RNA–Protein interactions for RNA: ENST00000602395.1

COMMD3-BMI1-206, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 2

Gene COMMD3-BMI1, Length 621 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-206ENST00000602395 KCTD12Q96CX2 325 aaKnown RBP14.32□□□□□ -0.12
COMMD3-BMI1-206ENST00000602395 WDR70Q9NW82 654 aa14.32□□□□□ -0.12
COMMD3-BMI1-206ENST00000602395 PDIA6Q15084 440 aa14.31□□□□□ -0.12
COMMD3-BMI1-206ENST00000602395 ARIH1Q9Y4X5 557 aaPredicted RBP14.31□□□□□ -0.12
COMMD3-BMI1-206ENST00000602395 DDX12PQ92771 950 aa14.3□□□□□ -0.12
COMMD3-BMI1-206ENST00000602395 SPDYE16A6NNV3 312 aaPredicted RBP14.29□□□□□ -0.12
COMMD3-BMI1-206ENST00000602395 C6orf132Q5T0Z8 1188 aa14.28□□□□□ -0.12
COMMD3-BMI1-206ENST00000602395 PROX2Q3B8N5 592 aa14.26□□□□□ -0.13
COMMD3-BMI1-206ENST00000602395 MRPL50Q8N5N7 158 aaKnown RBP14.25□□□□□ -0.13
COMMD3-BMI1-206ENST00000602395 RBM33Q96EV2 1170 aaKnown RBP14.24□□□□□ -0.13
COMMD3-BMI1-206ENST00000602395 TSHZ2Q9NRE2 1034 aa14.24□□□□□ -0.13
COMMD3-BMI1-206ENST00000602395 NBPF3Q9H094 633 aa14.23□□□□□ -0.13
COMMD3-BMI1-206ENST00000602395 RABGEF1Q9UJ41 708 aa14.23□□□□□ -0.13
COMMD3-BMI1-206ENST00000602395 GOLGA8CPA6NN73 597 aa14.2□□□□□ -0.14
COMMD3-BMI1-206ENST00000602395 ONECUT3O60422 494 aaPredicted RBP14.19□□□□□ -0.14
COMMD3-BMI1-206ENST00000602395 EN1Q05925 392 aaPredicted RBP14.19□□□□□ -0.14
COMMD3-BMI1-206ENST00000602395 NBR1Q14596 966 aa14.19□□□□□ -0.14
COMMD3-BMI1-206ENST00000602395 THSD4Q6ZMP0 1018 aa14.18□□□□□ -0.14
COMMD3-BMI1-206ENST00000602395 WNT2BQ93097 391 aa14.18□□□□□ -0.14
COMMD3-BMI1-206ENST00000602395 PLA2G2EQ9NZK7 142 aa14.18□□□□□ -0.14
COMMD3-BMI1-206ENST00000602395 PTPN5P54829 565 aa14.17□□□□□ -0.14
COMMD3-BMI1-206ENST00000602395 KIAA1468Q9P260 1216 aa14.17□□□□□ -0.14
COMMD3-BMI1-206ENST00000602395 MAP3K7O43318 606 aa14.14□□□□□ -0.15
COMMD3-BMI1-206ENST00000602395 TSR1Q2NL82 804 aaKnown RBP14.14□□□□□ -0.15
COMMD3-BMI1-206ENST00000602395 TRIM6-TRIM34B2RNG4 842 aa14.13□□□□□ -0.15
COMMD3-BMI1-206ENST00000602395 PRIM1P49642 420 aaKnown RBP14.13□□□□□ -0.15
COMMD3-BMI1-206ENST00000602395 GRXCR2A6NFK2 248 aa14.12□□□□□ -0.15
COMMD3-BMI1-206ENST00000602395 LAPTM4BQ86VI4 370 aa14.12□□□□□ -0.15
COMMD3-BMI1-206ENST00000602395 OSBPP22059 807 aa14.09□□□□□ -0.15
COMMD3-BMI1-206ENST00000602395 ANKK1Q8NFD2 765 aa14.07□□□□□ -0.16
COMMD3-BMI1-206ENST00000602395 ZFRQ96KR1 1074 aaKnown RBP14.06□□□□□ -0.16
COMMD3-BMI1-206ENST00000602395 SEPT9Q9UHD8 586 aaPredicted RBP14.06□□□□□ -0.16
COMMD3-BMI1-206ENST00000602395 TSKSQ9UJT2 592 aa14.06□□□□□ -0.16
COMMD3-BMI1-206ENST00000602395 ARHGEF1Q92888 912 aaKnown RBP14.05□□□□□ -0.16
COMMD3-BMI1-206ENST00000602395 PACS2Q86VP3 889 aa14.03□□□□□ -0.16
COMMD3-BMI1-206ENST00000602395 CERKQ8TCT0 537 aa14.03□□□□□ -0.16
COMMD3-BMI1-206ENST00000602395 SOWAHBA6NEL2 793 aa14.02□□□□□ -0.17
COMMD3-BMI1-206ENST00000602395 PRSS12P56730 875 aa14.02□□□□□ -0.17
COMMD3-BMI1-206ENST00000602395 FAM98CQ17RN3 349 aaKnown RBP14.02□□□□□ -0.17
COMMD3-BMI1-206ENST00000602395 BCAMP50895 628 aa14.01□□□□□ -0.17
COMMD3-BMI1-206ENST00000602395 KCNV2Q8TDN2 545 aa14.01□□□□□ -0.17
COMMD3-BMI1-206ENST00000602395 CDCA7LQ96GN5 454 aa14.01□□□□□ -0.17
COMMD3-BMI1-206ENST00000602395 FAM198AQ9UFP1 575 aa14□□□□□ -0.17
COMMD3-BMI1-206ENST00000602395 CDHR5Q9HBB8 845 aa13.98□□□□□ -0.17
COMMD3-BMI1-206ENST00000602395 IFFO2Q5TF58 517 aa13.96□□□□□ -0.17
COMMD3-BMI1-206ENST00000602395 PLCB2Q00722 1185 aa13.95□□□□□ -0.18
COMMD3-BMI1-206ENST00000602395 MLLT3P42568 568 aaPredicted RBP13.94□□□□□ -0.18
COMMD3-BMI1-206ENST00000602395 NPDC1Q9NQX5 325 aaPredicted RBP13.94□□□□□ -0.18
COMMD3-BMI1-206ENST00000602395 C3orf80F5H4A9 247 aa13.93□□□□□ -0.18
COMMD3-BMI1-206ENST00000602395 WBP1LQ9NX94 342 aa13.93□□□□□ -0.18
COMMD3-BMI1-206ENST00000602395 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.92□□□□□ -0.18
COMMD3-BMI1-206ENST00000602395 SMAPO00193 183 aa13.91□□□□□ -0.18
COMMD3-BMI1-206ENST00000602395 TATDN2Q93075 761 aa13.91□□□□□ -0.18
COMMD3-BMI1-206ENST00000602395 LRCH3Q96II8 777 aa13.91□□□□□ -0.18
COMMD3-BMI1-206ENST00000602395 RBM27Q9P2N5 1060 aaKnown RBP13.91□□□□□ -0.18
COMMD3-BMI1-206ENST00000602395 NYAP1Q6ZVC0 841 aa13.9□□□□□ -0.18
COMMD3-BMI1-206ENST00000602395 TTC13Q8NBP0 860 aa13.89□□□□□ -0.19
COMMD3-BMI1-206ENST00000602395 TSR3Q9UJK0 312 aaKnown RBP13.89□□□□□ -0.19
COMMD3-BMI1-206ENST00000602395 PNMA3Q9UL41 463 aa13.88□□□□□ -0.19
COMMD3-BMI1-206ENST00000602395 NBPF26B4DH59 902 aa13.87□□□□□ -0.19
COMMD3-BMI1-206ENST00000602395 P3H3Q8IVL6 736 aa13.87□□□□□ -0.19
COMMD3-BMI1-206ENST00000602395 HPS5Q9UPZ3 1129 aa13.86□□□□□ -0.19
COMMD3-BMI1-206ENST00000602395 ITGBL1O95965 494 aaPredicted RBP13.85□□□□□ -0.19
COMMD3-BMI1-206ENST00000602395 NUDT18Q6ZVK8 323 aa13.85□□□□□ -0.19
COMMD3-BMI1-206ENST00000602395 SAMD7Q7Z3H4 446 aa13.84□□□□□ -0.19
COMMD3-BMI1-206ENST00000602395 PADI6Q6TGC4 694 aa13.83□□□□□ -0.2
COMMD3-BMI1-206ENST00000602395 A0A0G2JS52 829 aa13.81□□□□□ -0.2
COMMD3-BMI1-206ENST00000602395 PPP4CP60510 307 aa13.8□□□□□ -0.2
COMMD3-BMI1-206ENST00000602395 SEMA3EO15041 775 aa13.79□□□□□ -0.2
COMMD3-BMI1-206ENST00000602395 PTGDRQ13258 359 aa13.77□□□□□ -0.21
COMMD3-BMI1-206ENST00000602395 RGS20O76081 388 aa13.76□□□□□ -0.21
COMMD3-BMI1-206ENST00000602395 EYA1Q99502 592 aa13.75□□□□□ -0.21
COMMD3-BMI1-206ENST00000602395 HDGFP51858 240 aaKnown RBP13.74□□□□□ -0.21
COMMD3-BMI1-206ENST00000602395 KCNC4Q03721 635 aa13.74□□□□□ -0.21
COMMD3-BMI1-206ENST00000602395 NUTM2FA1L443 756 aa13.71□□□□□ -0.21
COMMD3-BMI1-206ENST00000602395 HAP1P54257 671 aaPredicted RBP13.7□□□□□ -0.22
COMMD3-BMI1-206ENST00000602395 SWT1Q5T5J6 900 aaKnown RBP13.69□□□□□ -0.22
COMMD3-BMI1-206ENST00000602395 TESPA1A2RU30 521 aaPredicted RBP13.68□□□□□ -0.22
COMMD3-BMI1-206ENST00000602395 TJAP1Q5JTD0 557 aa13.67□□□□□ -0.22
COMMD3-BMI1-206ENST00000602395 KDM2AQ9Y2K7 1162 aa13.66□□□□□ -0.22
COMMD3-BMI1-206ENST00000602395 RNF40O75150 1001 aa13.65□□□□□ -0.22
COMMD3-BMI1-206ENST00000602395 ADGRG1Q9Y653 693 aa13.65□□□□□ -0.22
COMMD3-BMI1-206ENST00000602395 FCHSD2O94868 740 aa13.64□□□□□ -0.23
COMMD3-BMI1-206ENST00000602395 APLP1P51693 650 aa13.64□□□□□ -0.23
COMMD3-BMI1-206ENST00000602395 SLF2Q8IX21 1173 aa13.64□□□□□ -0.23
COMMD3-BMI1-206ENST00000602395 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
COMMD3-BMI1-206ENST00000602395 NECTIN2Q92692 538 aa13.61□□□□□ -0.23
COMMD3-BMI1-206ENST00000602395 MTRQ99707 1265 aa13.61□□□□□ -0.23
COMMD3-BMI1-206ENST00000602395 FAM161AQ3B820 660 aa13.6□□□□□ -0.23
COMMD3-BMI1-206ENST00000602395 RBM26Q5T8P6 1007 aaKnown RBP13.6□□□□□ -0.23
COMMD3-BMI1-206ENST00000602395 SMYD5Q6GMV2 418 aa13.6□□□□□ -0.23
COMMD3-BMI1-206ENST00000602395 IL21Q9HBE4 155 aa13.6□□□□□ -0.23
COMMD3-BMI1-206ENST00000602395 DNAJB2P25686 324 aa13.59□□□□□ -0.23
COMMD3-BMI1-206ENST00000602395 SLC4A3P48751 1232 aa13.57□□□□□ -0.24
COMMD3-BMI1-206ENST00000602395 TMEM134Q9H6X4 195 aa13.57□□□□□ -0.24
COMMD3-BMI1-206ENST00000602395 RCCD1A6NED2 376 aa13.56□□□□□ -0.24
COMMD3-BMI1-206ENST00000602395 ZNF516Q92618 1163 aa13.56□□□□□ -0.24
COMMD3-BMI1-206ENST00000602395 HIC1Q14526 733 aa13.55□□□□□ -0.24
COMMD3-BMI1-206ENST00000602395 OATP04181 439 aa13.51□□□□□ -0.25
COMMD3-BMI1-206ENST00000602395 PXYLP1Q8TE99 480 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms