RNA–Protein interactions for RNA: ENST00000602253.5

ZNF546-209, Transcript of zinc finger protein 546, humanhuman

TSL 3

Gene ZNF546, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-209ENST00000602253 ZFYVE16Q7Z3T8 1539 aa7.49□□□□□ -1.21
ZNF546-209ENST00000602253 ARID3CA6NKF2 412 aa7.49□□□□□ -1.21
ZNF546-209ENST00000602253 MAP3K13O43283 966 aa7.49□□□□□ -1.21
ZNF546-209ENST00000602253 NCOA1Q15788 1441 aa7.49□□□□□ -1.21
ZNF546-209ENST00000602253 GOLGA3Q08378 1498 aa7.49□□□□□ -1.21
ZNF546-209ENST00000602253 DCAF8Q5TAQ9 597 aa7.48□□□□□ -1.21
ZNF546-209ENST00000602253 RGS17Q9UGC6 210 aaPredicted RBP7.48□□□□□ -1.21
ZNF546-209ENST00000602253 TRAPPC8Q9Y2L5 1435 aa7.48□□□□□ -1.21
ZNF546-209ENST00000602253 ZMYM4Q5VZL5 1548 aa7.47□□□□□ -1.21
ZNF546-209ENST00000602253 PKD2Q13563 968 aa7.47□□□□□ -1.21
ZNF546-209ENST00000602253 TRPC6Q9Y210 931 aa7.47□□□□□ -1.21
ZNF546-209ENST00000602253 ATP10AO60312 1499 aa7.47□□□□□ -1.21
ZNF546-209ENST00000602253 NCKAP5LQ9HCH0 1330 aa7.47□□□□□ -1.21
ZNF546-209ENST00000602253 ESF1Q9H501 851 aaKnown RBP7.46□□□□□ -1.22
ZNF546-209ENST00000602253 RAPGEF2Q9Y4G8 1499 aa7.45□□□□□ -1.22
ZNF546-209ENST00000602253 PYGBP11216 843 aa7.44□□□□□ -1.22
ZNF546-209ENST00000602253 SPOCK2Q92563 424 aa7.44□□□□□ -1.22
ZNF546-209ENST00000602253 HECW1Q76N89 1606 aa7.44□□□□□ -1.22
ZNF546-209ENST00000602253 C9orf84Q5VXU9 1444 aa7.44□□□□□ -1.22
ZNF546-209ENST00000602253 CFAP74Q9C0B2 1584 aa7.43□□□□□ -1.22
ZNF546-209ENST00000602253 CAMSAP1Q5T5Y3 1602 aa7.43□□□□□ -1.22
ZNF546-209ENST00000602253 PLEKHD1A6NEE1 506 aa7.43□□□□□ -1.22
ZNF546-209ENST00000602253 PELP1Q8IZL8 1130 aaKnown RBP7.43□□□□□ -1.22
ZNF546-209ENST00000602253 PCDHB13Q9Y5F0 798 aa7.43□□□□□ -1.22
ZNF546-209ENST00000602253 C3P01024 1663 aa7.42□□□□□ -1.22
ZNF546-209ENST00000602253 POTEAQ6S8J7 498 aa7.42□□□□□ -1.22
ZNF546-209ENST00000602253 PTPRKQ15262 1439 aa7.42□□□□□ -1.22
ZNF546-209ENST00000602253 ATMINO43313 823 aaPredicted RBP7.41□□□□□ -1.22
ZNF546-209ENST00000602253 ASTLQ6HA08 431 aaPredicted RBP7.41□□□□□ -1.22
ZNF546-209ENST00000602253 IFNL1Q8IU54 200 aa7.41□□□□□ -1.22
ZNF546-209ENST00000602253 SCAPERQ9BY12 1400 aa7.41□□□□□ -1.22
ZNF546-209ENST00000602253 SUPT5HO00267 1087 aaKnown RBP7.4□□□□□ -1.22
ZNF546-209ENST00000602253 GSE1Q14687 1217 aa7.4□□□□□ -1.22
ZNF546-209ENST00000602253 BMP2KQ9NSY1 1161 aaPredicted RBP7.4□□□□□ -1.22
ZNF546-209ENST00000602253 ATN1P54259 1190 aaPredicted RBP7.39□□□□□ -1.23
ZNF546-209ENST00000602253 P3H3Q8IVL6 736 aa7.39□□□□□ -1.23
ZNF546-209ENST00000602253 SGIP1Q9BQI5 828 aa7.39□□□□□ -1.23
ZNF546-209ENST00000602253 CIZ1Q9ULV3 898 aaPredicted RBP7.39□□□□□ -1.23
ZNF546-209ENST00000602253 CPS1P31327 1500 aa7.38□□□□□ -1.23
ZNF546-209ENST00000602253 UPF1Q92900 1129 aaKnown RBP eCLIP7.38□□□□□ -1.23
ZNF546-209ENST00000602253 MYT1LQ9UL68 1186 aa7.38□□□□□ -1.23
ZNF546-209ENST00000602253 CTTNBP2Q8WZ74 1663 aa7.38□□□□□ -1.23
ZNF546-209ENST00000602253 PLA2R1Q13018 1463 aa7.37□□□□□ -1.23
ZNF546-209ENST00000602253 NPATQ14207 1427 aa7.37□□□□□ -1.23
ZNF546-209ENST00000602253 CNTLNQ9NXG0 1405 aa7.37□□□□□ -1.23
ZNF546-209ENST00000602253 EFCAB2Q5VUJ9 269 aa7.37□□□□□ -1.23
ZNF546-209ENST00000602253 PCDHB8Q9UN66 801 aa7.37□□□□□ -1.23
ZNF546-209ENST00000602253 TCOF1Q13428 1488 aaKnown RBP7.36□□□□□ -1.23
ZNF546-209ENST00000602253 TTLL13PA6NNM8 815 aa7.36□□□□□ -1.23
ZNF546-209ENST00000602253 TIE1P35590 1138 aa7.36□□□□□ -1.23
ZNF546-209ENST00000602253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.36□□□□□ -1.23
ZNF546-209ENST00000602253 SHANK2Q9UPX8 1470 aa7.36□□□□□ -1.23
ZNF546-209ENST00000602253 SUPT6HQ7KZ85 1726 aaKnown RBP7.35□□□□□ -1.23
ZNF546-209ENST00000602253 AGLP35573 1532 aa7.35□□□□□ -1.23
ZNF546-209ENST00000602253 PLCH2O75038 1416 aa7.35□□□□□ -1.23
ZNF546-209ENST00000602253 ZMYM3Q14202 1370 aa7.34□□□□□ -1.23
ZNF546-209ENST00000602253 AFAP1Q8N556 730 aa7.34□□□□□ -1.23
ZNF546-209ENST00000602253 RAPGEF6Q8TEU7 1601 aa7.34□□□□□ -1.24
ZNF546-209ENST00000602253 METRNQ9UJH8 293 aa7.33□□□□□ -1.24
ZNF546-209ENST00000602253 ALKQ9UM73 1620 aa7.33□□□□□ -1.24
ZNF546-209ENST00000602253 REREQ9P2R6 1566 aa7.33□□□□□ -1.24
ZNF546-209ENST00000602253 SRCAPQ6ZRS2 3230 aa7.33□□□□□ -1.24
ZNF546-209ENST00000602253 ZNF518AQ6AHZ1 1483 aa7.32□□□□□ -1.24
ZNF546-209ENST00000602253 POTEB2H3BUK9 544 aa7.32□□□□□ -1.24
ZNF546-209ENST00000602253 CHRM1P11229 460 aaPredicted RBP7.32□□□□□ -1.24
ZNF546-209ENST00000602253 TMEM106CQ9BVX2 250 aa7.32□□□□□ -1.24
ZNF546-209ENST00000602253 SLC39A7Q92504 469 aa7.31□□□□□ -1.24
ZNF546-209ENST00000602253 TRIM35Q9UPQ4 493 aa7.31□□□□□ -1.24
ZNF546-209ENST00000602253 MROH2AA6NES4 1674 aa7.31□□□□□ -1.24
ZNF546-209ENST00000602253 NUP153P49790 1475 aaKnown RBP7.3□□□□□ -1.24
ZNF546-209ENST00000602253 ANKLE2Q86XL3 938 aa7.3□□□□□ -1.24
ZNF546-209ENST00000602253 ZNF142P52746 1687 aaPredicted RBP7.3□□□□□ -1.24
ZNF546-209ENST00000602253 SETD1AO15047 1707 aaKnown RBP7.3□□□□□ -1.24
ZNF546-209ENST00000602253 POTEFA5A3E0 1075 aa7.29□□□□□ -1.24
ZNF546-209ENST00000602253 C7P10643 843 aa7.29□□□□□ -1.24
ZNF546-209ENST00000602253 ZNF467Q7Z7K2 595 aaPredicted RBP7.29□□□□□ -1.24
ZNF546-209ENST00000602253 MLH3Q9UHC1 1453 aa7.29□□□□□ -1.24
ZNF546-209ENST00000602253 DIP2CQ9Y2E4 1556 aa7.29□□□□□ -1.24
ZNF546-209ENST00000602253 CEP170BQ9Y4F5 1589 aaPredicted RBP7.29□□□□□ -1.24
ZNF546-209ENST00000602253 KDM5CP41229 1560 aa7.28□□□□□ -1.24
ZNF546-209ENST00000602253 MYO3AQ8NEV4 1616 aa7.27□□□□□ -1.25
ZNF546-209ENST00000602253 THEMISQ8N1K5 641 aaPredicted RBP7.26□□□□□ -1.25
ZNF546-209ENST00000602253 COLQQ9Y215 455 aaPredicted RBP7.26□□□□□ -1.25
ZNF546-209ENST00000602253 FAM135BQ49AJ0 1406 aa7.26□□□□□ -1.25
ZNF546-209ENST00000602253 VWDEQ8N2E2 1590 aa7.25□□□□□ -1.25
ZNF546-209ENST00000602253 A2ML1A8K2U0 1454 aa7.25□□□□□ -1.25
ZNF546-209ENST00000602253 POLR1AO95602 1720 aaPredicted RBP7.25□□□□□ -1.25
ZNF546-209ENST00000602253 POTEJP0CG39 1038 aa7.25□□□□□ -1.25
ZNF546-209ENST00000602253 PSEN1P49768 467 aa7.25□□□□□ -1.25
ZNF546-209ENST00000602253 ZNF772Q68DY9 489 aaPredicted RBP7.25□□□□□ -1.25
ZNF546-209ENST00000602253 TRIM52Q96A61 297 aa7.25□□□□□ -1.25
ZNF546-209ENST00000602253 DNMT1P26358 1616 aaKnown RBP7.25□□□□□ -1.25
ZNF546-209ENST00000602253 ABCA6Q8N139 1617 aa7.25□□□□□ -1.25
ZNF546-209ENST00000602253 LRRC7Q96NW7 1537 aa7.25□□□□□ -1.25
ZNF546-209ENST00000602253 MYO5CQ9NQX4 1742 aa7.24□□□□□ -1.25
ZNF546-209ENST00000602253 RXRBP28702 533 aa7.24□□□□□ -1.25
ZNF546-209ENST00000602253 RNF25Q96BH1 459 aaPredicted RBP7.24□□□□□ -1.25
ZNF546-209ENST00000602253 PDAP1Q13442 181 aaKnown RBP7.23□□□□□ -1.25
ZNF546-209ENST00000602253 CDK11AQ9UQ88 783 aaPredicted RBP7.23□□□□□ -1.25
ZNF546-209ENST00000602253 SAMD9Q5K651 1589 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms