RNA–Protein interactions for RNA: ENST00000615676.1

YTHDF3-208, Transcript of YTH N6-methyladenosine RNA binding protein 3, humanhuman

TSL 1 (best)

Gene YTHDF3, Length 5,092 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3-208ENST00000615676 HNRNPMP52272 730 aaKnown RBP eCLIP16.96■□□□□ 0.312e-8■■■□□ 16.1
YTHDF3-208ENST00000615676 GTF2E1P29083 439 aaPredicted RBP16.96■□□□□ 0.3
YTHDF3-208ENST00000615676 L3MBTL2Q969R5 705 aa16.96■□□□□ 0.3
YTHDF3-208ENST00000615676 CCDC88BA6NC98 1476 aa16.95■□□□□ 0.3
YTHDF3-208ENST00000615676 KIF16BQ96L93 1317 aa16.94■□□□□ 0.3
YTHDF3-208ENST00000615676 PHF14O94880 888 aa16.94■□□□□ 0.3
YTHDF3-208ENST00000615676 GOLGA6L3A6NEY3 463 aa16.94■□□□□ 0.3
YTHDF3-208ENST00000615676 FRAT2O75474 233 aaPredicted RBP16.94■□□□□ 0.3
YTHDF3-208ENST00000615676 GZF1Q9H116 711 aaPredicted RBP16.94■□□□□ 0.3
YTHDF3-208ENST00000615676 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
YTHDF3-208ENST00000615676 UACAQ9BZF9 1416 aa16.94■□□□□ 0.3
YTHDF3-208ENST00000615676 CLUAP1Q96AJ1 413 aa16.93■□□□□ 0.3
YTHDF3-208ENST00000615676 KIF15Q9NS87 1388 aa16.92■□□□□ 0.3
YTHDF3-208ENST00000615676 TOMM22Q9NS69 142 aa16.92■□□□□ 0.3
YTHDF3-208ENST00000615676 CCDC146Q8IYE0 955 aa16.91■□□□□ 0.3
YTHDF3-208ENST00000615676 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.9■□□□□ 0.36e-7■■■■□ 23.3
YTHDF3-208ENST00000615676 MARCH6O60337 910 aa16.9■□□□□ 0.3
YTHDF3-208ENST00000615676 LTV1Q96GA3 475 aaPredicted RBP16.9■□□□□ 0.3
YTHDF3-208ENST00000615676 CEP89Q96ST8 783 aa16.9■□□□□ 0.3
YTHDF3-208ENST00000615676 SF3A1Q15459 793 aaKnown RBP16.89■□□□□ 0.29
YTHDF3-208ENST00000615676 GOLGA6L1Q8N7Z2 621 aa16.89■□□□□ 0.29
YTHDF3-208ENST00000615676 RAPGEF2Q9Y4G8 1499 aa16.89■□□□□ 0.29
YTHDF3-208ENST00000615676 MYBBP1AQ9BQG0 1328 aaKnown RBP16.89■□□□□ 0.29
YTHDF3-208ENST00000615676 TPM3P06753 285 aa16.89■□□□□ 0.29
YTHDF3-208ENST00000615676 IPO9Q96P70 1041 aaKnown RBP16.89■□□□□ 0.29
YTHDF3-208ENST00000615676 VGFO15240 615 aaPredicted RBP16.88■□□□□ 0.29
YTHDF3-208ENST00000615676 LRRFIP1Q32MZ4 808 aaKnown RBP16.88■□□□□ 0.29
YTHDF3-208ENST00000615676 TRAK1Q9UPV9 953 aa16.88■□□□□ 0.29
YTHDF3-208ENST00000615676 CCDC144AA2RUR9 1427 aa16.87■□□□□ 0.29
YTHDF3-208ENST00000615676 C1orf141Q5JVX7 400 aa16.87■□□□□ 0.29
YTHDF3-208ENST00000615676 COG3Q96JB2 828 aa16.87■□□□□ 0.29
YTHDF3-208ENST00000615676 NUTM2DQ5VT03 806 aaPredicted RBP16.87■□□□□ 0.29
YTHDF3-208ENST00000615676 ATP6V1DQ9Y5K8 247 aa16.86■□□□□ 0.29
YTHDF3-208ENST00000615676 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
YTHDF3-208ENST00000615676 A0A0U1RQG5 324 aaPredicted RBP16.86■□□□□ 0.29
YTHDF3-208ENST00000615676 EVC2Q86UK5 1308 aa16.85■□□□□ 0.29
YTHDF3-208ENST00000615676 DDX11L8A8MPP1 907 aa16.84■□□□□ 0.29
YTHDF3-208ENST00000615676 JPH4Q96JJ6 628 aa16.84■□□□□ 0.29
YTHDF3-208ENST00000615676 NOL8Q76FK4 1167 aaKnown RBP16.84■□□□□ 0.29
YTHDF3-208ENST00000615676 ABCC8Q09428 1581 aa16.84■□□□□ 0.29
YTHDF3-208ENST00000615676 E9PSI1 815 aa16.83■□□□□ 0.29
YTHDF3-208ENST00000615676 H3BQV1 296 aa16.83■□□□□ 0.28
YTHDF3-208ENST00000615676 AKAP17AQ02040 695 aaKnown RBP16.83■□□□□ 0.28
YTHDF3-208ENST00000615676 IFFO2Q5TF58 517 aa16.83■□□□□ 0.28
YTHDF3-208ENST00000615676 CENPQQ7L2Z9 268 aaPredicted RBP16.83■□□□□ 0.28
YTHDF3-208ENST00000615676 FHOD3Q2V2M9 1422 aa16.83■□□□□ 0.28
YTHDF3-208ENST00000615676 NEXNQ0ZGT2 675 aa16.83■□□□□ 0.28
YTHDF3-208ENST00000615676 TEFQ10587 303 aa16.83■□□□□ 0.28
YTHDF3-208ENST00000615676 ZKSCAN2Q63HK3 967 aa16.83■□□□□ 0.28
YTHDF3-208ENST00000615676 VPS53Q5VIR6 699 aa16.82■□□□□ 0.28
YTHDF3-208ENST00000615676 CREBRFQ8IUR6 639 aa16.82■□□□□ 0.28
YTHDF3-208ENST00000615676 FAM184AQ8NB25 1140 aa16.81■□□□□ 0.28
YTHDF3-208ENST00000615676 PANK3Q9H999 370 aa16.81■□□□□ 0.28
YTHDF3-208ENST00000615676 SYNE3Q6ZMZ3 975 aa16.81■□□□□ 0.28
YTHDF3-208ENST00000615676 NGEFQ8N5V2 710 aa16.81■□□□□ 0.28
YTHDF3-208ENST00000615676 PRM3Q9NNZ6 103 aa16.81■□□□□ 0.28
YTHDF3-208ENST00000615676 NUTM2FA1L443 756 aa16.81■□□□□ 0.28
YTHDF3-208ENST00000615676 CPLX2Q6PUV4 134 aaKnown RBP16.81■□□□□ 0.28
YTHDF3-208ENST00000615676 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
YTHDF3-208ENST00000615676 CADPSQ9ULU8 1353 aa16.81■□□□□ 0.28
YTHDF3-208ENST00000615676 TSR1Q2NL82 804 aaKnown RBP16.8■□□□□ 0.28
YTHDF3-208ENST00000615676 AMOTL1Q8IY63 956 aa16.8■□□□□ 0.28
YTHDF3-208ENST00000615676 ST20-MTHFSA0A0A6YYL1 179 aa16.8■□□□□ 0.28
YTHDF3-208ENST00000615676 TTC5Q8N0Z6 440 aa16.8■□□□□ 0.28
YTHDF3-208ENST00000615676 RUFY2Q8WXA3 655 aa16.8■□□□□ 0.28
YTHDF3-208ENST00000615676 EVA1CP58658 441 aa16.79■□□□□ 0.28
YTHDF3-208ENST00000615676 TPD52L1Q16890 204 aaPredicted RBP16.79■□□□□ 0.28
YTHDF3-208ENST00000615676 RILPL2Q969X0 211 aa16.79■□□□□ 0.28
YTHDF3-208ENST00000615676 NOL10Q9BSC4 688 aaKnown RBP16.79■□□□□ 0.28
YTHDF3-208ENST00000615676 TPM2P07951 284 aa16.78■□□□□ 0.28
YTHDF3-208ENST00000615676 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
YTHDF3-208ENST00000615676 SKOR2Q2VWA4 1001 aaPredicted RBP16.78■□□□□ 0.28
YTHDF3-208ENST00000615676 RRP7AQ9Y3A4 280 aaKnown RBP16.78■□□□□ 0.28
YTHDF3-208ENST00000615676 ANKRD45Q5TZF3 282 aa16.77■□□□□ 0.28
YTHDF3-208ENST00000615676 DIAPH3Q9NSV4 1193 aa16.77■□□□□ 0.28
YTHDF3-208ENST00000615676 TPM1P09493 284 aa16.77■□□□□ 0.27
YTHDF3-208ENST00000615676 FAM161AQ3B820 660 aa16.76■□□□□ 0.27
YTHDF3-208ENST00000615676 GOLGA6L19H0YKK7 550 aa16.75■□□□□ 0.27
YTHDF3-208ENST00000615676 REC8O95072 547 aa16.75■□□□□ 0.27
YTHDF3-208ENST00000615676 ZKSCAN1P17029 563 aaPredicted RBP16.75■□□□□ 0.27
YTHDF3-208ENST00000615676 TNNT3P45378 269 aaPredicted RBP16.75■□□□□ 0.27
YTHDF3-208ENST00000615676 ELL2O00472 640 aaPredicted RBP16.74■□□□□ 0.27
YTHDF3-208ENST00000615676 PES1O00541 588 aaKnown RBP16.74■□□□□ 0.27
YTHDF3-208ENST00000615676 C9orf78Q9NZ63 289 aaPredicted RBP16.74■□□□□ 0.27
YTHDF3-208ENST00000615676 DDX58O95786 925 aaKnown RBP16.74■□□□□ 0.27
YTHDF3-208ENST00000615676 API5Q9BZZ5 524 aaKnown RBP16.74■□□□□ 0.27
YTHDF3-208ENST00000615676 BECN2A8MW95 431 aa16.74■□□□□ 0.27
YTHDF3-208ENST00000615676 DDX19BQ9UMR2 479 aa16.73■□□□□ 0.27
YTHDF3-208ENST00000615676 TRIM29Q14134 588 aa16.73■□□□□ 0.27
YTHDF3-208ENST00000615676 ROCK1Q13464 1354 aa16.73■□□□□ 0.27
YTHDF3-208ENST00000615676 TRIM34Q9BYJ4 488 aa16.72■□□□□ 0.27
YTHDF3-208ENST00000615676 PDE4CQ08493 712 aa16.72■□□□□ 0.27
YTHDF3-208ENST00000615676 CCDC47Q96A33 483 aaKnown RBP16.72■□□□□ 0.27
YTHDF3-208ENST00000615676 TOP2AP11388 1531 aaKnown RBP16.72■□□□□ 0.27
YTHDF3-208ENST00000615676 PTPRGP23470 1445 aa16.72■□□□□ 0.27
YTHDF3-208ENST00000615676 DIAPH1O60610 1272 aaKnown RBP16.72■□□□□ 0.27
YTHDF3-208ENST00000615676 DDX49Q9Y6V7 483 aaKnown RBP16.72■□□□□ 0.27
YTHDF3-208ENST00000615676 STAC3Q96MF2 364 aa16.71■□□□□ 0.27
YTHDF3-208ENST00000615676 TCEAL9Q9UHQ7 104 aa16.7■□□□□ 0.26
YTHDF3-208ENST00000615676 CCDC70Q6NSX1 233 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms