RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 HDGFL2Q7Z4V5 671 aaPredicted RBP11.4□□□□□ -0.58
COL25A1-208ENST00000610288 FHOD3Q2V2M9 1422 aa11.4□□□□□ -0.58
COL25A1-208ENST00000610288 CGNL1Q0VF96 1302 aa11.4□□□□□ -0.58
COL25A1-208ENST00000610288 CCDC18Q5T9S5 1454 aa11.4□□□□□ -0.58
COL25A1-208ENST00000610288 CNTLNQ9NXG0 1405 aa11.4□□□□□ -0.58
COL25A1-208ENST00000610288 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.4□□□□□ -0.59
COL25A1-208ENST00000610288 DRC7Q8IY82 874 aa11.39□□□□□ -0.59
COL25A1-208ENST00000610288 AEBP2Q6ZN18 517 aaPredicted RBP11.39□□□□□ -0.59
COL25A1-208ENST00000610288 ITPRIPQ8IWB1 547 aa11.39□□□□□ -0.59
COL25A1-208ENST00000610288 PAK3O75914 559 aaPredicted RBP11.39□□□□□ -0.59
COL25A1-208ENST00000610288 TAOK2Q9UL54 1235 aa11.39□□□□□ -0.59
COL25A1-208ENST00000610288 PLIN1O60240 522 aa11.38□□□□□ -0.59
COL25A1-208ENST00000610288 ZNF771Q7L3S4 317 aaPredicted RBP11.38□□□□□ -0.59
COL25A1-208ENST00000610288 CCDC7Q96M83 1385 aa11.38□□□□□ -0.59
COL25A1-208ENST00000610288 RTF1Q92541 710 aaKnown RBP11.38□□□□□ -0.59
COL25A1-208ENST00000610288 CHMP5Q9NZZ3 219 aa11.37□□□□□ -0.59
COL25A1-208ENST00000610288 HNRNPMP52272 730 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL25A1-208ENST00000610288 ZMYND15Q9H091 742 aa11.37□□□□□ -0.59
COL25A1-208ENST00000610288 FAM13BQ9NYF5 915 aa11.37□□□□□ -0.59
COL25A1-208ENST00000610288 CADPSQ9ULU8 1353 aa11.37□□□□□ -0.59
COL25A1-208ENST00000610288 KIF3BO15066 747 aa11.36□□□□□ -0.59
COL25A1-208ENST00000610288 JPH4Q96JJ6 628 aa11.36□□□□□ -0.59
COL25A1-208ENST00000610288 NAP1L2Q9ULW6 460 aaPredicted RBP11.36□□□□□ -0.59
COL25A1-208ENST00000610288 BRPF3Q9ULD4 1205 aa11.36□□□□□ -0.59
COL25A1-208ENST00000610288 DDX49Q9Y6V7 483 aaKnown RBP11.36□□□□□ -0.59
COL25A1-208ENST00000610288 APBB1O00213 710 aa11.35□□□□□ -0.59
COL25A1-208ENST00000610288 PHF14O94880 888 aa11.35□□□□□ -0.59
COL25A1-208ENST00000610288 USP47Q96K76 1375 aa11.35□□□□□ -0.59
COL25A1-208ENST00000610288 CSPP1Q1MSJ5 1256 aa11.35□□□□□ -0.59
COL25A1-208ENST00000610288 ST20-MTHFSA0A0A6YYL1 179 aa11.34□□□□□ -0.59
COL25A1-208ENST00000610288 NGEFQ8N5V2 710 aa11.34□□□□□ -0.59
COL25A1-208ENST00000610288 SMC4Q9NTJ3 1288 aa11.34□□□□□ -0.59
COL25A1-208ENST00000610288 NPHP1O15259 732 aa11.34□□□□□ -0.59
COL25A1-208ENST00000610288 MSH5O43196 834 aa11.34□□□□□ -0.59
COL25A1-208ENST00000610288 E9PSI1 815 aa11.34□□□□□ -0.59
COL25A1-208ENST00000610288 MRE11P49959 708 aa11.33□□□□□ -0.59
COL25A1-208ENST00000610288 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.59
COL25A1-208ENST00000610288 UACAQ9BZF9 1416 aa11.33□□□□□ -0.6
COL25A1-208ENST00000610288 RSPH4AQ5TD94 716 aa11.33□□□□□ -0.6
COL25A1-208ENST00000610288 EIF3AQ14152 1382 aaKnown RBP11.33□□□□□ -0.6
COL25A1-208ENST00000610288 KIF21BO75037 1637 aa11.32□□□□□ -0.6
COL25A1-208ENST00000610288 RRBP1Q9P2E9 1410 aaKnown RBP11.32□□□□□ -0.6
COL25A1-208ENST00000610288 ST18O60284 1047 aa11.32□□□□□ -0.6
COL25A1-208ENST00000610288 CALRP27797 417 aaKnown RBP11.32□□□□□ -0.6
COL25A1-208ENST00000610288 KIF7Q2M1P5 1343 aa11.32□□□□□ -0.6
COL25A1-208ENST00000610288 WASHC2AQ641Q2 1341 aa11.32□□□□□ -0.6
COL25A1-208ENST00000610288 SPAG9O60271 1321 aaKnown RBP11.31□□□□□ -0.6
COL25A1-208ENST00000610288 CCDC146Q8IYE0 955 aa11.31□□□□□ -0.6
COL25A1-208ENST00000610288 GOLGA6L1Q8N7Z2 621 aa11.31□□□□□ -0.6
COL25A1-208ENST00000610288 CCDC66A2RUB6 948 aa11.31□□□□□ -0.6
COL25A1-208ENST00000610288 BACH2Q9BYV9 841 aa11.31□□□□□ -0.6
COL25A1-208ENST00000610288 TAF3Q5VWG9 929 aa11.31□□□□□ -0.6
COL25A1-208ENST00000610288 HTATSF1O43719 755 aaKnown RBP11.3□□□□□ -0.6
COL25A1-208ENST00000610288 KIAA1211Q6ZU35 1233 aa11.3□□□□□ -0.6
COL25A1-208ENST00000610288 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
COL25A1-208ENST00000610288 TERF2IPQ9NYB0 399 aa11.3□□□□□ -0.6
COL25A1-208ENST00000610288 AAMPQ13685 434 aa11.29□□□□□ -0.6
COL25A1-208ENST00000610288 PANK3Q9H999 370 aa11.29□□□□□ -0.6
COL25A1-208ENST00000610288 BRD4O60885 1362 aaPredicted RBP11.29□□□□□ -0.6
COL25A1-208ENST00000610288 ATAD2BQ9ULI0 1458 aa11.28□□□□□ -0.6
COL25A1-208ENST00000610288 COG6Q9Y2V7 657 aa11.28□□□□□ -0.6
COL25A1-208ENST00000610288 TULP1O00294 542 aaPredicted RBP11.28□□□□□ -0.6
COL25A1-208ENST00000610288 FRAT2O75474 233 aaPredicted RBP11.28□□□□□ -0.6
COL25A1-208ENST00000610288 SETQ01105 290 aaPredicted RBP11.28□□□□□ -0.6
COL25A1-208ENST00000610288 NUTM2DQ5VT03 806 aaPredicted RBP11.28□□□□□ -0.6
COL25A1-208ENST00000610288 SMG6Q86US8 1419 aaKnown RBP11.27□□□□□ -0.61
COL25A1-208ENST00000610288 ZKSCAN2Q63HK3 967 aa11.27□□□□□ -0.61
COL25A1-208ENST00000610288 WASHC2CQ9Y4E1 1318 aa11.27□□□□□ -0.61
COL25A1-208ENST00000610288 HMMRO75330 724 aa11.26□□□□□ -0.61
COL25A1-208ENST00000610288 ISY1Q9ULR0 285 aaKnown RBP11.26□□□□□ -0.61
COL25A1-208ENST00000610288 STK31Q9BXU1 1019 aa11.26□□□□□ -0.61
COL25A1-208ENST00000610288 FGD6Q6ZV73 1430 aa11.26□□□□□ -0.61
COL25A1-208ENST00000610288 TRAK1Q9UPV9 953 aa11.25□□□□□ -0.61
COL25A1-208ENST00000610288 CCDC9Q9Y3X0 531 aaKnown RBP11.25□□□□□ -0.61
COL25A1-208ENST00000610288 CCDC144AA2RUR9 1427 aa11.24□□□□□ -0.61
COL25A1-208ENST00000610288 CSB-PGBD3P0DP91 1061 aa11.24□□□□□ -0.61
COL25A1-208ENST00000610288 AKNAQ7Z591 1439 aa11.24□□□□□ -0.61
COL25A1-208ENST00000610288 LRRC9Q6ZRR7 1453 aa11.24□□□□□ -0.61
COL25A1-208ENST00000610288 TRAK2O60296 914 aa11.24□□□□□ -0.61
COL25A1-208ENST00000610288 EID1Q9Y6B2 187 aa11.24□□□□□ -0.61
COL25A1-208ENST00000610288 APAF1O14727 1248 aa11.23□□□□□ -0.61
COL25A1-208ENST00000610288 C22orf23Q9BZE7 217 aa11.23□□□□□ -0.61
COL25A1-208ENST00000610288 KIF16BQ96L93 1317 aa11.23□□□□□ -0.61
COL25A1-208ENST00000610288 CHMP4AQ9BY43 222 aa11.23□□□□□ -0.61
COL25A1-208ENST00000610288 NUCB2P80303 420 aa11.23□□□□□ -0.61
COL25A1-208ENST00000610288 PDCL3Q9H2J4 239 aa11.23□□□□□ -0.61
COL25A1-208ENST00000610288 FAM69CQ0P6D2 419 aa11.23□□□□□ -0.61
COL25A1-208ENST00000610288 SMARCA4P51532 1647 aa11.23□□□□□ -0.61
COL25A1-208ENST00000610288 DDX19BQ9UMR2 479 aa11.22□□□□□ -0.61
COL25A1-208ENST00000610288 ATP6V1DQ9Y5K8 247 aa11.22□□□□□ -0.61
COL25A1-208ENST00000610288 TPM4P67936 248 aa11.22□□□□□ -0.61
COL25A1-208ENST00000610288 NOM1Q5C9Z4 860 aaKnown RBP11.22□□□□□ -0.61
COL25A1-208ENST00000610288 RRP7AQ9Y3A4 280 aaKnown RBP11.22□□□□□ -0.61
COL25A1-208ENST00000610288 ZNF330Q9Y3S2 320 aaPredicted RBP11.22□□□□□ -0.61
COL25A1-208ENST00000610288 NASPP49321 788 aaPredicted RBP11.21□□□□□ -0.61
COL25A1-208ENST00000610288 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.21□□□□□ -0.61
COL25A1-208ENST00000610288 TEX35Q5T0J7 233 aa11.21□□□□□ -0.62
COL25A1-208ENST00000610288 SLC4A10Q6U841 1118 aa11.21□□□□□ -0.62
COL25A1-208ENST00000610288 MIA2Q96PC5 1412 aa11.21□□□□□ -0.62
COL25A1-208ENST00000610288 ANKRD45Q5TZF3 282 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms