RNA–Protein interactions for RNA: ENST00000602015.5

FARP1-238, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-238	ENST00000602015	WNT2B	Q93097	391 aa		12.28	□□□□□ -0.44
FARP1-238	ENST00000602015	RABGEF1	Q9UJ41	708 aa		12.28	□□□□□ -0.44
FARP1-238	ENST00000602015	PTPN5	P54829	565 aa		12.26	□□□□□ -0.45
FARP1-238	ENST00000602015	THSD4	Q6ZMP0	1018 aa		12.26	□□□□□ -0.45
FARP1-238	ENST00000602015	ONECUT3	O60422	494 aa	Predicted RBP	12.25	□□□□□ -0.45
FARP1-238	ENST00000602015	RTN4	Q9NQC3	1192 aa	Known RBP	12.25	□□□□□ -0.45
FARP1-238	ENST00000602015	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.24	□□□□□ -0.45
FARP1-238	ENST00000602015	C6orf132	Q5T0Z8	1188 aa		12.23	□□□□□ -0.45
FARP1-238	ENST00000602015	COL9A1	P20849	921 aa		12.22	□□□□□ -0.45
FARP1-238	ENST00000602015	LAPTM4B	Q86VI4	370 aa		12.22	□□□□□ -0.45
FARP1-238	ENST00000602015	WDR70	Q9NW82	654 aa		12.22	□□□□□ -0.45
FARP1-238	ENST00000602015	PDIA6	Q15084	440 aa		12.21	□□□□□ -0.45
FARP1-238	ENST00000602015	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.21	□□□□□ -0.45
FARP1-238	ENST00000602015	E2F4	Q16254	413 aa		12.2	□□□□□ -0.46
FARP1-238	ENST00000602015	PROX2	Q3B8N5	592 aa		12.2	□□□□□ -0.46
FARP1-238	ENST00000602015	ANKK1	Q8NFD2	765 aa		12.2	□□□□□ -0.46
FARP1-238	ENST00000602015	CFAP44	Q96MT7	982 aa		12.2	□□□□□ -0.46
FARP1-238	ENST00000602015	DDX12P	Q92771	950 aa		12.19	□□□□□ -0.46
FARP1-238	ENST00000602015	IFFO2	Q5TF58	517 aa		12.18	□□□□□ -0.46
FARP1-238	ENST00000602015	KIAA1468	Q9P260	1216 aa		12.17	□□□□□ -0.46
FARP1-238	ENST00000602015	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.17	□□□□□ -0.46
FARP1-238	ENST00000602015	RBM33	Q96EV2	1170 aa	Known RBP	12.16	□□□□□ -0.46
FARP1-238	ENST00000602015	TRIM6-TRIM34	B2RNG4	842 aa		12.14	□□□□□ -0.47
FARP1-238	ENST00000602015	EN1	Q05925	392 aa	Predicted RBP	12.14	□□□□□ -0.47
FARP1-238	ENST00000602015	NBR1	Q14596	966 aa		12.14	□□□□□ -0.47
FARP1-238	ENST00000602015	NYAP1	Q6ZVC0	841 aa		12.13	□□□□□ -0.47
FARP1-238	ENST00000602015	MAP3K7	O43318	606 aa		12.12	□□□□□ -0.47
FARP1-238	ENST00000602015	ZFR	Q96KR1	1074 aa	Known RBP	12.11	□□□□□ -0.47
FARP1-238	ENST00000602015	SOWAHB	A6NEL2	793 aa		12.1	□□□□□ -0.47
FARP1-238	ENST00000602015	RGS20	O76081	388 aa		12.1	□□□□□ -0.47
FARP1-238	ENST00000602015	PACS2	Q86VP3	889 aa		12.1	□□□□□ -0.47
FARP1-238	ENST00000602015	CERK	Q8TCT0	537 aa		12.1	□□□□□ -0.47
FARP1-238	ENST00000602015	FAM98C	Q17RN3	349 aa	Known RBP	12.09	□□□□□ -0.47
FARP1-238	ENST00000602015	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.05	□□□□□ -0.48
FARP1-238	ENST00000602015	BCAM	P50895	628 aa		12.04	□□□□□ -0.48
FARP1-238	ENST00000602015	TSR1	Q2NL82	804 aa	Known RBP	12.04	□□□□□ -0.48
FARP1-238	ENST00000602015	GRXCR2	A6NFK2	248 aa		12.03	□□□□□ -0.48
FARP1-238	ENST00000602015	LRCH3	Q96II8	777 aa		12.02	□□□□□ -0.49
FARP1-238	ENST00000602015	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.02	□□□□□ -0.49
FARP1-238	ENST00000602015		A0A0G2JS52	829 aa		12.01	□□□□□ -0.49
FARP1-238	ENST00000602015	ITGBL1	O95965	494 aa	Predicted RBP	12.01	□□□□□ -0.49
FARP1-238	ENST00000602015	PRSS12	P56730	875 aa		12.01	□□□□□ -0.49
FARP1-238	ENST00000602015	CDCA7L	Q96GN5	454 aa		12	□□□□□ -0.49
FARP1-238	ENST00000602015	TSR3	Q9UJK0	312 aa	Known RBP	12	□□□□□ -0.49
FARP1-238	ENST00000602015	TSKS	Q9UJT2	592 aa		12	□□□□□ -0.49
FARP1-238	ENST00000602015	WBP1L	Q9NX94	342 aa		11.98	□□□□□ -0.49
FARP1-238	ENST00000602015	NBPF26	B4DH59	902 aa		11.96	□□□□□ -0.49
FARP1-238	ENST00000602015	OSBP	P22059	807 aa		11.96	□□□□□ -0.49
FARP1-238	ENST00000602015	RBM27	Q9P2N5	1060 aa	Known RBP	11.96	□□□□□ -0.49
FARP1-238	ENST00000602015	HPS5	Q9UPZ3	1129 aa		11.95	□□□□□ -0.5
FARP1-238	ENST00000602015	KCNC4	Q03721	635 aa		11.94	□□□□□ -0.5
FARP1-238	ENST00000602015	HDGF	P51858	240 aa	Known RBP	11.93	□□□□□ -0.5
FARP1-238	ENST00000602015	ARHGEF1	Q92888	912 aa	Known RBP	11.93	□□□□□ -0.5
FARP1-238	ENST00000602015	PRIM1	P49642	420 aa	Known RBP	11.92	□□□□□ -0.5
FARP1-238	ENST00000602015	PPP4C	P60510	307 aa		11.92	□□□□□ -0.5
FARP1-238	ENST00000602015	TATDN2	Q93075	761 aa		11.92	□□□□□ -0.5
FARP1-238	ENST00000602015	PNMA3	Q9UL41	463 aa		11.9	□□□□□ -0.5
FARP1-238	ENST00000602015	FAM198A	Q9UFP1	575 aa		11.88	□□□□□ -0.51
FARP1-238	ENST00000602015	SMAP	O00193	183 aa		11.87	□□□□□ -0.51
FARP1-238	ENST00000602015	SAMD7	Q7Z3H4	446 aa		11.87	□□□□□ -0.51
FARP1-238	ENST00000602015	NECTIN2	Q92692	538 aa		11.87	□□□□□ -0.51
FARP1-238	ENST00000602015	TSHZ2	Q9NRE2	1034 aa		11.87	□□□□□ -0.51
FARP1-238	ENST00000602015	CDHR5	Q9HBB8	845 aa		11.86	□□□□□ -0.51
FARP1-238	ENST00000602015	NUDT18	Q6ZVK8	323 aa		11.85	□□□□□ -0.51
FARP1-238	ENST00000602015	IRX2	Q9BZI1	471 aa	Predicted RBP	11.84	□□□□□ -0.51
FARP1-238	ENST00000602015	TTC13	Q8NBP0	860 aa		11.83	□□□□□ -0.52
FARP1-238	ENST00000602015	SLC4A3	P48751	1232 aa		11.82	□□□□□ -0.52
FARP1-238	ENST00000602015	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.82	□□□□□ -0.52
FARP1-238	ENST00000602015	P3H3	Q8IVL6	736 aa		11.81	□□□□□ -0.52
FARP1-238	ENST00000602015	KCNV2	Q8TDN2	545 aa		11.8	□□□□□ -0.52
FARP1-238	ENST00000602015	PADI6	Q6TGC4	694 aa		11.79	□□□□□ -0.52
FARP1-238	ENST00000602015	C3orf80	F5H4A9	247 aa		11.78	□□□□□ -0.52
FARP1-238	ENST00000602015	SLF2	Q8IX21	1173 aa		11.78	□□□□□ -0.52
FARP1-238	ENST00000602015	RNF40	O75150	1001 aa		11.77	□□□□□ -0.53
FARP1-238	ENST00000602015	TJAP1	Q5JTD0	557 aa		11.76	□□□□□ -0.53
FARP1-238	ENST00000602015	IL21	Q9HBE4	155 aa		11.76	□□□□□ -0.53
FARP1-238	ENST00000602015	MLLT3	P42568	568 aa	Predicted RBP	11.75	□□□□□ -0.53
FARP1-238	ENST00000602015	MTR	Q99707	1265 aa		11.73	□□□□□ -0.53
FARP1-238	ENST00000602015	SWT1	Q5T5J6	900 aa	Known RBP	11.72	□□□□□ -0.53
FARP1-238	ENST00000602015	EYA1	Q99502	592 aa		11.72	□□□□□ -0.53
FARP1-238	ENST00000602015	PRR14	Q9BWN1	585 aa		11.72	□□□□□ -0.53
FARP1-238	ENST00000602015	PTGDR	Q13258	359 aa		11.71	□□□□□ -0.53
FARP1-238	ENST00000602015	APLP1	P51693	650 aa		11.69	□□□□□ -0.54
FARP1-238	ENST00000602015	RBM46	Q8TBY0	533 aa	Known RBP	11.69	□□□□□ -0.54
FARP1-238	ENST00000602015	NUTM2F	A1L443	756 aa		11.67	□□□□□ -0.54
FARP1-238	ENST00000602015	DNAJB2	P25686	324 aa		11.67	□□□□□ -0.54
FARP1-238	ENST00000602015	LAPTM4A	Q15012	233 aa		11.66	□□□□□ -0.54
FARP1-238	ENST00000602015	FCHSD2	O94868	740 aa		11.64	□□□□□ -0.55
FARP1-238	ENST00000602015	GGCX	P38435	758 aa		11.64	□□□□□ -0.55
FARP1-238	ENST00000602015	PPP1R18	Q6NYC8	613 aa		11.63	□□□□□ -0.55
FARP1-238	ENST00000602015	PLCB2	Q00722	1185 aa		11.62	□□□□□ -0.55
FARP1-238	ENST00000602015	SMYD5	Q6GMV2	418 aa		11.62	□□□□□ -0.55
FARP1-238	ENST00000602015	ZNF516	Q92618	1163 aa		11.62	□□□□□ -0.55
FARP1-238	ENST00000602015	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.62	□□□□□ -0.55
FARP1-238	ENST00000602015	ADGRG1	Q9Y653	693 aa		11.62	□□□□□ -0.55
FARP1-238	ENST00000602015	TMEM134	Q9H6X4	195 aa		11.61	□□□□□ -0.55
FARP1-238	ENST00000602015	SEMA3E	O15041	775 aa		11.6	□□□□□ -0.55
FARP1-238	ENST00000602015		V9GY48	417 aa	Predicted RBP	11.6	□□□□□ -0.55
FARP1-238	ENST00000602015	COPS2	P61201	443 aa		11.59	□□□□□ -0.55
FARP1-238	ENST00000602015	TMUB1	Q9BVT8	246 aa		11.59	□□□□□ -0.55

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