RNA–Protein interactions for RNA: ENST00000599687.1

SNRNP70-208, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-208ENST00000599687 NUBP1P53384 320 aa14.4□□□□□ -0.1
SNRNP70-208ENST00000599687 MMRN1Q13201 1228 aa14.4□□□□□ -0.1
SNRNP70-208ENST00000599687 SAMD9Q5K651 1589 aa14.39□□□□□ -0.11
SNRNP70-208ENST00000599687 OCEL1Q9H607 264 aa14.39□□□□□ -0.11
SNRNP70-208ENST00000599687 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.39□□□□□ -0.11
SNRNP70-208ENST00000599687 GLI2P10070 1586 aa14.39□□□□□ -0.11
SNRNP70-208ENST00000599687 TSPOAP1O95153 1857 aa14.38□□□□□ -0.11
SNRNP70-208ENST00000599687 IRX5P78411 483 aaPredicted RBP14.38□□□□□ -0.11
SNRNP70-208ENST00000599687 SPNS2Q8IVW8 549 aa14.37□□□□□ -0.11
SNRNP70-208ENST00000599687 TULP1O00294 542 aaPredicted RBP14.36□□□□□ -0.11
SNRNP70-208ENST00000599687 EPRSP07814 1512 aaKnown RBP14.36□□□□□ -0.11
SNRNP70-208ENST00000599687 RANGAP1P46060 587 aaPredicted RBP14.35□□□□□ -0.11
SNRNP70-208ENST00000599687 HS6ST3Q8IZP7 471 aa14.33□□□□□ -0.12
SNRNP70-208ENST00000599687 WDR7Q9Y4E6 1490 aa14.32□□□□□ -0.12
SNRNP70-208ENST00000599687 PPRC1Q5VV67 1664 aaKnown RBP14.32□□□□□ -0.12
SNRNP70-208ENST00000599687 MAP3K4Q9Y6R4 1608 aa14.31□□□□□ -0.12
SNRNP70-208ENST00000599687 UBTFP17480 764 aaKnown RBP14.31□□□□□ -0.12
SNRNP70-208ENST00000599687 ATP10BO94823 1461 aa14.31□□□□□ -0.12
SNRNP70-208ENST00000599687 KDM6BO15054 1643 aa14.3□□□□□ -0.12
SNRNP70-208ENST00000599687 FHOD3Q2V2M9 1422 aa14.3□□□□□ -0.12
SNRNP70-208ENST00000599687 RAPGEF6Q8TEU7 1601 aa14.3□□□□□ -0.12
SNRNP70-208ENST00000599687 ARID3CA6NKF2 412 aa14.29□□□□□ -0.12
SNRNP70-208ENST00000599687 KCNH8Q96L42 1107 aa14.29□□□□□ -0.12
SNRNP70-208ENST00000599687 EFCAB5A4FU69 1503 aa14.28□□□□□ -0.12
SNRNP70-208ENST00000599687 MARVELD3Q96A59 401 aa14.27□□□□□ -0.13
SNRNP70-208ENST00000599687 GTF3C3Q9Y5Q9 886 aa14.26□□□□□ -0.13
SNRNP70-208ENST00000599687 NUP153P49790 1475 aaKnown RBP14.25□□□□□ -0.13
SNRNP70-208ENST00000599687 TEX14Q8IWB6 1497 aa14.24□□□□□ -0.13
SNRNP70-208ENST00000599687 CFAP43Q8NDM7 1665 aa14.23□□□□□ -0.13
SNRNP70-208ENST00000599687 DCAF8Q5TAQ9 597 aa14.23□□□□□ -0.13
SNRNP70-208ENST00000599687 C3orf67Q6ZVT6 689 aa14.23□□□□□ -0.13
SNRNP70-208ENST00000599687 RNF25Q96BH1 459 aaPredicted RBP14.23□□□□□ -0.13
SNRNP70-208ENST00000599687 CD109Q6YHK3 1445 aa14.23□□□□□ -0.13
SNRNP70-208ENST00000599687 COL17A1Q9UMD9 1497 aaPredicted RBP14.22□□□□□ -0.13
SNRNP70-208ENST00000599687 MAGI3Q5TCQ9 1506 aa14.21□□□□□ -0.13
SNRNP70-208ENST00000599687 ARHGAP35Q9NRY4 1499 aa14.21□□□□□ -0.13
SNRNP70-208ENST00000599687 EMP3P54852 163 aa14.2□□□□□ -0.14
SNRNP70-208ENST00000599687 NKX1-1Q15270 411 aaPredicted RBP14.2□□□□□ -0.14
SNRNP70-208ENST00000599687 PYGBP11216 843 aa14.19□□□□□ -0.14
SNRNP70-208ENST00000599687 GOLGA2Q08379 1002 aa14.19□□□□□ -0.14
SNRNP70-208ENST00000599687 ABCA9Q8IUA7 1624 aa14.18□□□□□ -0.14
SNRNP70-208ENST00000599687 PLEKHD1A6NEE1 506 aa14.17□□□□□ -0.14
SNRNP70-208ENST00000599687 L3MBTL3Q96JM7 780 aaPredicted RBP14.16□□□□□ -0.14
SNRNP70-208ENST00000599687 FMN1Q68DA7 1419 aa14.15□□□□□ -0.14
SNRNP70-208ENST00000599687 GTPBP6O43824 516 aaPredicted RBP14.13□□□□□ -0.15
SNRNP70-208ENST00000599687 PCDHB8Q9UN66 801 aa14.13□□□□□ -0.15
SNRNP70-208ENST00000599687 CDK13Q14004 1512 aaKnown RBP14.12□□□□□ -0.15
SNRNP70-208ENST00000599687 MKRN3Q13064 507 aaKnown RBP14.12□□□□□ -0.15
SNRNP70-208ENST00000599687 ATP1B4Q9UN42 357 aaPredicted RBP14.12□□□□□ -0.15
SNRNP70-208ENST00000599687 HECW1Q76N89 1606 aa14.11□□□□□ -0.15
SNRNP70-208ENST00000599687 ARAP3Q8WWN8 1544 aa14.1□□□□□ -0.15
SNRNP70-208ENST00000599687 PHLDB1Q86UU1 1377 aa14.09□□□□□ -0.15
SNRNP70-208ENST00000599687 KDM4FA0A1W2PPD8 638 aa14.09□□□□□ -0.15
SNRNP70-208ENST00000599687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.08□□□□□ -0.16
SNRNP70-208ENST00000599687 NEO1Q92859 1461 aa14.07□□□□□ -0.16
SNRNP70-208ENST00000599687 ZNF467Q7Z7K2 595 aaPredicted RBP14.07□□□□□ -0.16
SNRNP70-208ENST00000599687 LRRIQ1Q96JM4 1722 aa14.06□□□□□ -0.16
SNRNP70-208ENST00000599687 GSE1Q14687 1217 aa14.05□□□□□ -0.16
SNRNP70-208ENST00000599687 PDCD7Q8N8D1 485 aaKnown RBP14.05□□□□□ -0.16
SNRNP70-208ENST00000599687 HS3ST6Q96QI5 342 aa14.05□□□□□ -0.16
SNRNP70-208ENST00000599687 CDK11AQ9UQ88 783 aaPredicted RBP14.05□□□□□ -0.16
SNRNP70-208ENST00000599687 CLIP1P30622 1438 aa14.05□□□□□ -0.16
SNRNP70-208ENST00000599687 TTC37Q6PGP7 1564 aa14.05□□□□□ -0.16
SNRNP70-208ENST00000599687 FAM205CA6NFA0 338 aa14.04□□□□□ -0.16
SNRNP70-208ENST00000599687 RIOK3O14730 519 aaKnown RBP14.04□□□□□ -0.16
SNRNP70-208ENST00000599687 CASKIN1Q8WXD9 1431 aa14.04□□□□□ -0.16
SNRNP70-208ENST00000599687 RAPGEF3O95398 923 aa14.03□□□□□ -0.16
SNRNP70-208ENST00000599687 ARXQ96QS3 562 aa14.03□□□□□ -0.16
SNRNP70-208ENST00000599687 PCF11O94913 1555 aaKnown RBP14.03□□□□□ -0.16
SNRNP70-208ENST00000599687 TMEM132AQ24JP5 1023 aa14.02□□□□□ -0.17
SNRNP70-208ENST00000599687 FANCAO15360 1455 aa14.01□□□□□ -0.17
SNRNP70-208ENST00000599687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.01□□□□□ -0.173e-14■□□□□ 10.9
SNRNP70-208ENST00000599687 ADGRL1O94910 1474 aa14□□□□□ -0.17
SNRNP70-208ENST00000599687 PLCH2O75038 1416 aa14□□□□□ -0.17
SNRNP70-208ENST00000599687 TROQ12816 1431 aaPredicted RBP14□□□□□ -0.17
SNRNP70-208ENST00000599687 AKNAQ7Z591 1439 aa14□□□□□ -0.17
SNRNP70-208ENST00000599687 KIF14Q15058 1648 aa13.99□□□□□ -0.17
SNRNP70-208ENST00000599687 FRMPD1Q5SYB0 1578 aa13.99□□□□□ -0.17
SNRNP70-208ENST00000599687 CFAP74Q9C0B2 1584 aa13.99□□□□□ -0.17
SNRNP70-208ENST00000599687 CCDC18Q5T9S5 1454 aa13.99□□□□□ -0.17
SNRNP70-208ENST00000599687 ERICH6Q7L0X2 663 aa13.98□□□□□ -0.17
SNRNP70-208ENST00000599687 KRTAP3-3Q9BYR6 98 aa13.98□□□□□ -0.17
SNRNP70-208ENST00000599687 KRTAP3-2Q9BYR7 98 aa13.98□□□□□ -0.17
SNRNP70-208ENST00000599687 FYCO1Q9BQS8 1478 aa13.98□□□□□ -0.17
SNRNP70-208ENST00000599687 G3V3G9 751 aa13.97□□□□□ -0.17
SNRNP70-208ENST00000599687 STK25O00506 426 aa13.97□□□□□ -0.17
SNRNP70-208ENST00000599687 DENND4BO75064 1496 aaPredicted RBP13.97□□□□□ -0.17
SNRNP70-208ENST00000599687 RICTORQ6R327 1708 aa13.96□□□□□ -0.17
SNRNP70-208ENST00000599687 MYO5CQ9NQX4 1742 aa13.96□□□□□ -0.17
SNRNP70-208ENST00000599687 LOC105371045A0A1W2PR82 267 aa13.95□□□□□ -0.18
SNRNP70-208ENST00000599687 EFCAB2Q5VUJ9 269 aa13.95□□□□□ -0.18
SNRNP70-208ENST00000599687 CEP162Q5TB80 1403 aa13.94□□□□□ -0.18
SNRNP70-208ENST00000599687 SCAPERQ9BY12 1400 aa13.93□□□□□ -0.18
SNRNP70-208ENST00000599687 DAXXQ9UER7 740 aaPredicted RBP13.92□□□□□ -0.18
SNRNP70-208ENST00000599687 CDC42BPBQ9Y5S2 1711 aa13.9□□□□□ -0.18
SNRNP70-208ENST00000599687 POTEB3A0JP26 581 aa13.9□□□□□ -0.18
SNRNP70-208ENST00000599687 VGFO15240 615 aaPredicted RBP13.9□□□□□ -0.18
SNRNP70-208ENST00000599687 PSEN1P49768 467 aa13.9□□□□□ -0.18
SNRNP70-208ENST00000599687 POTEBQ6S5H4 581 aa13.9□□□□□ -0.18
SNRNP70-208ENST00000599687 ARHGAP5Q13017 1502 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms