RNA–Protein interactions for RNA: ENST00000601453.2

ATM-225, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-225ENST00000601453 COL9A1P20849 921 aa11.7□□□□□ -0.54
ATM-225ENST00000601453 EPAS1Q99814 870 aa11.7□□□□□ -0.54
ATM-225ENST00000601453 PROX2Q3B8N5 592 aa11.68□□□□□ -0.54
ATM-225ENST00000601453 SPRYD3Q8NCJ5 442 aa11.68□□□□□ -0.54
ATM-225ENST00000601453 AMER1Q5JTC6 1135 aaPredicted RBP11.67□□□□□ -0.54
ATM-225ENST00000601453 C6orf132Q5T0Z8 1188 aa11.66□□□□□ -0.54
ATM-225ENST00000601453 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.54
ATM-225ENST00000601453 ONECUT3O60422 494 aaPredicted RBP11.64□□□□□ -0.55
ATM-225ENST00000601453 IFFO2Q5TF58 517 aa11.64□□□□□ -0.55
ATM-225ENST00000601453 LAPTM4BQ86VI4 370 aa11.63□□□□□ -0.55
ATM-225ENST00000601453 PDIA6Q15084 440 aa11.61□□□□□ -0.55
ATM-225ENST00000601453 DDX12PQ92771 950 aa11.61□□□□□ -0.55
ATM-225ENST00000601453 KIAA1468Q9P260 1216 aa11.61□□□□□ -0.55
ATM-225ENST00000601453 ANKK1Q8NFD2 765 aa11.6□□□□□ -0.55
ATM-225ENST00000601453 RBM33Q96EV2 1170 aaKnown RBP11.59□□□□□ -0.55
ATM-225ENST00000601453 SPDYE16A6NNV3 312 aaPredicted RBP11.58□□□□□ -0.56
ATM-225ENST00000601453 TRIM6-TRIM34B2RNG4 842 aa11.57□□□□□ -0.56
ATM-225ENST00000601453 ZFRQ96KR1 1074 aaKnown RBP11.56□□□□□ -0.56
ATM-225ENST00000601453 RTN4Q9NQC3 1192 aaKnown RBP11.56□□□□□ -0.56
ATM-225ENST00000601453 SOWAHBA6NEL2 793 aa11.55□□□□□ -0.56
ATM-225ENST00000601453 EN1Q05925 392 aaPredicted RBP11.55□□□□□ -0.56
ATM-225ENST00000601453 NBR1Q14596 966 aa11.55□□□□□ -0.56
ATM-225ENST00000601453 E2F4Q16254 413 aa11.55□□□□□ -0.56
ATM-225ENST00000601453 BCAMP50895 628 aa11.54□□□□□ -0.56
ATM-225ENST00000601453 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
ATM-225ENST00000601453 ARIH1Q9Y4X5 557 aaPredicted RBP11.54□□□□□ -0.56
ATM-225ENST00000601453 RGS20O76081 388 aa11.53□□□□□ -0.56
ATM-225ENST00000601453 CFAP44Q96MT7 982 aa11.53□□□□□ -0.56
ATM-225ENST00000601453 SEPT9Q9UHD8 586 aaPredicted RBP11.53□□□□□ -0.56
ATM-225ENST00000601453 MAP3K7O43318 606 aa11.52□□□□□ -0.57
ATM-225ENST00000601453 A0A0G2JS52 829 aa11.51□□□□□ -0.57
ATM-225ENST00000601453 FAM98CQ17RN3 349 aaKnown RBP11.51□□□□□ -0.57
ATM-225ENST00000601453 TSR1Q2NL82 804 aaKnown RBP11.51□□□□□ -0.57
ATM-225ENST00000601453 NYAP1Q6ZVC0 841 aa11.51□□□□□ -0.57
ATM-225ENST00000601453 WDR70Q9NW82 654 aa11.5□□□□□ -0.57
ATM-225ENST00000601453 ITGBL1O95965 494 aaPredicted RBP11.48□□□□□ -0.57
ATM-225ENST00000601453 PACS2Q86VP3 889 aa11.48□□□□□ -0.57
ATM-225ENST00000601453 WBP1LQ9NX94 342 aa11.47□□□□□ -0.57
ATM-225ENST00000601453 TSKSQ9UJT2 592 aa11.47□□□□□ -0.57
ATM-225ENST00000601453 CERKQ8TCT0 537 aa11.44□□□□□ -0.58
ATM-225ENST00000601453 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.44□□□□□ -0.58
ATM-225ENST00000601453 GRXCR2A6NFK2 248 aa11.43□□□□□ -0.58
ATM-225ENST00000601453 PRIM1P49642 420 aaKnown RBP11.43□□□□□ -0.58
ATM-225ENST00000601453 CDCA7LQ96GN5 454 aa11.43□□□□□ -0.58
ATM-225ENST00000601453 LRCH3Q96II8 777 aa11.43□□□□□ -0.58
ATM-225ENST00000601453 TSR3Q9UJK0 312 aaKnown RBP11.43□□□□□ -0.58
ATM-225ENST00000601453 PRSS12P56730 875 aa11.42□□□□□ -0.58
ATM-225ENST00000601453 HPS5Q9UPZ3 1129 aa11.4□□□□□ -0.58
ATM-225ENST00000601453 OSBPP22059 807 aa11.39□□□□□ -0.59
ATM-225ENST00000601453 FAM198AQ9UFP1 575 aa11.39□□□□□ -0.59
ATM-225ENST00000601453 KCNC4Q03721 635 aa11.38□□□□□ -0.59
ATM-225ENST00000601453 SMAPO00193 183 aa11.36□□□□□ -0.59
ATM-225ENST00000601453 NBPF26B4DH59 902 aa11.35□□□□□ -0.59
ATM-225ENST00000601453 TATDN2Q93075 761 aa11.35□□□□□ -0.59
ATM-225ENST00000601453 CDHR5Q9HBB8 845 aa11.35□□□□□ -0.59
ATM-225ENST00000601453 RBM27Q9P2N5 1060 aaKnown RBP11.35□□□□□ -0.59
ATM-225ENST00000601453 C3orf80F5H4A9 247 aa11.34□□□□□ -0.59
ATM-225ENST00000601453 PPP4CP60510 307 aa11.34□□□□□ -0.59
ATM-225ENST00000601453 SAMD7Q7Z3H4 446 aa11.34□□□□□ -0.59
ATM-225ENST00000601453 IRX2Q9BZI1 471 aaPredicted RBP11.34□□□□□ -0.59
ATM-225ENST00000601453 PNMA3Q9UL41 463 aa11.32□□□□□ -0.6
ATM-225ENST00000601453 NUDT18Q6ZVK8 323 aa11.29□□□□□ -0.6
ATM-225ENST00000601453 TTC13Q8NBP0 860 aa11.29□□□□□ -0.6
ATM-225ENST00000601453 NPDC1Q9NQX5 325 aaPredicted RBP11.28□□□□□ -0.6
ATM-225ENST00000601453 ARHGEF1Q92888 912 aaKnown RBP11.27□□□□□ -0.61
ATM-225ENST00000601453 HDGFP51858 240 aaKnown RBP11.26□□□□□ -0.61
ATM-225ENST00000601453 TJAP1Q5JTD0 557 aa11.26□□□□□ -0.61
ATM-225ENST00000601453 TSHZ2Q9NRE2 1034 aa11.26□□□□□ -0.61
ATM-225ENST00000601453 PADI6Q6TGC4 694 aa11.24□□□□□ -0.61
ATM-225ENST00000601453 KCNV2Q8TDN2 545 aa11.22□□□□□ -0.61
ATM-225ENST00000601453 MTRQ99707 1265 aa11.21□□□□□ -0.61
ATM-225ENST00000601453 MLLT3P42568 568 aaPredicted RBP11.2□□□□□ -0.62
ATM-225ENST00000601453 IL21Q9HBE4 155 aa11.2□□□□□ -0.62
ATM-225ENST00000601453 RNF40O75150 1001 aa11.19□□□□□ -0.62
ATM-225ENST00000601453 NECTIN2Q92692 538 aa11.19□□□□□ -0.62
ATM-225ENST00000601453 SWT1Q5T5J6 900 aaKnown RBP11.18□□□□□ -0.62
ATM-225ENST00000601453 EYA1Q99502 592 aa11.18□□□□□ -0.62
ATM-225ENST00000601453 APLP1P51693 650 aa11.17□□□□□ -0.62
ATM-225ENST00000601453 SLF2Q8IX21 1173 aa11.17□□□□□ -0.62
ATM-225ENST00000601453 PTGDRQ13258 359 aa11.14□□□□□ -0.63
ATM-225ENST00000601453 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
ATM-225ENST00000601453 SLC4A3P48751 1232 aa11.12□□□□□ -0.63
ATM-225ENST00000601453 PPP1R18Q6NYC8 613 aa11.12□□□□□ -0.63
ATM-225ENST00000601453 P3H3Q8IVL6 736 aa11.1□□□□□ -0.63
ATM-225ENST00000601453 LAPTM4AQ15012 233 aa11.09□□□□□ -0.63
ATM-225ENST00000601453 Q6ZNB5 142 aa11.09□□□□□ -0.63
ATM-225ENST00000601453 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.09□□□□□ -0.63
ATM-225ENST00000601453 PRR14Q9BWN1 585 aa11.08□□□□□ -0.64
ATM-225ENST00000601453 PRKD2Q9BZL6 878 aa11.08□□□□□ -0.64
ATM-225ENST00000601453 DNAJB2P25686 324 aa11.07□□□□□ -0.64
ATM-225ENST00000601453 RBM46Q8TBY0 533 aaKnown RBP11.07□□□□□ -0.64
ATM-225ENST00000601453 ADGRG1Q9Y653 693 aa11.07□□□□□ -0.64
ATM-225ENST00000601453 COPS2P61201 443 aa11.06□□□□□ -0.64
ATM-225ENST00000601453 NKX2-3Q8TAU0 364 aa11.06□□□□□ -0.64
ATM-225ENST00000601453 V9GY48 417 aaPredicted RBP11.06□□□□□ -0.64
ATM-225ENST00000601453 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
ATM-225ENST00000601453 TMEM134Q9H6X4 195 aa11.05□□□□□ -0.64
ATM-225ENST00000601453 GFRA3O60609 400 aa11.03□□□□□ -0.64
ATM-225ENST00000601453 ZPR1O75312 459 aa11.03□□□□□ -0.64
ATM-225ENST00000601453 SEMA3EO15041 775 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms