RNA–Protein interactions for RNA: ENST00000612674.1

USP12-202, Transcript of ubiquitin specific peptidase 12, humanhuman

TSL 2

Gene USP12, Length 712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-202ENST00000612674 IFFO2Q5TF58 517 aa12.86□□□□□ -0.35
USP12-202ENST00000612674 NBPF3Q9H094 633 aa12.85□□□□□ -0.35
USP12-202ENST00000612674 PPP1R3GB7ZBB8 358 aa12.83□□□□□ -0.36
USP12-202ENST00000612674 COL9A1P20849 921 aa12.83□□□□□ -0.36
USP12-202ENST00000612674 PROX2Q3B8N5 592 aa12.83□□□□□ -0.36
USP12-202ENST00000612674 RABGEF1Q9UJ41 708 aa12.81□□□□□ -0.36
USP12-202ENST00000612674 PHF14O94880 888 aa12.79□□□□□ -0.36
USP12-202ENST00000612674 TYW1BQ6NUM6 668 aa12.78□□□□□ -0.36
USP12-202ENST00000612674 FBXW7Q969H0 707 aa12.78□□□□□ -0.36
USP12-202ENST00000612674 A0A0G2JS52 829 aa12.77□□□□□ -0.37
USP12-202ENST00000612674 RGS20O76081 388 aa12.76□□□□□ -0.37
USP12-202ENST00000612674 SHROOM4Q9ULL8 1493 aa12.76□□□□□ -0.37
USP12-202ENST00000612674 CAMK2BQ13554 666 aa12.75□□□□□ -0.37
USP12-202ENST00000612674 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
USP12-202ENST00000612674 ANKK1Q8NFD2 765 aa12.73□□□□□ -0.37
USP12-202ENST00000612674 KIAA1468Q9P260 1216 aa12.72□□□□□ -0.37
USP12-202ENST00000612674 DPYSL4O14531 572 aa12.71□□□□□ -0.37
USP12-202ENST00000612674 BCAMP50895 628 aa12.71□□□□□ -0.37
USP12-202ENST00000612674 EIF4G1Q04637 1599 aaKnown RBP12.71□□□□□ -0.37
USP12-202ENST00000612674 C6orf132Q5T0Z8 1188 aa12.7□□□□□ -0.38
USP12-202ENST00000612674 LAPTM4BQ86VI4 370 aa12.7□□□□□ -0.38
USP12-202ENST00000612674 EPAS1Q99814 870 aa12.69□□□□□ -0.38
USP12-202ENST00000612674 SOWAHBA6NEL2 793 aa12.68□□□□□ -0.38
USP12-202ENST00000612674 ZFRQ96KR1 1074 aaKnown RBP12.68□□□□□ -0.38
USP12-202ENST00000612674 ITGBL1O95965 494 aaPredicted RBP12.67□□□□□ -0.38
USP12-202ENST00000612674 ONECUT3O60422 494 aaPredicted RBP12.66□□□□□ -0.38
USP12-202ENST00000612674 SEPT9Q9UHD8 586 aaPredicted RBP12.66□□□□□ -0.38
USP12-202ENST00000612674 DDX12PQ92771 950 aa12.64□□□□□ -0.39
USP12-202ENST00000612674 RBM33Q96EV2 1170 aaKnown RBP12.64□□□□□ -0.39
USP12-202ENST00000612674 IRX2Q9BZI1 471 aaPredicted RBP12.64□□□□□ -0.39
USP12-202ENST00000612674 TRIM6-TRIM34B2RNG4 842 aa12.63□□□□□ -0.39
USP12-202ENST00000612674 WBP1LQ9NX94 342 aa12.62□□□□□ -0.39
USP12-202ENST00000612674 NYAP1Q6ZVC0 841 aa12.59□□□□□ -0.39
USP12-202ENST00000612674 FAM98CQ17RN3 349 aaKnown RBP12.58□□□□□ -0.4
USP12-202ENST00000612674 TSR1Q2NL82 804 aaKnown RBP12.55□□□□□ -0.4
USP12-202ENST00000612674 EN1Q05925 392 aaPredicted RBP12.54□□□□□ -0.4
USP12-202ENST00000612674 NBR1Q14596 966 aa12.54□□□□□ -0.4
USP12-202ENST00000612674 PDIA6Q15084 440 aa12.54□□□□□ -0.4
USP12-202ENST00000612674 BBXQ8WY36 941 aaPredicted RBP12.54□□□□□ -0.4
USP12-202ENST00000612674 TSKSQ9UJT2 592 aa12.54□□□□□ -0.4
USP12-202ENST00000612674 KCNC4Q03721 635 aa12.53□□□□□ -0.4
USP12-202ENST00000612674 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.53□□□□□ -0.4
USP12-202ENST00000612674 TSR3Q9UJK0 312 aaKnown RBP12.53□□□□□ -0.4
USP12-202ENST00000612674 SCRIBQ14160 1630 aa12.52□□□□□ -0.4
USP12-202ENST00000612674 LRCH3Q96II8 777 aa12.52□□□□□ -0.41
USP12-202ENST00000612674 HPS5Q9UPZ3 1129 aa12.52□□□□□ -0.41
USP12-202ENST00000612674 CUX2O14529 1486 aa12.52□□□□□ -0.41
USP12-202ENST00000612674 MAP3K7O43318 606 aa12.51□□□□□ -0.41
USP12-202ENST00000612674 PACS2Q86VP3 889 aa12.49□□□□□ -0.41
USP12-202ENST00000612674 SPDYE16A6NNV3 312 aaPredicted RBP12.46□□□□□ -0.41
USP12-202ENST00000612674 PRIM1P49642 420 aaKnown RBP12.46□□□□□ -0.41
USP12-202ENST00000612674 CDCA7LQ96GN5 454 aa12.45□□□□□ -0.42
USP12-202ENST00000612674 FAM198AQ9UFP1 575 aa12.45□□□□□ -0.42
USP12-202ENST00000612674 C3orf80F5H4A9 247 aa12.43□□□□□ -0.42
USP12-202ENST00000612674 SMAPO00193 183 aa12.43□□□□□ -0.42
USP12-202ENST00000612674 PRSS12P56730 875 aa12.43□□□□□ -0.42
USP12-202ENST00000612674 SPRYD3Q8NCJ5 442 aa12.42□□□□□ -0.42
USP12-202ENST00000612674 PPP4CP60510 307 aa12.41□□□□□ -0.42
USP12-202ENST00000612674 E2F4Q16254 413 aa12.41□□□□□ -0.42
USP12-202ENST00000612674 SAMD7Q7Z3H4 446 aa12.41□□□□□ -0.42
USP12-202ENST00000612674 ARIH1Q9Y4X5 557 aaPredicted RBP12.4□□□□□ -0.42
USP12-202ENST00000612674 DCAF1Q9Y4B6 1507 aa12.4□□□□□ -0.42
USP12-202ENST00000612674 GRXCR2A6NFK2 248 aa12.39□□□□□ -0.43
USP12-202ENST00000612674 TJAP1Q5JTD0 557 aa12.38□□□□□ -0.43
USP12-202ENST00000612674 Q6ZNB5 142 aa12.38□□□□□ -0.43
USP12-202ENST00000612674 CERKQ8TCT0 537 aa12.37□□□□□ -0.43
USP12-202ENST00000612674 TATDN2Q93075 761 aa12.37□□□□□ -0.43
USP12-202ENST00000612674 ERCC6Q03468 1493 aa12.37□□□□□ -0.43
USP12-202ENST00000612674 ZCCHC6Q5VYS8 1495 aaKnown RBP12.36□□□□□ -0.43
USP12-202ENST00000612674 CDHR5Q9HBB8 845 aa12.35□□□□□ -0.43
USP12-202ENST00000612674 PNMA3Q9UL41 463 aa12.35□□□□□ -0.43
USP12-202ENST00000612674 OSBPP22059 807 aa12.34□□□□□ -0.43
USP12-202ENST00000612674 NBPF26B4DH59 902 aa12.33□□□□□ -0.44
USP12-202ENST00000612674 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.32□□□□□ -0.44
USP12-202ENST00000612674 MTRQ99707 1265 aa12.31□□□□□ -0.44
USP12-202ENST00000612674 NUDT18Q6ZVK8 323 aa12.3□□□□□ -0.44
USP12-202ENST00000612674 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
USP12-202ENST00000612674 LCE2BO14633 110 aa12.28□□□□□ -0.44
USP12-202ENST00000612674 IL21Q9HBE4 155 aa12.28□□□□□ -0.44
USP12-202ENST00000612674 RBM27Q9P2N5 1060 aaKnown RBP12.28□□□□□ -0.44
USP12-202ENST00000612674 PAXIP1Q6ZW49 1069 aaPredicted RBP12.27□□□□□ -0.45
USP12-202ENST00000612674 ZNF516Q92618 1163 aa12.27□□□□□ -0.45
USP12-202ENST00000612674 CFAP44Q96MT7 982 aa12.27□□□□□ -0.45
USP12-202ENST00000612674 APLP1P51693 650 aa12.26□□□□□ -0.45
USP12-202ENST00000612674 LAPTM4AQ15012 233 aa12.26□□□□□ -0.45
USP12-202ENST00000612674 PPP1R18Q6NYC8 613 aa12.26□□□□□ -0.45
USP12-202ENST00000612674 PRKD2Q9BZL6 878 aa12.26□□□□□ -0.45
USP12-202ENST00000612674 GFRA3O60609 400 aa12.25□□□□□ -0.45
USP12-202ENST00000612674 RNF40O75150 1001 aa12.25□□□□□ -0.45
USP12-202ENST00000612674 NPDC1Q9NQX5 325 aaPredicted RBP12.25□□□□□ -0.45
USP12-202ENST00000612674 TTC13Q8NBP0 860 aa12.24□□□□□ -0.45
USP12-202ENST00000612674 HDGFP51858 240 aaKnown RBP12.23□□□□□ -0.45
USP12-202ENST00000612674 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
USP12-202ENST00000612674 PADI6Q6TGC4 694 aa12.22□□□□□ -0.45
USP12-202ENST00000612674 NKX2-3Q8TAU0 364 aa12.2□□□□□ -0.46
USP12-202ENST00000612674 SWT1Q5T5J6 900 aaKnown RBP12.19□□□□□ -0.46
USP12-202ENST00000612674 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.19□□□□□ -0.46
USP12-202ENST00000612674 TRAF7Q6Q0C0 670 aa12.18□□□□□ -0.46
USP12-202ENST00000612674 V9GY48 417 aaPredicted RBP12.18□□□□□ -0.46
USP12-202ENST00000612674 NRG2O14511 850 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms