RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SCAPERQ9BY12 1400 aa12.48□□□□□ -0.41
TNFRSF9-204ENST00000615230 DDRGK1Q96HY6 314 aa12.47□□□□□ -0.41
TNFRSF9-204ENST00000615230 STK31Q9BXU1 1019 aa12.47□□□□□ -0.41
TNFRSF9-204ENST00000615230 LRRC9Q6ZRR7 1453 aa12.47□□□□□ -0.41
TNFRSF9-204ENST00000615230 SUPT6HQ7KZ85 1726 aaKnown RBP12.47□□□□□ -0.41
TNFRSF9-204ENST00000615230 HSPA5P11021 654 aaKnown RBP12.47□□□□□ -0.41
TNFRSF9-204ENST00000615230 GPRASP1Q5JY77 1395 aa12.46□□□□□ -0.41
TNFRSF9-204ENST00000615230 FKBP8Q14318 412 aa12.46□□□□□ -0.41
TNFRSF9-204ENST00000615230 AKNAQ7Z591 1439 aa12.46□□□□□ -0.42
TNFRSF9-204ENST00000615230 G3V3G9 751 aa12.46□□□□□ -0.42
TNFRSF9-204ENST00000615230 DCAF8Q5TAQ9 597 aa12.46□□□□□ -0.42
TNFRSF9-204ENST00000615230 NEUROD2Q15784 382 aa12.45□□□□□ -0.42
TNFRSF9-204ENST00000615230 ANKRD50Q9ULJ7 1429 aa12.45□□□□□ -0.42
TNFRSF9-204ENST00000615230 ANKLE2Q86XL3 938 aa12.44□□□□□ -0.42
TNFRSF9-204ENST00000615230 RUSC2Q8N2Y8 1516 aa12.44□□□□□ -0.42
TNFRSF9-204ENST00000615230 RPGRIP1LQ68CZ1 1315 aa12.44□□□□□ -0.42
TNFRSF9-204ENST00000615230 CCER2I3L3R5 266 aa12.44□□□□□ -0.42
TNFRSF9-204ENST00000615230 HFM1A2PYH4 1435 aa12.44□□□□□ -0.42
TNFRSF9-204ENST00000615230 CD109Q6YHK3 1445 aa12.44□□□□□ -0.42
TNFRSF9-204ENST00000615230 SLC52A1Q9NWF4 448 aa12.43□□□□□ -0.42
TNFRSF9-204ENST00000615230 WDR97A6NE52 1622 aa12.43□□□□□ -0.42
TNFRSF9-204ENST00000615230 HIRIP3Q9BW71 556 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF9-204ENST00000615230 ANO8Q9HCE9 1232 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF9-204ENST00000615230 GTF3C3Q9Y5Q9 886 aa12.42□□□□□ -0.42
TNFRSF9-204ENST00000615230 MCCP23508 829 aa12.42□□□□□ -0.42
TNFRSF9-204ENST00000615230 GPATCH3Q96I76 525 aa12.42□□□□□ -0.42
TNFRSF9-204ENST00000615230 ANP32EQ9BTT0 268 aa12.42□□□□□ -0.42
TNFRSF9-204ENST00000615230 U2AF1L5P0DN76 240 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF9-204ENST00000615230 U2AF1Q01081 240 aaKnown RBP eCLIP12.42□□□□□ -0.42
TNFRSF9-204ENST00000615230 GOLGA6L22H0YM25 854 aa12.41□□□□□ -0.42
TNFRSF9-204ENST00000615230 PRXQ9BXM0 1461 aa12.41□□□□□ -0.42
TNFRSF9-204ENST00000615230 TRAK1Q9UPV9 953 aa12.41□□□□□ -0.42
TNFRSF9-204ENST00000615230 ZRSR1Q15695 479 aaKnown RBP12.41□□□□□ -0.42
TNFRSF9-204ENST00000615230 BIVM-ERCC5R4GMW8 1640 aa12.4□□□□□ -0.42
TNFRSF9-204ENST00000615230 EPRSP07814 1512 aaKnown RBP12.4□□□□□ -0.42
TNFRSF9-204ENST00000615230 PHF23Q9BUL5 403 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF9-204ENST00000615230 C9orf84Q5VXU9 1444 aa12.4□□□□□ -0.42
TNFRSF9-204ENST00000615230 URB2Q14146 1524 aaKnown RBP12.39□□□□□ -0.43
TNFRSF9-204ENST00000615230 NUTM2DQ5VT03 806 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF9-204ENST00000615230 SF3B2Q13435 895 aaKnown RBP12.39□□□□□ -0.43
TNFRSF9-204ENST00000615230 TAF7LQ5H9L4 462 aa12.39□□□□□ -0.43
TNFRSF9-204ENST00000615230 SMG6Q86US8 1419 aaKnown RBP12.39□□□□□ -0.43
TNFRSF9-204ENST00000615230 PROSER2Q86WR7 435 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF9-204ENST00000615230 TXNDC2Q86VQ3 553 aa12.38□□□□□ -0.43
TNFRSF9-204ENST00000615230 TTC5Q8N0Z6 440 aa12.38□□□□□ -0.43
TNFRSF9-204ENST00000615230 NGEFQ8N5V2 710 aa12.37□□□□□ -0.43
TNFRSF9-204ENST00000615230 KCNJ4P48050 445 aa12.37□□□□□ -0.43
TNFRSF9-204ENST00000615230 GTF2E1P29083 439 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF9-204ENST00000615230 DNAJC5BQ9UF47 199 aa12.37□□□□□ -0.43
TNFRSF9-204ENST00000615230 DAPK1P53355 1430 aa12.36□□□□□ -0.43
TNFRSF9-204ENST00000615230 HMMRO75330 724 aa12.36□□□□□ -0.43
TNFRSF9-204ENST00000615230 DENND4BO75064 1496 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF9-204ENST00000615230 FGD1P98174 961 aa12.36□□□□□ -0.43
TNFRSF9-204ENST00000615230 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF9-204ENST00000615230 FRAT1Q92837 279 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF9-204ENST00000615230 WWC1Q8IX03 1113 aa12.36□□□□□ -0.43
TNFRSF9-204ENST00000615230 CCDC141Q6ZP82 1450 aa12.35□□□□□ -0.43
TNFRSF9-204ENST00000615230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.35□□□□□ -0.43
TNFRSF9-204ENST00000615230 L3MBTL2Q969R5 705 aa12.35□□□□□ -0.43
TNFRSF9-204ENST00000615230 ADGRL1O94910 1474 aa12.35□□□□□ -0.43
TNFRSF9-204ENST00000615230 HSP90B1P14625 803 aaKnown RBP12.35□□□□□ -0.43
TNFRSF9-204ENST00000615230 ZNF330Q9Y3S2 320 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF9-204ENST00000615230 ROCK1Q13464 1354 aa12.33□□□□□ -0.44
TNFRSF9-204ENST00000615230 GORABQ5T7V8 394 aa12.33□□□□□ -0.44
TNFRSF9-204ENST00000615230 MINK1Q8N4C8 1332 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF9-204ENST00000615230 TEFQ10587 303 aa12.31□□□□□ -0.44
TNFRSF9-204ENST00000615230 NLRP13Q86W25 1043 aa12.31□□□□□ -0.44
TNFRSF9-204ENST00000615230 RAPGEF4Q8WZA2 1011 aa12.31□□□□□ -0.44
TNFRSF9-204ENST00000615230 PDE3BQ13370 1112 aa12.3□□□□□ -0.44
TNFRSF9-204ENST00000615230 LRRFIP1Q32MZ4 808 aaKnown RBP12.3□□□□□ -0.44
TNFRSF9-204ENST00000615230 TIAM1Q13009 1591 aa12.3□□□□□ -0.44
TNFRSF9-204ENST00000615230 MSH5O43196 834 aa12.3□□□□□ -0.44
TNFRSF9-204ENST00000615230 ANKRD30BQ9BXX2 1392 aa12.3□□□□□ -0.44
TNFRSF9-204ENST00000615230 WDR62O43379 1518 aa12.3□□□□□ -0.44
TNFRSF9-204ENST00000615230 LRPPRCP42704 1394 aaKnown RBP12.3□□□□□ -0.44
TNFRSF9-204ENST00000615230 THOC2Q8NI27 1593 aaKnown RBP12.3□□□□□ -0.44
TNFRSF9-204ENST00000615230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.3□□□□□ -0.44
TNFRSF9-204ENST00000615230 LTV1Q96GA3 475 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF9-204ENST00000615230 ZNF692Q9BU19 519 aaPredicted RBP12.29□□□□□ -0.44
TNFRSF9-204ENST00000615230 CHMP4CQ96CF2 233 aa12.29□□□□□ -0.44
TNFRSF9-204ENST00000615230 DDX58O95786 925 aaKnown RBP12.29□□□□□ -0.44
TNFRSF9-204ENST00000615230 AFAP1Q8N556 730 aa12.29□□□□□ -0.44
TNFRSF9-204ENST00000615230 MYBBP1AQ9BQG0 1328 aaKnown RBP12.29□□□□□ -0.44
TNFRSF9-204ENST00000615230 KIAA1211Q6ZU35 1233 aa12.29□□□□□ -0.44
TNFRSF9-204ENST00000615230 NEXNQ0ZGT2 675 aa12.28□□□□□ -0.44
TNFRSF9-204ENST00000615230 NOL10Q9BSC4 688 aaKnown RBP12.28□□□□□ -0.44
TNFRSF9-204ENST00000615230 RWDD1Q9H446 243 aaPredicted RBP12.27□□□□□ -0.44
TNFRSF9-204ENST00000615230 USP47Q96K76 1375 aa12.27□□□□□ -0.44
TNFRSF9-204ENST00000615230 AMOTL1Q8IY63 956 aa12.27□□□□□ -0.45
TNFRSF9-204ENST00000615230 PMFBP1Q8TBY8 1022 aa12.27□□□□□ -0.45
TNFRSF9-204ENST00000615230 MIER1Q8N108 512 aa12.27□□□□□ -0.45
TNFRSF9-204ENST00000615230 ARAP1Q96P48 1450 aa12.26□□□□□ -0.45
TNFRSF9-204ENST00000615230 GOLGA6L6A8MZA4 724 aa12.26□□□□□ -0.45
TNFRSF9-204ENST00000615230 DIAPH1O60610 1272 aaKnown RBP12.26□□□□□ -0.45
TNFRSF9-204ENST00000615230 MAP3K1Q13233 1512 aa12.26□□□□□ -0.45
TNFRSF9-204ENST00000615230 NUTM2FA1L443 756 aa12.26□□□□□ -0.45
TNFRSF9-204ENST00000615230 CHMP3Q9Y3E7 222 aa12.25□□□□□ -0.45
TNFRSF9-204ENST00000615230 ESCO1Q5FWF5 840 aa12.25□□□□□ -0.45
TNFRSF9-204ENST00000615230 ISY1Q9ULR0 285 aaKnown RBP12.25□□□□□ -0.45
TNFRSF9-204ENST00000615230 KIAA1107Q9UPP5 1409 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms