RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 SPATA31E1Q6ZUB1 1445 aa21.07■□□□□ 0.96
CCDC12-211ENST00000604367 RGL3Q3MIN7 710 aa21.05■□□□□ 0.96
CCDC12-211ENST00000604367 PLA2R1Q13018 1463 aa21.05■□□□□ 0.96
CCDC12-211ENST00000604367 MAGI2Q86UL8 1455 aa21.05■□□□□ 0.96
CCDC12-211ENST00000604367 CCDC7Q96M83 1385 aa21.04■□□□□ 0.96
CCDC12-211ENST00000604367 UHRF1BP1Q6BDS2 1440 aa21.03■□□□□ 0.96
CCDC12-211ENST00000604367 USP47Q96K76 1375 aa21.03■□□□□ 0.96
CCDC12-211ENST00000604367 ATP7AQ04656 1500 aa21.03■□□□□ 0.96
CCDC12-211ENST00000604367 CCER2I3L3R5 266 aa21.02■□□□□ 0.95
CCDC12-211ENST00000604367 CD109Q6YHK3 1445 aa21■□□□□ 0.95
CCDC12-211ENST00000604367 CARD11Q9BXL7 1154 aa21■□□□□ 0.95
CCDC12-211ENST00000604367 KIF7Q2M1P5 1343 aa21■□□□□ 0.95
CCDC12-211ENST00000604367 INO80Q9ULG1 1556 aaPredicted RBP21■□□□□ 0.95
CCDC12-211ENST00000604367 RALGAPBQ86X10 1494 aa20.98■□□□□ 0.95
CCDC12-211ENST00000604367 KIF3BO15066 747 aa20.98■□□□□ 0.95
CCDC12-211ENST00000604367 CNTLNQ9NXG0 1405 aa20.97■□□□□ 0.95
CCDC12-211ENST00000604367 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
CCDC12-211ENST00000604367 POLR3GLQ9BT43 218 aa20.96■□□□□ 0.95
CCDC12-211ENST00000604367 KDM5CP41229 1560 aa20.95■□□□□ 0.94
CCDC12-211ENST00000604367 ROCK2O75116 1388 aaKnown RBP20.93■□□□□ 0.94
CCDC12-211ENST00000604367 ATP10AO60312 1499 aa20.92■□□□□ 0.94
CCDC12-211ENST00000604367 DHX29Q7Z478 1369 aaKnown RBP20.92■□□□□ 0.94
CCDC12-211ENST00000604367 ZNF518AQ6AHZ1 1483 aa20.92■□□□□ 0.94
CCDC12-211ENST00000604367 A2MP01023 1474 aa20.92■□□□□ 0.94
CCDC12-211ENST00000604367 BCORL1Q5H9F3 1711 aa20.91■□□□□ 0.94
CCDC12-211ENST00000604367 E9PCH4 1651 aa20.91■□□□□ 0.94
CCDC12-211ENST00000604367 POLR1AO95602 1720 aaPredicted RBP20.91■□□□□ 0.94
CCDC12-211ENST00000604367 PRAG1Q86YV5 1406 aa20.91■□□□□ 0.94
CCDC12-211ENST00000604367 DEPDC5O75140 1603 aa20.9■□□□□ 0.94
CCDC12-211ENST00000604367 KANK1Q14678 1352 aa20.9■□□□□ 0.94
CCDC12-211ENST00000604367 KIDINS220Q9ULH0 1771 aa20.9■□□□□ 0.94
CCDC12-211ENST00000604367 RIMBP3CA6NJZ7 1639 aa20.89■□□□□ 0.93
CCDC12-211ENST00000604367 RIMBP3BA6NNM3 1639 aa20.89■□□□□ 0.93
CCDC12-211ENST00000604367 RIMBP3Q9UFD9 1639 aa20.89■□□□□ 0.93
CCDC12-211ENST00000604367 ST20-MTHFSA0A0A6YYL1 179 aa20.89■□□□□ 0.93
CCDC12-211ENST00000604367 NBPF1Q3BBV0 1214 aa20.87■□□□□ 0.93
CCDC12-211ENST00000604367 CFAP74Q9C0B2 1584 aa20.86■□□□□ 0.93
CCDC12-211ENST00000604367 POGZQ7Z3K3 1410 aa20.86■□□□□ 0.93
CCDC12-211ENST00000604367 TRPM1Q7Z4N2 1603 aa20.85■□□□□ 0.93
CCDC12-211ENST00000604367 PRKRIP1Q9H875 184 aaPredicted RBP20.84■□□□□ 0.93
CCDC12-211ENST00000604367 EIF2AK4Q9P2K8 1649 aaKnown RBP20.84■□□□□ 0.93
CCDC12-211ENST00000604367 RAPGEF3O95398 923 aa20.84■□□□□ 0.93
CCDC12-211ENST00000604367 TET3O43151 1660 aa20.84■□□□□ 0.93
CCDC12-211ENST00000604367 CNGB1Q14028 1251 aaPredicted RBP20.83■□□□□ 0.92
CCDC12-211ENST00000604367 MROH1Q8NDA8 1641 aa20.82■□□□□ 0.92
CCDC12-211ENST00000604367 TRPM2O94759 1503 aa20.82■□□□□ 0.92
CCDC12-211ENST00000604367 PRDM15P57071 1507 aaPredicted RBP20.82■□□□□ 0.92
CCDC12-211ENST00000604367 SPHKAPQ2M3C7 1700 aa20.82■□□□□ 0.92
CCDC12-211ENST00000604367 VWDEQ8N2E2 1590 aa20.82■□□□□ 0.92
CCDC12-211ENST00000604367 PTPRTO14522 1441 aa20.8■□□□□ 0.92
CCDC12-211ENST00000604367 CCDC184Q52MB2 194 aa20.8■□□□□ 0.92
CCDC12-211ENST00000604367 MYT1Q01538 1121 aa20.79■□□□□ 0.92
CCDC12-211ENST00000604367 ARID4BQ4LE39 1312 aaPredicted RBP20.79■□□□□ 0.92
CCDC12-211ENST00000604367 MLH3Q9UHC1 1453 aa20.79■□□□□ 0.92
CCDC12-211ENST00000604367 GGT6Q6P531 493 aa20.78■□□□□ 0.92
CCDC12-211ENST00000604367 CLTCL1P53675 1640 aa20.78■□□□□ 0.92
CCDC12-211ENST00000604367 HECW2Q9P2P5 1572 aa20.78■□□□□ 0.92
CCDC12-211ENST00000604367 NEO1Q92859 1461 aa20.77■□□□□ 0.92
CCDC12-211ENST00000604367 GPRASP1Q5JY77 1395 aa20.76■□□□□ 0.91
CCDC12-211ENST00000604367 CEP152O94986 1710 aa20.75■□□□□ 0.91
CCDC12-211ENST00000604367 FRMPD1Q5SYB0 1578 aa20.74■□□□□ 0.91
CCDC12-211ENST00000604367 UGGT1Q9NYU2 1555 aa20.73■□□□□ 0.91
CCDC12-211ENST00000604367 ABCA6Q8N139 1617 aa20.73■□□□□ 0.91
CCDC12-211ENST00000604367 MRS2Q9HD23 443 aa20.73■□□□□ 0.91
CCDC12-211ENST00000604367 EFCAB6Q5THR3 1501 aa20.72■□□□□ 0.91
CCDC12-211ENST00000604367 FAM69CQ0P6D2 419 aa20.72■□□□□ 0.91
CCDC12-211ENST00000604367 MAP3K4Q9Y6R4 1608 aa20.72■□□□□ 0.91
CCDC12-211ENST00000604367 HNRNPUQ00839 825 aaKnown RBP eCLIP20.72■□□□□ 0.91
CCDC12-211ENST00000604367 PPRC1Q5VV67 1664 aaKnown RBP20.71■□□□□ 0.91
CCDC12-211ENST00000604367 RNF17Q9BXT8 1623 aaKnown RBP20.7■□□□□ 0.9
CCDC12-211ENST00000604367 FAM9BQ8IZU0 186 aa20.69■□□□□ 0.9
CCDC12-211ENST00000604367 MADDQ8WXG6 1647 aa20.68■□□□□ 0.9
CCDC12-211ENST00000604367 WASHC2CQ9Y4E1 1318 aa20.68■□□□□ 0.9
CCDC12-211ENST00000604367 LAMC1P11047 1609 aa20.68■□□□□ 0.9
CCDC12-211ENST00000604367 CFAP65Q6ZU64 1925 aaKnown RBP20.68■□□□□ 0.9
CCDC12-211ENST00000604367 LMTK2Q8IWU2 1503 aa20.66■□□□□ 0.9
CCDC12-211ENST00000604367 TESK2Q96S53 571 aa20.66■□□□□ 0.9
CCDC12-211ENST00000604367 GLI2P10070 1586 aa20.65■□□□□ 0.9
CCDC12-211ENST00000604367 CHGAP10645 457 aaKnown RBP20.65■□□□□ 0.9
CCDC12-211ENST00000604367 RICTORQ6R327 1708 aa20.65■□□□□ 0.9
CCDC12-211ENST00000604367 NPATQ14207 1427 aa20.64■□□□□ 0.9
CCDC12-211ENST00000604367 DIP2CQ9Y2E4 1556 aa20.64■□□□□ 0.89
CCDC12-211ENST00000604367 DISP3Q9P2K9 1392 aa20.64■□□□□ 0.89
CCDC12-211ENST00000604367 YEATS2Q9ULM3 1422 aa20.63■□□□□ 0.89
CCDC12-211ENST00000604367 STAC3Q96MF2 364 aa20.63■□□□□ 0.89
CCDC12-211ENST00000604367 KIF1BO60333 1816 aa20.62■□□□□ 0.89
CCDC12-211ENST00000604367 DNAJC5Q9H3Z4 198 aa20.62■□□□□ 0.89
CCDC12-211ENST00000604367 SUPT16HQ9Y5B9 1047 aaKnown RBP20.62■□□□□ 0.89
CCDC12-211ENST00000604367 DIP2BQ9P265 1576 aa20.61■□□□□ 0.89
CCDC12-211ENST00000604367 TSPOAP1O95153 1857 aa20.61■□□□□ 0.89
CCDC12-211ENST00000604367 COL17A1Q9UMD9 1497 aaPredicted RBP20.61■□□□□ 0.89
CCDC12-211ENST00000604367 TMF1P82094 1093 aa20.61■□□□□ 0.89
CCDC12-211ENST00000604367 ABCC3O15438 1527 aa20.6■□□□□ 0.89
CCDC12-211ENST00000604367 ADGRF5Q8IZF2 1346 aa20.6■□□□□ 0.89
CCDC12-211ENST00000604367 CFAP70Q5T0N1 1121 aa20.58■□□□□ 0.89
CCDC12-211ENST00000604367 MROH2AA6NES4 1674 aa20.58■□□□□ 0.88
CCDC12-211ENST00000604367 NEURL4Q96JN8 1562 aa20.57■□□□□ 0.88
CCDC12-211ENST00000604367 SCAF11Q99590 1463 aaKnown RBP20.55■□□□□ 0.88
CCDC12-211ENST00000604367 IQGAP1P46940 1657 aa20.55■□□□□ 0.88
CCDC12-211ENST00000604367 CAMSAP1Q5T5Y3 1602 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms