RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 C9orf84Q5VXU9 1444 aa25.82■■□□□ 1.72
ARHGEF1-218ENST00000599589 USP47Q96K76 1375 aa25.81■■□□□ 1.72
ARHGEF1-218ENST00000599589 NEFMP07197 916 aa25.81■■□□□ 1.72
ARHGEF1-218ENST00000599589 PZPP20742 1482 aa25.81■■□□□ 1.72
ARHGEF1-218ENST00000599589 ANKRD50Q9ULJ7 1429 aa25.81■■□□□ 1.72
ARHGEF1-218ENST00000599589 EXOC6Q8TAG9 804 aa25.8■■□□□ 1.72
ARHGEF1-218ENST00000599589 TCERG1O14776 1098 aaKnown RBP25.8■■□□□ 1.72
ARHGEF1-218ENST00000599589 RRP1P56182 461 aaKnown RBP25.79■■□□□ 1.72
ARHGEF1-218ENST00000599589 ARHGEF5Q12774 1597 aa25.79■■□□□ 1.72
ARHGEF1-218ENST00000599589 PDE4AP27815 886 aa25.78■■□□□ 1.72
ARHGEF1-218ENST00000599589 HNRNPMP52272 730 aaKnown RBP eCLIP25.78■■□□□ 1.72
ARHGEF1-218ENST00000599589 ZNF326Q5BKZ1 582 aaKnown RBP25.78■■□□□ 1.72
ARHGEF1-218ENST00000599589 RSPH4AQ5TD94 716 aa25.77■■□□□ 1.72
ARHGEF1-218ENST00000599589 MBD5Q9P267 1494 aa25.77■■□□□ 1.72
ARHGEF1-218ENST00000599589 PREX2Q70Z35 1606 aa25.77■■□□□ 1.72
ARHGEF1-218ENST00000599589 CDC42BPBQ9Y5S2 1711 aa25.74■■□□□ 1.71
ARHGEF1-218ENST00000599589 USP35Q9P2H5 1018 aa25.74■■□□□ 1.71
ARHGEF1-218ENST00000599589 BACH2Q9BYV9 841 aa25.73■■□□□ 1.71
ARHGEF1-218ENST00000599589 SAMD9LQ8IVG5 1584 aa25.73■■□□□ 1.71
ARHGEF1-218ENST00000599589 KIAA1107Q9UPP5 1409 aa25.72■■□□□ 1.71
ARHGEF1-218ENST00000599589 KDM5CP41229 1560 aa25.72■■□□□ 1.71
ARHGEF1-218ENST00000599589 LRPPRCP42704 1394 aaKnown RBP25.71■■□□□ 1.71
ARHGEF1-218ENST00000599589 CCDC141Q6ZP82 1450 aa25.71■■□□□ 1.71
ARHGEF1-218ENST00000599589 UHRF1BP1LA0JNW5 1464 aa25.71■■□□□ 1.71
ARHGEF1-218ENST00000599589 ARID4BQ4LE39 1312 aaPredicted RBP25.71■■□□□ 1.71
ARHGEF1-218ENST00000599589 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.71■■□□□ 1.71
ARHGEF1-218ENST00000599589 KIF15Q9NS87 1388 aa25.69■■□□□ 1.7
ARHGEF1-218ENST00000599589 RCAN3Q9UKA8 241 aa25.69■■□□□ 1.7
ARHGEF1-218ENST00000599589 PKD2Q13563 968 aa25.68■■□□□ 1.7
ARHGEF1-218ENST00000599589 TTC37Q6PGP7 1564 aa25.68■■□□□ 1.7
ARHGEF1-218ENST00000599589 ARHGAP5Q13017 1502 aa25.67■■□□□ 1.7
ARHGEF1-218ENST00000599589 NUP155O75694 1391 aa25.66■■□□□ 1.7
ARHGEF1-218ENST00000599589 ROCK2O75116 1388 aaKnown RBP25.66■■□□□ 1.7
ARHGEF1-218ENST00000599589 PPM1GO15355 546 aaPredicted RBP25.66■■□□□ 1.7
ARHGEF1-218ENST00000599589 MS4A1P11836 297 aa25.66■■□□□ 1.7
ARHGEF1-218ENST00000599589 WASHC2CQ9Y4E1 1318 aa25.65■■□□□ 1.7
ARHGEF1-218ENST00000599589 BRD4O60885 1362 aaPredicted RBP25.64■■□□□ 1.69
ARHGEF1-218ENST00000599589 MYBBP1AQ9BQG0 1328 aaKnown RBP25.63■■□□□ 1.69
ARHGEF1-218ENST00000599589 ZCCHC11Q5TAX3 1644 aaKnown RBP25.62■■□□□ 1.69
ARHGEF1-218ENST00000599589 KDM5DQ9BY66 1539 aa25.62■■□□□ 1.69
ARHGEF1-218ENST00000599589 PLEKHH2Q8IVE3 1493 aa25.62■■□□□ 1.69
ARHGEF1-218ENST00000599589 SYCP2Q9BX26 1530 aa25.61■■□□□ 1.69
ARHGEF1-218ENST00000599589 MYO5CQ9NQX4 1742 aa25.6■■□□□ 1.69
ARHGEF1-218ENST00000599589 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.59■■□□□ 1.69
ARHGEF1-218ENST00000599589 MAST1Q9Y2H9 1570 aa25.57■■□□□ 1.68
ARHGEF1-218ENST00000599589 PLCH2O75038 1416 aa25.57■■□□□ 1.68
ARHGEF1-218ENST00000599589 RALBP1Q15311 655 aa25.57■■□□□ 1.68
ARHGEF1-218ENST00000599589 CARD11Q9BXL7 1154 aa25.56■■□□□ 1.68
ARHGEF1-218ENST00000599589 SKAP1Q86WV1 359 aa25.56■■□□□ 1.68
ARHGEF1-218ENST00000599589 RALGAPBQ86X10 1494 aa25.54■■□□□ 1.68
ARHGEF1-218ENST00000599589 EFCAB2Q5VUJ9 269 aa25.53■■□□□ 1.68
ARHGEF1-218ENST00000599589 KTN1Q86UP2 1357 aaKnown RBP25.53■■□□□ 1.68
ARHGEF1-218ENST00000599589 PLIN1O60240 522 aa25.52■■□□□ 1.68
ARHGEF1-218ENST00000599589 DDRGK1Q96HY6 314 aa25.52■■□□□ 1.68
ARHGEF1-218ENST00000599589 ST20-MTHFSA0A0A6YYL1 179 aa25.51■■□□□ 1.68
ARHGEF1-218ENST00000599589 PDE3BQ13370 1112 aa25.51■■□□□ 1.68
ARHGEF1-218ENST00000599589 CDCA7LQ96GN5 454 aa25.51■■□□□ 1.68
ARHGEF1-218ENST00000599589 BRPF3Q9ULD4 1205 aa25.51■■□□□ 1.68
ARHGEF1-218ENST00000599589 UHRF1BP1Q6BDS2 1440 aa25.5■■□□□ 1.67
ARHGEF1-218ENST00000599589 GSE1Q14687 1217 aa25.5■■□□□ 1.67
ARHGEF1-218ENST00000599589 E9PCH4 1651 aa25.49■■□□□ 1.67
ARHGEF1-218ENST00000599589 ARHGEF12Q9NZN5 1544 aa25.47■■□□□ 1.67
ARHGEF1-218ENST00000599589 PLXNC1O60486 1568 aa25.46■■□□□ 1.67
ARHGEF1-218ENST00000599589 FAM135AQ9P2D6 1515 aa25.46■■□□□ 1.67
ARHGEF1-218ENST00000599589 NFKBIBQ15653 356 aa25.46■■□□□ 1.67
ARHGEF1-218ENST00000599589 NLRP13Q86W25 1043 aa25.46■■□□□ 1.67
ARHGEF1-218ENST00000599589 CRBNQ96SW2 442 aa25.46■■□□□ 1.67
ARHGEF1-218ENST00000599589 SLC4A3P48751 1232 aa25.44■■□□□ 1.66
ARHGEF1-218ENST00000599589 KDM2AQ9Y2K7 1162 aa25.44■■□□□ 1.66
ARHGEF1-218ENST00000599589 ABCC1P33527 1531 aa25.41■■□□□ 1.66
ARHGEF1-218ENST00000599589 DUOX2Q9NRD8 1548 aa25.41■■□□□ 1.66
ARHGEF1-218ENST00000599589 ARAP3Q8WWN8 1544 aa25.4■■□□□ 1.66
ARHGEF1-218ENST00000599589 UNC13BO14795 1591 aa25.4■■□□□ 1.66
ARHGEF1-218ENST00000599589 PARD3Q8TEW0 1356 aa25.4■■□□□ 1.66
ARHGEF1-218ENST00000599589 WDR7Q9Y4E6 1490 aa25.4■■□□□ 1.66
ARHGEF1-218ENST00000599589 FRAT1Q92837 279 aaPredicted RBP25.39■■□□□ 1.65
ARHGEF1-218ENST00000599589 ERBINQ96RT1 1412 aa25.37■■□□□ 1.65
ARHGEF1-218ENST00000599589 TRAPPC8Q9Y2L5 1435 aa25.36■■□□□ 1.65
ARHGEF1-218ENST00000599589 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.36■■□□□ 1.659e-7■■■□□ 15.4
ARHGEF1-218ENST00000599589 DAXXQ9UER7 740 aaPredicted RBP25.35■■□□□ 1.65
ARHGEF1-218ENST00000599589 OSCARQ8IYS5 282 aa25.35■■□□□ 1.65
ARHGEF1-218ENST00000599589 DCAF11Q8TEB1 546 aa25.34■■□□□ 1.65
ARHGEF1-218ENST00000599589 C20orf194Q5TEA3 1177 aa25.33■■□□□ 1.65
ARHGEF1-218ENST00000599589 IQGAP3Q86VI3 1631 aa25.31■■□□□ 1.64
ARHGEF1-218ENST00000599589 SPAG9O60271 1321 aaKnown RBP25.31■■□□□ 1.64
ARHGEF1-218ENST00000599589 CCDC144AA2RUR9 1427 aa25.31■■□□□ 1.64
ARHGEF1-218ENST00000599589 RTEL1-TNFRSF6BF6WH68 1400 aa25.31■■□□□ 1.64
ARHGEF1-218ENST00000599589 KDM2BQ8NHM5 1336 aa25.3■■□□□ 1.64
ARHGEF1-218ENST00000599589 BLMP54132 1417 aaPredicted RBP25.29■■□□□ 1.64
ARHGEF1-218ENST00000599589 MAGI2Q86UL8 1455 aa25.29■■□□□ 1.64
ARHGEF1-218ENST00000599589 PER1O15534 1290 aaPredicted RBP25.29■■□□□ 1.64
ARHGEF1-218ENST00000599589 CC2D1BQ5T0F9 858 aaKnown RBP25.28■■□□□ 1.64
ARHGEF1-218ENST00000599589 AFAP1Q8N556 730 aa25.28■■□□□ 1.64
ARHGEF1-218ENST00000599589 ABCA9Q8IUA7 1624 aa25.27■■□□□ 1.64
ARHGEF1-218ENST00000599589 PLA2R1Q13018 1463 aa25.26■■□□□ 1.63
ARHGEF1-218ENST00000599589 ASXL2Q76L83 1435 aa25.26■■□□□ 1.63
ARHGEF1-218ENST00000599589 FANCAO15360 1455 aa25.25■■□□□ 1.63
ARHGEF1-218ENST00000599589 FAM161AQ3B820 660 aa25.25■■□□□ 1.63
ARHGEF1-218ENST00000599589 C8orf34Q49A92 452 aa25.24■■□□□ 1.63
ARHGEF1-218ENST00000599589 CENPQQ7L2Z9 268 aaPredicted RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms