa11.97□□□□□ -0.49
RBM39-244ENST00000615771 TESPA1A2RU30 521 aaPredicted RBP11.96□□□□□ -0.49
RBM39-244ENST00000615771 EYA1Q99502 592 aa11.96□□□□□ -0.49
RBM39-244ENST00000615771 HDGFP51858 240 aaKnown RBP11.95□□□□□ -0.5
RBM39-244ENST00000615771 NUTM2FA1L443 756 aa11.93□□□□□ -0.5
RBM39-244ENST00000615771 RB1CC1Q8TDY2 1594 aa11.92□□□□□ -0.5
RBM39-244ENST00000615771 FCHSD2O94868 740 aa11.92□□□□□ -0.5
RBM39-244ENST00000615771 KCNC4Q03721 635 aa11.92□□□□□ -0.5
RBM39-244ENST00000615771 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
RBM39-244ENST00000615771 SMYD5Q6GMV2 418 aa11.91□□□□□ -0.5
RBM39-244ENST00000615771 NECTIN2Q92692 538 aa11.91□□□□□ -0.5
RBM39-244ENST00000615771 SWT1Q5T5J6 900 aaKnown RBP11.89□□□□□ -0.51
RBM39-244ENST00000615771 SLF2Q8IX21 1173 aa11.89□□□□□ -0.51
RBM39-244ENST00000615771 ADGRG1Q9Y653 693 aa11.89□□□□□ -0.51
RBM39-244ENST00000615771 RBM46Q8TBY0 533 aaKnown RBP11.87□□□□□ -0.51
RBM39-244ENST00000615771 RNF40O75150 1001 aa11.86□□□□□ -0.51
RBM39-244ENST00000615771 DNAJB2P25686 324 aa11.86□□□□□ -0.51
RBM39-244ENST00000615771 TJAP1Q5JTD0 557 aa11.86□□□□□ -0.51
RBM39-244ENST00000615771 VSIG10Q8N0Z9 540 aa11.86□□□□□ -0.51
RBM39-244ENST00000615771 SLC4A3P48751 1232 aa11.85□□□□□ -0.51
RBM39-244ENST00000615771 HIC1Q14526 733 aa11.85□□□□□ -0.51
RBM39-244ENST00000615771 APLP1P51693 650 aa11.84□□□□□ -0.51
RBM39-244ENST00000615771 RBM26Q5T8P6 1007 aaKnown RBP11.83□□□□□ -0.52
RBM39-244ENST00000615771 TMEM134Q9H6X4 195 aa11.83□□□□□ -0.52
RBM39-244ENST00000615771 MTRQ99707 1265 aa11.82□□□□□ -0.52
RBM39-244ENST00000615771 IL21Q9HBE4 155 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms