RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 MAGI2Q86UL8 1455 aa20.64■□□□□ 0.89
HLA-F-230ENST00000606273 SIGLEC1Q9BZZ2 1709 aa20.64■□□□□ 0.89
HLA-F-230ENST00000606273 TIE1P35590 1138 aa20.63■□□□□ 0.89
HLA-F-230ENST00000606273 TTC37Q6PGP7 1564 aa20.63■□□□□ 0.89
HLA-F-230ENST00000606273 ZFYVE16Q7Z3T8 1539 aa20.63■□□□□ 0.89
HLA-F-230ENST00000606273 C7P10643 843 aa20.62■□□□□ 0.89
HLA-F-230ENST00000606273 ZMYM4Q5VZL5 1548 aa20.62■□□□□ 0.89
HLA-F-230ENST00000606273 EFCAB5A4FU69 1503 aa20.6■□□□□ 0.89
HLA-F-230ENST00000606273 NUP153P49790 1475 aaKnown RBP20.6■□□□□ 0.89
HLA-F-230ENST00000606273 RAPGEF6Q8TEU7 1601 aa20.58■□□□□ 0.89
HLA-F-230ENST00000606273 IFNL1Q8IU54 200 aa20.58■□□□□ 0.89
HLA-F-230ENST00000606273 STRCQ7RTU9 1775 aa20.58■□□□□ 0.89
HLA-F-230ENST00000606273 ARHGEF12Q9NZN5 1544 aa20.58■□□□□ 0.88
HLA-F-230ENST00000606273 PTPRTO14522 1441 aa20.57■□□□□ 0.88
HLA-F-230ENST00000606273 ATP10AO60312 1499 aa20.56■□□□□ 0.88
HLA-F-230ENST00000606273 TTLL13PA6NNM8 815 aa20.55■□□□□ 0.88
HLA-F-230ENST00000606273 PYGBP11216 843 aa20.55■□□□□ 0.88
HLA-F-230ENST00000606273 HECW1Q76N89 1606 aa20.55■□□□□ 0.88
HLA-F-230ENST00000606273 PREX1Q8TCU6 1659 aa20.54■□□□□ 0.88
HLA-F-230ENST00000606273 FER1L4A9Z1Z3 1794 aa20.54■□□□□ 0.88
HLA-F-230ENST00000606273 UHRF1BP1Q6BDS2 1440 aa20.54■□□□□ 0.88
HLA-F-230ENST00000606273 SCAPERQ9BY12 1400 aa20.54■□□□□ 0.88
HLA-F-230ENST00000606273 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.53■□□□□ 0.88
HLA-F-230ENST00000606273 LTBP4Q8N2S1 1624 aa20.51■□□□□ 0.87
HLA-F-230ENST00000606273 SAMD9Q5K651 1589 aa20.51■□□□□ 0.87
HLA-F-230ENST00000606273 CFAP74Q9C0B2 1584 aa20.51■□□□□ 0.87
HLA-F-230ENST00000606273 OTUD5Q96G74 571 aa20.5■□□□□ 0.87
HLA-F-230ENST00000606273 C9orf84Q5VXU9 1444 aa20.5■□□□□ 0.87
HLA-F-230ENST00000606273 IFNLR1Q8IU57 520 aaPredicted RBP20.49■□□□□ 0.87
HLA-F-230ENST00000606273 IQSEC2Q5JU85 1478 aa20.49■□□□□ 0.87
HLA-F-230ENST00000606273 PLCH2O75038 1416 aa20.47■□□□□ 0.87
HLA-F-230ENST00000606273 GSE1Q14687 1217 aa20.46■□□□□ 0.87
HLA-F-230ENST00000606273 RANGAP1P46060 587 aaPredicted RBP20.45■□□□□ 0.86
HLA-F-230ENST00000606273 EFCAB2Q5VUJ9 269 aa20.44■□□□□ 0.86
HLA-F-230ENST00000606273 UBAP1LF5GYI3 381 aa20.42■□□□□ 0.86
HLA-F-230ENST00000606273 TRIM35Q9UPQ4 493 aa20.42■□□□□ 0.86
HLA-F-230ENST00000606273 AFAP1Q8N556 730 aa20.41■□□□□ 0.86
HLA-F-230ENST00000606273 POTEFA5A3E0 1075 aa20.4■□□□□ 0.86
HLA-F-230ENST00000606273 POTEJP0CG39 1038 aa20.4■□□□□ 0.86
HLA-F-230ENST00000606273 TMEM106CQ9BVX2 250 aa20.4■□□□□ 0.86
HLA-F-230ENST00000606273 TRAPPC8Q9Y2L5 1435 aa20.39■□□□□ 0.85
HLA-F-230ENST00000606273 SPOCK2Q92563 424 aa20.39■□□□□ 0.85
HLA-F-230ENST00000606273 SETD1BQ9UPS6 1966 aaKnown RBP20.39■□□□□ 0.85
HLA-F-230ENST00000606273 PCDHB8Q9UN66 801 aa20.38■□□□□ 0.85
HLA-F-230ENST00000606273 NCOA1Q15788 1441 aa20.37■□□□□ 0.85
HLA-F-230ENST00000606273 ESF1Q9H501 851 aaKnown RBP20.36■□□□□ 0.85
HLA-F-230ENST00000606273 MYT1LQ9UL68 1186 aa20.35■□□□□ 0.85
HLA-F-230ENST00000606273 ZNF335Q9H4Z2 1342 aaPredicted RBP20.34■□□□□ 0.85
HLA-F-230ENST00000606273 COLQQ9Y215 455 aaPredicted RBP20.32■□□□□ 0.84
HLA-F-230ENST00000606273 ZNF518AQ6AHZ1 1483 aa20.31■□□□□ 0.84
HLA-F-230ENST00000606273 NCKAP5LQ9HCH0 1330 aa20.31■□□□□ 0.84
HLA-F-230ENST00000606273 SEC24BO95487 1268 aa20.3■□□□□ 0.84
HLA-F-230ENST00000606273 IER5LQ5T953 404 aa20.3■□□□□ 0.84
HLA-F-230ENST00000606273 C3P01024 1663 aa20.28■□□□□ 0.84
HLA-F-230ENST00000606273 CDK13Q14004 1512 aaKnown RBP20.27■□□□□ 0.84
HLA-F-230ENST00000606273 CHRM1P11229 460 aaPredicted RBP20.27■□□□□ 0.84
HLA-F-230ENST00000606273 HSPA1LP34931 641 aa20.27■□□□□ 0.84
HLA-F-230ENST00000606273 MAMSTRQ6ZN01 415 aa20.26■□□□□ 0.83
HLA-F-230ENST00000606273 CIZ1Q9ULV3 898 aaPredicted RBP20.26■□□□□ 0.83
HLA-F-230ENST00000606273 KDM5CP41229 1560 aa20.25■□□□□ 0.83
HLA-F-230ENST00000606273 REREQ9P2R6 1566 aa20.25■□□□□ 0.83
HLA-F-230ENST00000606273 CAMSAP1Q5T5Y3 1602 aa20.24■□□□□ 0.83
HLA-F-230ENST00000606273 DIP2CQ9Y2E4 1556 aa20.24■□□□□ 0.83
HLA-F-230ENST00000606273 MLH3Q9UHC1 1453 aa20.24■□□□□ 0.83
HLA-F-230ENST00000606273 PKD2Q13563 968 aa20.23■□□□□ 0.83
HLA-F-230ENST00000606273 ZNF467Q7Z7K2 595 aaPredicted RBP20.23■□□□□ 0.83
HLA-F-230ENST00000606273 CDK11AQ9UQ88 783 aaPredicted RBP20.23■□□□□ 0.83
HLA-F-230ENST00000606273 AGLP35573 1532 aa20.22■□□□□ 0.83
HLA-F-230ENST00000606273 CNTLNQ9NXG0 1405 aa20.22■□□□□ 0.83
HLA-F-230ENST00000606273 ATP1B4Q9UN42 357 aaPredicted RBP20.22■□□□□ 0.83
HLA-F-230ENST00000606273 NPATQ14207 1427 aa20.2■□□□□ 0.82
HLA-F-230ENST00000606273 ZMYM3Q14202 1370 aa20.2■□□□□ 0.82
HLA-F-230ENST00000606273 PIP4K2BP78356 416 aa20.19■□□□□ 0.82
HLA-F-230ENST00000606273 ARHGAP5Q13017 1502 aa20.17■□□□□ 0.82
HLA-F-230ENST00000606273 MED1Q15648 1581 aaPredicted RBP20.17■□□□□ 0.82
HLA-F-230ENST00000606273 SCUBE2Q9NQ36 999 aa20.17■□□□□ 0.82
HLA-F-230ENST00000606273 TOM1O60784 492 aa20.16■□□□□ 0.82
HLA-F-230ENST00000606273 MYO5CQ9NQX4 1742 aa20.16■□□□□ 0.82
HLA-F-230ENST00000606273 ABCA6Q8N139 1617 aa20.15■□□□□ 0.82
HLA-F-230ENST00000606273 PLA2R1Q13018 1463 aa20.13■□□□□ 0.81
HLA-F-230ENST00000606273 TCOF1Q13428 1488 aaKnown RBP20.12■□□□□ 0.81
HLA-F-230ENST00000606273 TROQ12816 1431 aaPredicted RBP20.11■□□□□ 0.81
HLA-F-230ENST00000606273 KIF14Q15058 1648 aa20.11■□□□□ 0.81
HLA-F-230ENST00000606273 PLCG2P16885 1265 aa20.1■□□□□ 0.81
HLA-F-230ENST00000606273 IRX5P78411 483 aaPredicted RBP20.1■□□□□ 0.81
HLA-F-230ENST00000606273 PSEN1P49768 467 aa20.06■□□□□ 0.8
HLA-F-230ENST00000606273 FMN1Q68DA7 1419 aa20.06■□□□□ 0.8
HLA-F-230ENST00000606273 CLIP1P30622 1438 aa20.05■□□□□ 0.8
HLA-F-230ENST00000606273 PTPRKQ15262 1439 aa20.04■□□□□ 0.8
HLA-F-230ENST00000606273 EEA1Q15075 1411 aa20.03■□□□□ 0.8
HLA-F-230ENST00000606273 OCEL1Q9H607 264 aa20.02■□□□□ 0.8
HLA-F-230ENST00000606273 MROH2AA6NES4 1674 aa20.02■□□□□ 0.8
HLA-F-230ENST00000606273 ABCC1P33527 1531 aa20.02■□□□□ 0.79
HLA-F-230ENST00000606273 KIDINS220Q9ULH0 1771 aa20.01■□□□□ 0.79
HLA-F-230ENST00000606273 CEP170BQ9Y4F5 1589 aaPredicted RBP20■□□□□ 0.79
HLA-F-230ENST00000606273 PDAP1Q13442 181 aaKnown RBP19.99■□□□□ 0.79
HLA-F-230ENST00000606273 GGT6Q6P531 493 aa19.99■□□□□ 0.79
HLA-F-230ENST00000606273 SPAG9O60271 1321 aaKnown RBP19.99■□□□□ 0.79
HLA-F-230ENST00000606273 CDC42BPBQ9Y5S2 1711 aa19.99■□□□□ 0.79
HLA-F-230ENST00000606273 SHANK2Q9UPX8 1470 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms