RNA–Protein interactions for RNA: ENST00000613146.4

ACACA-228, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 3,974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-228ENST00000613146 CCDC144AA2RUR9 1427 aa10.54□□□□□ -0.72
ACACA-228ENST00000613146 WDR7Q9Y4E6 1490 aa10.54□□□□□ -0.72
ACACA-228ENST00000613146 KDM5BQ9UGL1 1544 aa10.54□□□□□ -0.72
ACACA-228ENST00000613146 USP47Q96K76 1375 aa10.53□□□□□ -0.72
ACACA-228ENST00000613146 ROCK2O75116 1388 aaKnown RBP10.53□□□□□ -0.72
ACACA-228ENST00000613146 MRS2Q9HD23 443 aa10.53□□□□□ -0.72
ACACA-228ENST00000613146 CD109Q6YHK3 1445 aa10.53□□□□□ -0.72
ACACA-228ENST00000613146 ADGRL1O94910 1474 aa10.52□□□□□ -0.72
ACACA-228ENST00000613146 SAFB2Q14151 953 aaKnown RBP eCLIP10.52□□□□□ -0.73
ACACA-228ENST00000613146 PREX2Q70Z35 1606 aa10.51□□□□□ -0.73
ACACA-228ENST00000613146 ADGRL2O95490 1459 aa10.51□□□□□ -0.73
ACACA-228ENST00000613146 CC2D1BQ5T0F9 858 aaKnown RBP10.5□□□□□ -0.73
ACACA-228ENST00000613146 WASHC2CQ9Y4E1 1318 aa10.5□□□□□ -0.73
ACACA-228ENST00000613146 MYO5CQ9NQX4 1742 aa10.5□□□□□ -0.73
ACACA-228ENST00000613146 CCDC7Q96M83 1385 aa10.5□□□□□ -0.73
ACACA-228ENST00000613146 FAM135AQ9P2D6 1515 aa10.5□□□□□ -0.73
ACACA-228ENST00000613146 TEX14Q8IWB6 1497 aa10.49□□□□□ -0.73
ACACA-228ENST00000613146 ADGBQ8N7X0 1667 aa10.49□□□□□ -0.73
ACACA-228ENST00000613146 CFAP70Q5T0N1 1121 aa10.48□□□□□ -0.73
ACACA-228ENST00000613146 TMEM132EQ6IEE7 984 aa10.48□□□□□ -0.73
ACACA-228ENST00000613146 CROCC2H7BZ55 1655 aa10.47□□□□□ -0.73
ACACA-228ENST00000613146 FKBP8Q14318 412 aa10.47□□□□□ -0.73
ACACA-228ENST00000613146 PRKRIP1Q9H875 184 aaPredicted RBP10.47□□□□□ -0.73
ACACA-228ENST00000613146 TRHP20396 242 aaPredicted RBP10.46□□□□□ -0.73
ACACA-228ENST00000613146 PLA2R1Q13018 1463 aa10.46□□□□□ -0.74
ACACA-228ENST00000613146 STK26Q9P289 416 aa10.45□□□□□ -0.74
ACACA-228ENST00000613146 UHRF1BP1LA0JNW5 1464 aa10.45□□□□□ -0.74
ACACA-228ENST00000613146 ARID4BQ4LE39 1312 aaPredicted RBP10.45□□□□□ -0.74
ACACA-228ENST00000613146 FBXO31Q5XUX0 539 aaPredicted RBP10.45□□□□□ -0.74
ACACA-228ENST00000613146 SHANK2Q9UPX8 1470 aa10.45□□□□□ -0.74
ACACA-228ENST00000613146 TRAK1Q9UPV9 953 aa10.45□□□□□ -0.74
ACACA-228ENST00000613146 KANK1Q14678 1352 aa10.44□□□□□ -0.74
ACACA-228ENST00000613146 STAG3Q9UJ98 1225 aa10.43□□□□□ -0.74
ACACA-228ENST00000613146 ARHGEF5Q12774 1597 aa10.43□□□□□ -0.74
ACACA-228ENST00000613146 ADGRF5Q8IZF2 1346 aa10.43□□□□□ -0.74
ACACA-228ENST00000613146 UGGT1Q9NYU2 1555 aa10.43□□□□□ -0.74
ACACA-228ENST00000613146 TSPOAP1O95153 1857 aa10.43□□□□□ -0.74
ACACA-228ENST00000613146 TNNT2P45379 298 aaPredicted RBP10.42□□□□□ -0.74
ACACA-228ENST00000613146 ABCC1P33527 1531 aa10.42□□□□□ -0.74
ACACA-228ENST00000613146 TMC1Q8TDI8 760 aa10.42□□□□□ -0.74
ACACA-228ENST00000613146 SUPT16HQ9Y5B9 1047 aaKnown RBP10.42□□□□□ -0.74
ACACA-228ENST00000613146 PANK3Q9H999 370 aa10.41□□□□□ -0.74
ACACA-228ENST00000613146 DHX29Q7Z478 1369 aaKnown RBP10.4□□□□□ -0.74
ACACA-228ENST00000613146 DUOX2Q9NRD8 1548 aa10.4□□□□□ -0.74
ACACA-228ENST00000613146 A2MP01023 1474 aa10.4□□□□□ -0.75
ACACA-228ENST00000613146 CCER2I3L3R5 266 aa10.4□□□□□ -0.75
ACACA-228ENST00000613146 CNTLNQ9NXG0 1405 aa10.39□□□□□ -0.75
ACACA-228ENST00000613146 YEATS2Q9ULM3 1422 aa10.39□□□□□ -0.75
ACACA-228ENST00000613146 ATP7AQ04656 1500 aa10.39□□□□□ -0.75
ACACA-228ENST00000613146 SPATA31E1Q6ZUB1 1445 aa10.38□□□□□ -0.75
ACACA-228ENST00000613146 DISP3Q9P2K9 1392 aa10.38□□□□□ -0.75
ACACA-228ENST00000613146 IDI1Q13907 227 aa10.36□□□□□ -0.75
ACACA-228ENST00000613146 BCORL1Q5H9F3 1711 aa10.36□□□□□ -0.75
ACACA-228ENST00000613146 ZFYVE16Q7Z3T8 1539 aa10.36□□□□□ -0.75
ACACA-228ENST00000613146 PRAG1Q86YV5 1406 aa10.36□□□□□ -0.75
ACACA-228ENST00000613146 ERBINQ96RT1 1412 aa10.36□□□□□ -0.75
ACACA-228ENST00000613146 TMF1P82094 1093 aa10.36□□□□□ -0.75
ACACA-228ENST00000613146 ESF1Q9H501 851 aaKnown RBP10.36□□□□□ -0.75
ACACA-228ENST00000613146 NEFLP07196 543 aa10.35□□□□□ -0.75
ACACA-228ENST00000613146 CEBPAP49715 358 aaPredicted RBP10.35□□□□□ -0.75
ACACA-228ENST00000613146 TESK2Q96S53 571 aa10.34□□□□□ -0.75
ACACA-228ENST00000613146 ATP10AO60312 1499 aa10.33□□□□□ -0.76
ACACA-228ENST00000613146 ZNF518AQ6AHZ1 1483 aa10.33□□□□□ -0.76
ACACA-228ENST00000613146 ABCA9Q8IUA7 1624 aa10.33□□□□□ -0.76
ACACA-228ENST00000613146 NUTM2FA1L443 756 aa10.33□□□□□ -0.76
ACACA-228ENST00000613146 RIMBP3CA6NJZ7 1639 aa10.32□□□□□ -0.76
ACACA-228ENST00000613146 RIMBP3BA6NNM3 1639 aa10.32□□□□□ -0.76
ACACA-228ENST00000613146 RIMBP3Q9UFD9 1639 aa10.32□□□□□ -0.76
ACACA-228ENST00000613146 KNSTRNQ9Y448 316 aa10.31□□□□□ -0.76
ACACA-228ENST00000613146 RTEL1-TNFRSF6BF6WH68 1400 aa10.31□□□□□ -0.76
ACACA-228ENST00000613146 NOS1P29475 1434 aa10.31□□□□□ -0.76
ACACA-228ENST00000613146 POGZQ7Z3K3 1410 aa10.31□□□□□ -0.76
ACACA-228ENST00000613146 MAST1Q9Y2H9 1570 aa10.31□□□□□ -0.76
ACACA-228ENST00000613146 RALGAPBQ86X10 1494 aa10.31□□□□□ -0.76
ACACA-228ENST00000613146 SLC12A5Q9H2X9 1139 aa10.3□□□□□ -0.76
ACACA-228ENST00000613146 E9PCH4 1651 aa10.3□□□□□ -0.76
ACACA-228ENST00000613146 KDM5DQ9BY66 1539 aa10.3□□□□□ -0.76
ACACA-228ENST00000613146 KIDINS220Q9ULH0 1771 aa10.3□□□□□ -0.76
ACACA-228ENST00000613146 MINK1Q8N4C8 1332 aaPredicted RBP10.3□□□□□ -0.76
ACACA-228ENST00000613146 CABP2Q9NPB3 220 aa10.3□□□□□ -0.76
ACACA-228ENST00000613146 PLXNC1O60486 1568 aa10.29□□□□□ -0.76
ACACA-228ENST00000613146 PLEKHG5O94827 1062 aa10.29□□□□□ -0.76
ACACA-228ENST00000613146 NPATQ14207 1427 aa10.29□□□□□ -0.76
ACACA-228ENST00000613146 PRDM15P57071 1507 aaPredicted RBP10.29□□□□□ -0.76
ACACA-228ENST00000613146 CCDC146Q8IYE0 955 aa10.28□□□□□ -0.76
ACACA-228ENST00000613146 UHRF1BP1Q6BDS2 1440 aa10.28□□□□□ -0.76
ACACA-228ENST00000613146 KDM5CP41229 1560 aa10.28□□□□□ -0.76
ACACA-228ENST00000613146 UNC13BO14795 1591 aa10.28□□□□□ -0.76
ACACA-228ENST00000613146 NEUROD2Q15784 382 aa10.28□□□□□ -0.76
ACACA-228ENST00000613146 IQGAP3Q86VI3 1631 aa10.28□□□□□ -0.76
ACACA-228ENST00000613146 SRPK2P78362 688 aaKnown RBP10.27□□□□□ -0.77
ACACA-228ENST00000613146 POGKQ9P215 609 aa10.27□□□□□ -0.77
ACACA-228ENST00000613146 CLTCL1P53675 1640 aa10.27□□□□□ -0.77
ACACA-228ENST00000613146 CEP152O94986 1710 aa10.26□□□□□ -0.77
ACACA-228ENST00000613146 PER1O15534 1290 aaPredicted RBP10.26□□□□□ -0.77
ACACA-228ENST00000613146 FBLN1P23142 703 aa10.26□□□□□ -0.77
ACACA-228ENST00000613146 WAPLQ7Z5K2 1190 aa10.26□□□□□ -0.77
ACACA-228ENST00000613146 PNISRQ8TF01 805 aaKnown RBP10.25□□□□□ -0.77
ACACA-228ENST00000613146 CDCA7LQ96GN5 454 aa10.25□□□□□ -0.77
ACACA-228ENST00000613146 KTN1Q86UP2 1357 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms