RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, human

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-231	ENST00000606377	HMMR	O75330	724 aa		12.5	□□□□□ -0.41
PAX6-231	ENST00000606377	PANK3	Q9H999	370 aa		12.5	□□□□□ -0.41
PAX6-231	ENST00000606377	PTPRG	P23470	1445 aa		12.5	□□□□□ -0.41
PAX6-231	ENST00000606377	NLRP13	Q86W25	1043 aa		12.5	□□□□□ -0.41
PAX6-231	ENST00000606377	ST20-MTHFS	A0A0A6YYL1	179 aa		12.5	□□□□□ -0.41
PAX6-231	ENST00000606377	RBM19	Q9Y4C8	960 aa	Known RBP	12.49	□□□□□ -0.41
PAX6-231	ENST00000606377	SLK	Q9H2G2	1235 aa	Predicted RBP	12.49	□□□□□ -0.41
PAX6-231	ENST00000606377	MSN	P26038	577 aa	Known RBP	12.49	□□□□□ -0.41
PAX6-231	ENST00000606377	CHAF1A	Q13111	956 aa	Predicted RBP	12.48	□□□□□ -0.41
PAX6-231	ENST00000606377	KIF15	Q9NS87	1388 aa		12.48	□□□□□ -0.41
PAX6-231	ENST00000606377	L1TD1	Q5T7N2	865 aa	Known RBP	12.48	□□□□□ -0.41
PAX6-231	ENST00000606377	GBP4	Q96PP9	640 aa		12.48	□□□□□ -0.41
PAX6-231	ENST00000606377	RUSC2	Q8N2Y8	1516 aa		12.47	□□□□□ -0.41
PAX6-231	ENST00000606377	GTF2E1	P29083	439 aa	Predicted RBP	12.47	□□□□□ -0.41
PAX6-231	ENST00000606377	NOL8	Q76FK4	1167 aa	Known RBP	12.47	□□□□□ -0.41
PAX6-231	ENST00000606377	HDAC5	Q9UQL6	1122 aa		12.47	□□□□□ -0.41
PAX6-231	ENST00000606377	UACA	Q9BZF9	1416 aa		12.47	□□□□□ -0.41
PAX6-231	ENST00000606377	EVA1C	P58658	441 aa		12.47	□□□□□ -0.41
PAX6-231	ENST00000606377	COG3	Q96JB2	828 aa		12.47	□□□□□ -0.41
PAX6-231	ENST00000606377	GZF1	Q9H116	711 aa	Predicted RBP	12.47	□□□□□ -0.41
PAX6-231	ENST00000606377	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.47	□□□□□ -0.41
PAX6-231	ENST00000606377	TCERG1	O14776	1098 aa	Known RBP	12.46	□□□□□ -0.41
PAX6-231	ENST00000606377	VGF	O15240	615 aa	Predicted RBP	12.46	□□□□□ -0.41
PAX6-231	ENST00000606377	FRAT2	O75474	233 aa	Predicted RBP	12.46	□□□□□ -0.41
PAX6-231	ENST00000606377	ELL2	O00472	640 aa	Predicted RBP	12.46	□□□□□ -0.42
PAX6-231	ENST00000606377	C1orf141	Q5JVX7	400 aa		12.46	□□□□□ -0.42
PAX6-231	ENST00000606377	EVC2	Q86UK5	1308 aa		12.45	□□□□□ -0.42
PAX6-231	ENST00000606377	FOXD4L1	Q9NU39	408 aa		12.45	□□□□□ -0.42
PAX6-231	ENST00000606377	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.45	□□□□□ -0.42
PAX6-231	ENST00000606377	OSCAR	Q8IYS5	282 aa		12.45	□□□□□ -0.42
PAX6-231	ENST00000606377	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.44	□□□□□ -0.42
PAX6-231	ENST00000606377	PHLDB1	Q86UU1	1377 aa		12.44	□□□□□ -0.42
PAX6-231	ENST00000606377	HTATSF1	O43719	755 aa	Known RBP	12.44	□□□□□ -0.42
PAX6-231	ENST00000606377	TOMM22	Q9NS69	142 aa		12.44	□□□□□ -0.42
PAX6-231	ENST00000606377	CGNL1	Q0VF96	1302 aa		12.44	□□□□□ -0.42
PAX6-231	ENST00000606377	PRDM2	Q13029	1718 aa		12.43	□□□□□ -0.42
PAX6-231	ENST00000606377	BCL2L13	Q9BXK5	485 aa		12.43	□□□□□ -0.42
PAX6-231	ENST00000606377	PTMS	P20962	102 aa		12.42	□□□□□ -0.42
PAX6-231	ENST00000606377	PDE3B	Q13370	1112 aa		12.42	□□□□□ -0.42
PAX6-231	ENST00000606377	NGEF	Q8N5V2	710 aa		12.42	□□□□□ -0.42
PAX6-231	ENST00000606377	DEK	P35659	375 aa	Known RBP	12.41	□□□□□ -0.42
PAX6-231	ENST00000606377	KIAA2012	Q0VF49	1180 aa		12.41	□□□□□ -0.42
PAX6-231	ENST00000606377	GAPVD1	Q14C86	1478 aa		12.4	□□□□□ -0.42
PAX6-231	ENST00000606377	RASSF8	Q8NHQ8	419 aa		12.4	□□□□□ -0.42
PAX6-231	ENST00000606377	MSH5	O43196	834 aa		12.39	□□□□□ -0.43
PAX6-231	ENST00000606377	USP47	Q96K76	1375 aa		12.39	□□□□□ -0.43
PAX6-231	ENST00000606377	RILPL2	Q969X0	211 aa		12.39	□□□□□ -0.43
PAX6-231	ENST00000606377	DHX57	Q6P158	1386 aa	Known RBP	12.39	□□□□□ -0.43
PAX6-231	ENST00000606377	FAM69C	Q0P6D2	419 aa		12.39	□□□□□ -0.43
PAX6-231	ENST00000606377	SYAP1	Q96A49	352 aa	Predicted RBP	12.39	□□□□□ -0.43
PAX6-231	ENST00000606377	EIF2S2	P20042	333 aa	Known RBP	12.39	□□□□□ -0.43
PAX6-231	ENST00000606377	RAD54L2	Q9Y4B4	1467 aa		12.39	□□□□□ -0.43
PAX6-231	ENST00000606377	PLIN1	O60240	522 aa		12.39	□□□□□ -0.43
PAX6-231	ENST00000606377	TEF	Q10587	303 aa		12.39	□□□□□ -0.43
PAX6-231	ENST00000606377	FGD5	Q6ZNL6	1462 aa		12.39	□□□□□ -0.43
PAX6-231	ENST00000606377	PSME1	Q06323	249 aa		12.38	□□□□□ -0.43
PAX6-231	ENST00000606377	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.38	□□□□□ -0.43
PAX6-231	ENST00000606377	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.38	□□□□□ -0.43
PAX6-231	ENST00000606377	NECTIN2	Q92692	538 aa		12.38	□□□□□ -0.43
PAX6-231	ENST00000606377	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.38	□□□□□ -0.43
PAX6-231	ENST00000606377	TPM4	P67936	248 aa		12.37	□□□□□ -0.43
PAX6-231	ENST00000606377	ANKRD45	Q5TZF3	282 aa		12.37	□□□□□ -0.43
PAX6-231	ENST00000606377	TTC5	Q8N0Z6	440 aa		12.37	□□□□□ -0.43
PAX6-231	ENST00000606377	CREBRF	Q8IUR6	639 aa		12.37	□□□□□ -0.43
PAX6-231	ENST00000606377	VPS53	Q5VIR6	699 aa		12.37	□□□□□ -0.43
PAX6-231	ENST00000606377	SYTL4	Q96C24	671 aa	Predicted RBP	12.36	□□□□□ -0.43
PAX6-231	ENST00000606377	KIF16B	Q96L93	1317 aa		12.36	□□□□□ -0.43
PAX6-231	ENST00000606377	MEX3C	Q5U5Q3	659 aa	Known RBP	12.36	□□□□□ -0.43
PAX6-231	ENST00000606377		E9PSI1	815 aa		12.35	□□□□□ -0.43
PAX6-231	ENST00000606377	ST18	O60284	1047 aa		12.35	□□□□□ -0.43
PAX6-231	ENST00000606377	CSPP1	Q1MSJ5	1256 aa		12.35	□□□□□ -0.43
PAX6-231	ENST00000606377	ZKSCAN2	Q63HK3	967 aa		12.35	□□□□□ -0.43
PAX6-231	ENST00000606377	DIAPH1	O60610	1272 aa	Known RBP	12.34	□□□□□ -0.43
PAX6-231	ENST00000606377	CCDC34	Q96HJ3	373 aa		12.34	□□□□□ -0.43
PAX6-231	ENST00000606377	ZNF644	Q9H582	1327 aa	Predicted RBP	12.34	□□□□□ -0.43
PAX6-231	ENST00000606377	MARCH6	O60337	910 aa		12.34	□□□□□ -0.43
PAX6-231	ENST00000606377	APAF1	O14727	1248 aa		12.34	□□□□□ -0.43
PAX6-231	ENST00000606377	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.33	□□□□□ -0.44
PAX6-231	ENST00000606377	NEXN	Q0ZGT2	675 aa		12.33	□□□□□ -0.44
PAX6-231	ENST00000606377	NOC3L	Q8WTT2	800 aa	Known RBP	12.33	□□□□□ -0.44
PAX6-231	ENST00000606377	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.33	□□□□□ -0.44
PAX6-231	ENST00000606377	CRBN	Q96SW2	442 aa		12.32	□□□□□ -0.44
PAX6-231	ENST00000606377	RIPK4	P57078	832 aa		12.32	□□□□□ -0.44
PAX6-231	ENST00000606377	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	12.32	□□□□□ -0.44
PAX6-231	ENST00000606377	IPO9	Q96P70	1041 aa	Known RBP	12.32	□□□□□ -0.44
PAX6-231	ENST00000606377	COG6	Q9Y2V7	657 aa		12.32	□□□□□ -0.44
PAX6-231	ENST00000606377	MYOM3	Q5VTT5	1437 aa		12.32	□□□□□ -0.44
PAX6-231	ENST00000606377	AQR	O60306	1485 aa	Known RBP eCLIP	12.32	□□□□□ -0.44
PAX6-231	ENST00000606377	SF3A1	Q15459	793 aa	Known RBP	12.32	□□□□□ -0.44
PAX6-231	ENST00000606377		H3BQV1	296 aa		12.31	□□□□□ -0.44
PAX6-231	ENST00000606377	IFFO2	Q5TF58	517 aa		12.31	□□□□□ -0.44
PAX6-231	ENST00000606377	IGF1R	P08069	1367 aa		12.31	□□□□□ -0.44
PAX6-231	ENST00000606377	PDE4C	Q08493	712 aa		12.31	□□□□□ -0.44
PAX6-231	ENST00000606377	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.31	□□□□□ -0.44
PAX6-231	ENST00000606377	GOLGA6L3	A6NEY3	463 aa		12.31	□□□□□ -0.44
PAX6-231	ENST00000606377	EXOC6	Q8TAG9	804 aa		12.31	□□□□□ -0.44
PAX6-231	ENST00000606377	RRP1	P56182	461 aa	Known RBP	12.3	□□□□□ -0.44
PAX6-231	ENST00000606377	NUTM2G	Q5VZR2	741 aa		12.3	□□□□□ -0.44
PAX6-231	ENST00000606377	ATF3	P18847	181 aa		12.29	□□□□□ -0.44
PAX6-231	ENST00000606377	KIF3A	Q9Y496	699 aa		12.29	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms