RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 SETD5Q9C0A6 1442 aa30.78■■■□□ 2.52
POLR2J3-220ENST00000613744 PLXNC1O60486 1568 aa30.78■■■□□ 2.52
POLR2J3-220ENST00000613744 HFM1A2PYH4 1435 aa30.77■■■□□ 2.52
POLR2J3-220ENST00000613744 RAB3GAP2Q9H2M9 1393 aa30.76■■■□□ 2.52
POLR2J3-220ENST00000613744 DIP2CQ9Y2E4 1556 aa30.76■■■□□ 2.51
POLR2J3-220ENST00000613744 MAGI2Q86UL8 1455 aa30.75■■■□□ 2.51
POLR2J3-220ENST00000613744 ANKRD50Q9ULJ7 1429 aa30.71■■■□□ 2.51
POLR2J3-220ENST00000613744 A2MP01023 1474 aa30.7■■■□□ 2.51
POLR2J3-220ENST00000613744 BCANQ96GW7 911 aa30.69■■■□□ 2.5
POLR2J3-220ENST00000613744 GCC2Q8IWJ2 1684 aa30.69■■■□□ 2.5
POLR2J3-220ENST00000613744 DUOX2Q9NRD8 1548 aa30.69■■■□□ 2.5
POLR2J3-220ENST00000613744 ARHGEF40Q8TER5 1519 aa30.68■■■□□ 2.5
POLR2J3-220ENST00000613744 ATP10AO60312 1499 aa30.68■■■□□ 2.5
POLR2J3-220ENST00000613744 DHX29Q7Z478 1369 aaKnown RBP30.68■■■□□ 2.5
POLR2J3-220ENST00000613744 CCER2I3L3R5 266 aa30.66■■■□□ 2.5
POLR2J3-220ENST00000613744 KIF3BO15066 747 aa30.64■■■□□ 2.5
POLR2J3-220ENST00000613744 FANCIQ9NVI1 1328 aa30.62■■■□□ 2.49
POLR2J3-220ENST00000613744 SIGLEC1Q9BZZ2 1709 aa30.62■■■□□ 2.49
POLR2J3-220ENST00000613744 ERBINQ96RT1 1412 aa30.6■■■□□ 2.49
POLR2J3-220ENST00000613744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.6■■■□□ 2.49
POLR2J3-220ENST00000613744 ARID4BQ4LE39 1312 aaPredicted RBP30.6■■■□□ 2.49
POLR2J3-220ENST00000613744 TRIM52Q96A61 297 aa30.58■■■□□ 2.49
POLR2J3-220ENST00000613744 MLECQ14165 292 aa30.57■■■□□ 2.48
POLR2J3-220ENST00000613744 GGT6Q6P531 493 aa30.57■■■□□ 2.48
POLR2J3-220ENST00000613744 TIMELESSQ9UNS1 1208 aa30.55■■■□□ 2.48
POLR2J3-220ENST00000613744 PPP1R15AO75807 674 aaPredicted RBP30.51■■■□□ 2.47
POLR2J3-220ENST00000613744 REREQ9P2R6 1566 aa30.5■■■□□ 2.47
POLR2J3-220ENST00000613744 EIF2AK4Q9P2K8 1649 aaKnown RBP30.48■■■□□ 2.47
POLR2J3-220ENST00000613744 NUP155O75694 1391 aa30.47■■■□□ 2.47
POLR2J3-220ENST00000613744 MSH5O43196 834 aa30.46■■■□□ 2.47
POLR2J3-220ENST00000613744 AGLP35573 1532 aa30.44■■■□□ 2.46
POLR2J3-220ENST00000613744 DDX10Q13206 875 aaKnown RBP30.42■■■□□ 2.46
POLR2J3-220ENST00000613744 MROH1Q8NDA8 1641 aa30.41■■■□□ 2.46
POLR2J3-220ENST00000613744 UNC13BO14795 1591 aa30.4■■■□□ 2.46
POLR2J3-220ENST00000613744 BCORL1Q5H9F3 1711 aa30.39■■■□□ 2.46
POLR2J3-220ENST00000613744 DEPDC5O75140 1603 aa30.39■■■□□ 2.46
POLR2J3-220ENST00000613744 RNF17Q9BXT8 1623 aaKnown RBP30.39■■■□□ 2.46
POLR2J3-220ENST00000613744 WASHC2CQ9Y4E1 1318 aa30.37■■■□□ 2.45
POLR2J3-220ENST00000613744 ANP32CO43423 234 aa30.37■■■□□ 2.45
POLR2J3-220ENST00000613744 SLC4A1APQ9BWU0 796 aaKnown RBP30.37■■■□□ 2.45
POLR2J3-220ENST00000613744 KANK1Q14678 1352 aa30.35■■■□□ 2.45
POLR2J3-220ENST00000613744 PRDM15P57071 1507 aaPredicted RBP30.35■■■□□ 2.45
POLR2J3-220ENST00000613744 MPHOSPH9Q99550 1183 aa30.35■■■□□ 2.45
POLR2J3-220ENST00000613744 ERICH6BQ5W0A0 696 aa30.34■■■□□ 2.45
POLR2J3-220ENST00000613744 PZPP20742 1482 aa30.34■■■□□ 2.45
POLR2J3-220ENST00000613744 FOXD1Q16676 465 aa30.34■■■□□ 2.45
POLR2J3-220ENST00000613744 ERICH6Q7L0X2 663 aa30.33■■■□□ 2.45
POLR2J3-220ENST00000613744 FAM135AQ9P2D6 1515 aa30.33■■■□□ 2.45
POLR2J3-220ENST00000613744 CEP152O94986 1710 aa30.31■■■□□ 2.44
POLR2J3-220ENST00000613744 IQGAP3Q86VI3 1631 aa30.29■■■□□ 2.44
POLR2J3-220ENST00000613744 ESF1Q9H501 851 aaKnown RBP30.28■■■□□ 2.44
POLR2J3-220ENST00000613744 KDM5DQ9BY66 1539 aa30.28■■■□□ 2.44
POLR2J3-220ENST00000613744 PKD2Q13563 968 aa30.27■■■□□ 2.44
POLR2J3-220ENST00000613744 VWDEQ8N2E2 1590 aa30.27■■■□□ 2.44
POLR2J3-220ENST00000613744 ABCC3O15438 1527 aa30.26■■■□□ 2.43
POLR2J3-220ENST00000613744 PLPPR3Q6T4P5 718 aa30.24■■■□□ 2.43
POLR2J3-220ENST00000613744 CLTCQ00610 1675 aaKnown RBP30.23■■■□□ 2.43
POLR2J3-220ENST00000613744 PPP6R1Q9UPN7 881 aa30.21■■■□□ 2.43
POLR2J3-220ENST00000613744 TET3O43151 1660 aa30.17■■■□□ 2.42
POLR2J3-220ENST00000613744 FER1L4A9Z1Z3 1794 aa30.17■■■□□ 2.42
POLR2J3-220ENST00000613744 CAMSAP1Q5T5Y3 1602 aa30.17■■■□□ 2.42
POLR2J3-220ENST00000613744 MADDQ8WXG6 1647 aa30.17■■■□□ 2.42
POLR2J3-220ENST00000613744 CFAP65Q6ZU64 1925 aaKnown RBP30.17■■■□□ 2.42
POLR2J3-220ENST00000613744 LMTK2Q8IWU2 1503 aa30.16■■■□□ 2.42
POLR2J3-220ENST00000613744 ZC3H13Q5T200 1668 aaKnown RBP30.16■■■□□ 2.42
POLR2J3-220ENST00000613744 CEBPAP49715 358 aaPredicted RBP30.15■■■□□ 2.42
POLR2J3-220ENST00000613744 E9PCH4 1651 aa30.15■■■□□ 2.42
POLR2J3-220ENST00000613744 EFCAB6Q5THR3 1501 aa30.14■■■□□ 2.42
POLR2J3-220ENST00000613744 ZMYM3Q14202 1370 aa30.14■■■□□ 2.41
POLR2J3-220ENST00000613744 NPATQ14207 1427 aa30.13■■■□□ 2.41
POLR2J3-220ENST00000613744 FBXO31Q5XUX0 539 aaPredicted RBP30.13■■■□□ 2.41
POLR2J3-220ENST00000613744 ADAMTSL3P82987 1691 aa30.13■■■□□ 2.41
POLR2J3-220ENST00000613744 SIN3AQ96ST3 1273 aa30.12■■■□□ 2.41
POLR2J3-220ENST00000613744 RIMS1Q86UR5 1692 aaKnown RBP30.1■■■□□ 2.41
POLR2J3-220ENST00000613744 CNTLNQ9NXG0 1405 aa30.08■■■□□ 2.41
POLR2J3-220ENST00000613744 KDM4FA0A1W2PPD8 638 aa30.05■■■□□ 2.4
POLR2J3-220ENST00000613744 ARHGAP31Q2M1Z3 1444 aa30.03■■■□□ 2.4
POLR2J3-220ENST00000613744 PPP4R2Q9NY27 417 aa30.02■■■□□ 2.4
POLR2J3-220ENST00000613744 ANKRD30BQ9BXX2 1392 aa30.02■■■□□ 2.4
POLR2J3-220ENST00000613744 PLA2R1Q13018 1463 aa30.01■■■□□ 2.4
POLR2J3-220ENST00000613744 C3P01024 1663 aa30.01■■■□□ 2.39
POLR2J3-220ENST00000613744 MROH2AA6NES4 1674 aa30■■■□□ 2.39
POLR2J3-220ENST00000613744 RPRD2Q5VT52 1461 aaKnown RBP30■■■□□ 2.39
POLR2J3-220ENST00000613744 DEKP35659 375 aaKnown RBP29.99■■■□□ 2.39
POLR2J3-220ENST00000613744 SPHKAPQ2M3C7 1700 aa29.97■■■□□ 2.39
POLR2J3-220ENST00000613744 PREX1Q8TCU6 1659 aa29.97■■■□□ 2.39
POLR2J3-220ENST00000613744 UGGT1Q9NYU2 1555 aa29.96■■■□□ 2.39
POLR2J3-220ENST00000613744 ERVK-7P63135 1459 aa29.96■■■□□ 2.39
POLR2J3-220ENST00000613744 PTPRTO14522 1441 aa29.95■■■□□ 2.38
POLR2J3-220ENST00000613744 PTPRMP28827 1452 aa29.95■■■□□ 2.38
POLR2J3-220ENST00000613744 PRKCSHP14314 528 aaPredicted RBP29.94■■■□□ 2.38
POLR2J3-220ENST00000613744 NOS1P29475 1434 aa29.94■■■□□ 2.38
POLR2J3-220ENST00000613744 SYNMO15061 1565 aa29.92■■■□□ 2.38
POLR2J3-220ENST00000613744 CCDC144AA2RUR9 1427 aa29.91■■■□□ 2.38
POLR2J3-220ENST00000613744 HNRNPUQ00839 825 aaKnown RBP eCLIP29.91■■■□□ 2.38
POLR2J3-220ENST00000613744 TRPM2O94759 1503 aa29.9■■■□□ 2.38
POLR2J3-220ENST00000613744 SPATA31D1Q6ZQQ2 1576 aa29.89■■■□□ 2.38
POLR2J3-220ENST00000613744 IDI1Q13907 227 aa29.88■■■□□ 2.37
POLR2J3-220ENST00000613744 TONSLQ96HA7 1378 aa29.88■■■□□ 2.37
POLR2J3-220ENST00000613744 TNRQ92752 1358 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms