RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 SAMD9Q5K651 1589 aa11.34□□□□□ -0.59
PDE6A-204ENST00000613228 VGFO15240 615 aaPredicted RBP11.33□□□□□ -0.6
PDE6A-204ENST00000613228 UBE2Q2Q8WVN8 375 aa11.33□□□□□ -0.6
PDE6A-204ENST00000613228 PLB1Q6P1J6 1458 aa11.33□□□□□ -0.6
PDE6A-204ENST00000613228 PPP4R2Q9NY27 417 aa11.33□□□□□ -0.6
PDE6A-204ENST00000613228 ABCC5O15440 1437 aa11.33□□□□□ -0.6
PDE6A-204ENST00000613228 CC2D1BQ5T0F9 858 aaKnown RBP11.32□□□□□ -0.6
PDE6A-204ENST00000613228 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
PDE6A-204ENST00000613228 MORC1Q86VD1 984 aa11.32□□□□□ -0.6
PDE6A-204ENST00000613228 NUP160Q12769 1436 aa11.32□□□□□ -0.6
PDE6A-204ENST00000613228 PLPPR3Q6T4P5 718 aa11.31□□□□□ -0.6
PDE6A-204ENST00000613228 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
PDE6A-204ENST00000613228 MYBBP1AQ9BQG0 1328 aaKnown RBP11.31□□□□□ -0.6
PDE6A-204ENST00000613228 DDRGK1Q96HY6 314 aa11.31□□□□□ -0.6
PDE6A-204ENST00000613228 HSP90AA1P07900 732 aaKnown RBP11.31□□□□□ -0.6
PDE6A-204ENST00000613228 PDE3BQ13370 1112 aa11.3□□□□□ -0.6
PDE6A-204ENST00000613228 MYH16Q9H6N6 1097 aa11.3□□□□□ -0.6
PDE6A-204ENST00000613228 CNTLNQ9NXG0 1405 aa11.3□□□□□ -0.6
PDE6A-204ENST00000613228 SRPK2P78362 688 aaKnown RBP11.3□□□□□ -0.6
PDE6A-204ENST00000613228 NLRP13Q86W25 1043 aa11.3□□□□□ -0.6
PDE6A-204ENST00000613228 SALL2Q9Y467 1007 aaPredicted RBP11.29□□□□□ -0.6
PDE6A-204ENST00000613228 TERF2IPQ9NYB0 399 aa11.29□□□□□ -0.6
PDE6A-204ENST00000613228 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.29□□□□□ -0.6
PDE6A-204ENST00000613228 SCAPERQ9BY12 1400 aa11.29□□□□□ -0.6
PDE6A-204ENST00000613228 ARHGEF11O15085 1522 aa11.29□□□□□ -0.6
PDE6A-204ENST00000613228 CCDC7Q96M83 1385 aa11.28□□□□□ -0.6
PDE6A-204ENST00000613228 CDK11BP21127 795 aaKnown RBP11.28□□□□□ -0.6
PDE6A-204ENST00000613228 TRIM44Q96DX7 344 aaPredicted RBP11.28□□□□□ -0.6
PDE6A-204ENST00000613228 NUP153P49790 1475 aaKnown RBP11.28□□□□□ -0.6
PDE6A-204ENST00000613228 VSIG10Q8N0Z9 540 aa11.28□□□□□ -0.6
PDE6A-204ENST00000613228 EID1Q9Y6B2 187 aa11.28□□□□□ -0.6
PDE6A-204ENST00000613228 HAP1P54257 671 aaPredicted RBP11.27□□□□□ -0.6
PDE6A-204ENST00000613228 SHANK2Q9UPX8 1470 aa11.27□□□□□ -0.61
PDE6A-204ENST00000613228 CALD1Q05682 793 aaKnown RBP11.27□□□□□ -0.61
PDE6A-204ENST00000613228 NGEFQ8N5V2 710 aa11.26□□□□□ -0.61
PDE6A-204ENST00000613228 TRHP20396 242 aaPredicted RBP11.26□□□□□ -0.61
PDE6A-204ENST00000613228 C14orf37Q86TY3 774 aa11.26□□□□□ -0.61
PDE6A-204ENST00000613228 GPATCH8Q9UKJ3 1502 aaKnown RBP11.25□□□□□ -0.61
PDE6A-204ENST00000613228 MLECQ14165 292 aa11.25□□□□□ -0.61
PDE6A-204ENST00000613228 EVC2Q86UK5 1308 aa11.25□□□□□ -0.61
PDE6A-204ENST00000613228 RPGRIP1LQ68CZ1 1315 aa11.25□□□□□ -0.61
PDE6A-204ENST00000613228 ST20-MTHFSA0A0A6YYL1 179 aa11.24□□□□□ -0.61
PDE6A-204ENST00000613228 CYB5RLQ6IPT4 315 aa11.24□□□□□ -0.61
PDE6A-204ENST00000613228 WASHC2AQ641Q2 1341 aa11.23□□□□□ -0.61
PDE6A-204ENST00000613228 FAM69CQ0P6D2 419 aa11.23□□□□□ -0.61
PDE6A-204ENST00000613228 NCOA1Q15788 1441 aa11.23□□□□□ -0.61
PDE6A-204ENST00000613228 ATP10BO94823 1461 aa11.23□□□□□ -0.61
PDE6A-204ENST00000613228 ERBINQ96RT1 1412 aa11.22□□□□□ -0.61
PDE6A-204ENST00000613228 PRKRIP1Q9H875 184 aaPredicted RBP11.22□□□□□ -0.61
PDE6A-204ENST00000613228 DISP1Q96F81 1524 aa11.22□□□□□ -0.61
PDE6A-204ENST00000613228 ANKRD30BQ9BXX2 1392 aa11.22□□□□□ -0.61
PDE6A-204ENST00000613228 CGNL1Q0VF96 1302 aa11.22□□□□□ -0.61
PDE6A-204ENST00000613228 DUOX2Q9NRD8 1548 aa11.21□□□□□ -0.61
PDE6A-204ENST00000613228 PLCH2O75038 1416 aa11.21□□□□□ -0.62
PDE6A-204ENST00000613228 ADGRL1O94910 1474 aa11.21□□□□□ -0.62
PDE6A-204ENST00000613228 FANCIQ9NVI1 1328 aa11.21□□□□□ -0.62
PDE6A-204ENST00000613228 ABCC2Q92887 1545 aa11.2□□□□□ -0.62
PDE6A-204ENST00000613228 HSP90AA2PQ14568 343 aaPredicted RBP11.2□□□□□ -0.62
PDE6A-204ENST00000613228 FTSJ3Q8IY81 847 aaKnown RBP11.2□□□□□ -0.62
PDE6A-204ENST00000613228 KIF7Q2M1P5 1343 aa11.19□□□□□ -0.62
PDE6A-204ENST00000613228 ZBED9Q6R2W3 1325 aa11.19□□□□□ -0.62
PDE6A-204ENST00000613228 CHMP4AQ9BY43 222 aa11.19□□□□□ -0.62
PDE6A-204ENST00000613228 CD109Q6YHK3 1445 aa11.19□□□□□ -0.62
PDE6A-204ENST00000613228 STK26Q9P289 416 aa11.19□□□□□ -0.62
PDE6A-204ENST00000613228 DNMT1P26358 1616 aaKnown RBP11.19□□□□□ -0.62
PDE6A-204ENST00000613228 PPP6R1Q9UPN7 881 aa11.18□□□□□ -0.62
PDE6A-204ENST00000613228 RPRD2Q5VT52 1461 aaKnown RBP11.18□□□□□ -0.62
PDE6A-204ENST00000613228 BRD4O60885 1362 aaPredicted RBP11.18□□□□□ -0.62
PDE6A-204ENST00000613228 AFAP1Q8N556 730 aa11.18□□□□□ -0.62
PDE6A-204ENST00000613228 PANK3Q9H999 370 aa11.18□□□□□ -0.62
PDE6A-204ENST00000613228 CENPJQ9HC77 1338 aaPredicted RBP11.18□□□□□ -0.62
PDE6A-204ENST00000613228 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
PDE6A-204ENST00000613228 CEP170Q5SW79 1584 aa11.17□□□□□ -0.62
PDE6A-204ENST00000613228 WDR7Q9Y4E6 1490 aa11.17□□□□□ -0.62
PDE6A-204ENST00000613228 L1TD1Q5T7N2 865 aaKnown RBP11.17□□□□□ -0.62
PDE6A-204ENST00000613228 SLC52A1Q9NWF4 448 aa11.17□□□□□ -0.62
PDE6A-204ENST00000613228 CFAP44Q96MT7 982 aa11.17□□□□□ -0.62
PDE6A-204ENST00000613228 LMOD3Q0VAK6 560 aa11.16□□□□□ -0.62
PDE6A-204ENST00000613228 FANCAO15360 1455 aa11.16□□□□□ -0.62
PDE6A-204ENST00000613228 ADGRL2O95490 1459 aa11.16□□□□□ -0.62
PDE6A-204ENST00000613228 IRX6P78412 446 aaPredicted RBP11.16□□□□□ -0.62
PDE6A-204ENST00000613228 FAM135AQ9P2D6 1515 aa11.15□□□□□ -0.62
PDE6A-204ENST00000613228 RTEL1-TNFRSF6BF6WH68 1400 aa11.15□□□□□ -0.62
PDE6A-204ENST00000613228 IPO8O15397 1037 aaKnown RBP11.15□□□□□ -0.62
PDE6A-204ENST00000613228 BECN1Q14457 450 aa11.15□□□□□ -0.62
PDE6A-204ENST00000613228 RCAN3Q9UKA8 241 aa11.15□□□□□ -0.62
PDE6A-204ENST00000613228 POGZQ7Z3K3 1410 aa11.15□□□□□ -0.63
PDE6A-204ENST00000613228 GOLGA2Q08379 1002 aa11.14□□□□□ -0.63
PDE6A-204ENST00000613228 USP35Q9P2H5 1018 aa11.14□□□□□ -0.63
PDE6A-204ENST00000613228 TRAK1Q9UPV9 953 aa11.14□□□□□ -0.63
PDE6A-204ENST00000613228 DENND4BO75064 1496 aaPredicted RBP11.13□□□□□ -0.63
PDE6A-204ENST00000613228 MAPKBP1O60336 1514 aa11.13□□□□□ -0.63
PDE6A-204ENST00000613228 CASC1Q6TDU7 716 aa11.13□□□□□ -0.63
PDE6A-204ENST00000613228 DHX29Q7Z478 1369 aaKnown RBP11.12□□□□□ -0.63
PDE6A-204ENST00000613228 SAFB2Q14151 953 aaKnown RBP eCLIP11.12□□□□□ -0.63
PDE6A-204ENST00000613228 TEX14Q8IWB6 1497 aa11.12□□□□□ -0.63
PDE6A-204ENST00000613228 LAS1LQ9Y4W2 734 aaKnown RBP11.12□□□□□ -0.63
PDE6A-204ENST00000613228 UHRF1BP1LA0JNW5 1464 aa11.11□□□□□ -0.63
PDE6A-204ENST00000613228 A0A0U1RQG5 324 aaPredicted RBP11.11□□□□□ -0.63
PDE6A-204ENST00000613228 ADGBQ8N7X0 1667 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms