RNA–Protein interactions for RNA: ENST00000599179.1

LINC00343-207, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-207ENST00000599179 CADPS2Q86UW7 1296 aa14.24□□□□□ -0.13
LINC00343-207ENST00000599179 BHMG1C9JSJ3 638 aaPredicted RBP14.23□□□□□ -0.13
LINC00343-207ENST00000599179 FBXW7Q969H0 707 aa14.23□□□□□ -0.13
LINC00343-207ENST00000599179 NBPF3Q9H094 633 aa14.23□□□□□ -0.13
LINC00343-207ENST00000599179 GOLGA8CPA6NN73 597 aa14.22□□□□□ -0.13
LINC00343-207ENST00000599179 BBXQ8WY36 941 aaPredicted RBP14.22□□□□□ -0.13
LINC00343-207ENST00000599179 MRPL50Q8N5N7 158 aaKnown RBP14.21□□□□□ -0.13
LINC00343-207ENST00000599179 PPP1R3GB7ZBB8 358 aa14.2□□□□□ -0.14
LINC00343-207ENST00000599179 PHF14O94880 888 aa14.19□□□□□ -0.14
LINC00343-207ENST00000599179 CAMK2BQ13554 666 aa14.19□□□□□ -0.14
LINC00343-207ENST00000599179 TYW1BQ6NUM6 668 aa14.19□□□□□ -0.14
LINC00343-207ENST00000599179 PCDHGA10Q9Y5H3 936 aa14.19□□□□□ -0.14
LINC00343-207ENST00000599179 NCAPD3P42695 1498 aa14.17□□□□□ -0.14
LINC00343-207ENST00000599179 PTPN5P54829 565 aa14.16□□□□□ -0.14
LINC00343-207ENST00000599179 THSD4Q6ZMP0 1018 aa14.16□□□□□ -0.14
LINC00343-207ENST00000599179 NESP48681 1621 aa14.15□□□□□ -0.14
LINC00343-207ENST00000599179 WNT2BQ93097 391 aa14.15□□□□□ -0.14
LINC00343-207ENST00000599179 EPAS1Q99814 870 aa14.14□□□□□ -0.15
LINC00343-207ENST00000599179 RABGEF1Q9UJ41 708 aa14.12□□□□□ -0.15
LINC00343-207ENST00000599179 DPYSL4O14531 572 aa14.09□□□□□ -0.15
LINC00343-207ENST00000599179 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.08□□□□□ -0.16
LINC00343-207ENST00000599179 AMER1Q5JTC6 1135 aaPredicted RBP14.07□□□□□ -0.16
LINC00343-207ENST00000599179 IFFO2Q5TF58 517 aa14.07□□□□□ -0.16
LINC00343-207ENST00000599179 ONECUT3O60422 494 aaPredicted RBP14.06□□□□□ -0.16
LINC00343-207ENST00000599179 COL9A1P20849 921 aa14.06□□□□□ -0.16
LINC00343-207ENST00000599179 LAPTM4BQ86VI4 370 aa14.06□□□□□ -0.16
LINC00343-207ENST00000599179 SPRYD3Q8NCJ5 442 aa14.06□□□□□ -0.16
LINC00343-207ENST00000599179 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
LINC00343-207ENST00000599179 THOC2Q8NI27 1593 aaKnown RBP14.05□□□□□ -0.16
LINC00343-207ENST00000599179 PROX2Q3B8N5 592 aa14.05□□□□□ -0.16
LINC00343-207ENST00000599179 ANKK1Q8NFD2 765 aa14.05□□□□□ -0.16
LINC00343-207ENST00000599179 C6orf132Q5T0Z8 1188 aa14.03□□□□□ -0.16
LINC00343-207ENST00000599179 RGS20O76081 388 aa13.99□□□□□ -0.17
LINC00343-207ENST00000599179 PDIA6Q15084 440 aa13.99□□□□□ -0.17
LINC00343-207ENST00000599179 SMARCA2P51531 1590 aa13.99□□□□□ -0.17
LINC00343-207ENST00000599179 SPDYE16A6NNV3 312 aaPredicted RBP13.98□□□□□ -0.17
LINC00343-207ENST00000599179 KIAA1468Q9P260 1216 aa13.98□□□□□ -0.17
LINC00343-207ENST00000599179 HMGXB3Q12766 1538 aa13.98□□□□□ -0.17
LINC00343-207ENST00000599179 DDX12PQ92771 950 aa13.97□□□□□ -0.17
LINC00343-207ENST00000599179 NYAP1Q6ZVC0 841 aa13.96□□□□□ -0.17
LINC00343-207ENST00000599179 TRIM6-TRIM34B2RNG4 842 aa13.95□□□□□ -0.18
LINC00343-207ENST00000599179 RBM33Q96EV2 1170 aaKnown RBP13.95□□□□□ -0.18
LINC00343-207ENST00000599179 SOWAHBA6NEL2 793 aa13.94□□□□□ -0.18
LINC00343-207ENST00000599179 EN1Q05925 392 aaPredicted RBP13.94□□□□□ -0.18
LINC00343-207ENST00000599179 NBR1Q14596 966 aa13.93□□□□□ -0.18
LINC00343-207ENST00000599179 ZFRQ96KR1 1074 aaKnown RBP13.93□□□□□ -0.18
LINC00343-207ENST00000599179 E2F4Q16254 413 aa13.92□□□□□ -0.18
LINC00343-207ENST00000599179 A0A0G2JS52 829 aa13.91□□□□□ -0.18
LINC00343-207ENST00000599179 FAM98CQ17RN3 349 aaKnown RBP13.91□□□□□ -0.18
LINC00343-207ENST00000599179 WDR70Q9NW82 654 aa13.91□□□□□ -0.18
LINC00343-207ENST00000599179 MAP3K7O43318 606 aa13.9□□□□□ -0.18
LINC00343-207ENST00000599179 ARIH1Q9Y4X5 557 aaPredicted RBP13.9□□□□□ -0.18
LINC00343-207ENST00000599179 BCAMP50895 628 aa13.89□□□□□ -0.19
LINC00343-207ENST00000599179 BAZ1BQ9UIG0 1483 aaKnown RBP13.88□□□□□ -0.19
LINC00343-207ENST00000599179 SEPT9Q9UHD8 586 aaPredicted RBP13.88□□□□□ -0.19
LINC00343-207ENST00000599179 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
LINC00343-207ENST00000599179 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
LINC00343-207ENST00000599179 ITGBL1O95965 494 aaPredicted RBP13.87□□□□□ -0.19
LINC00343-207ENST00000599179 PACS2Q86VP3 889 aa13.87□□□□□ -0.19
LINC00343-207ENST00000599179 PAXIP1Q6ZW49 1069 aaPredicted RBP13.86□□□□□ -0.19
LINC00343-207ENST00000599179 CFAP44Q96MT7 982 aa13.86□□□□□ -0.19
LINC00343-207ENST00000599179 CERKQ8TCT0 537 aa13.85□□□□□ -0.19
LINC00343-207ENST00000599179 SMARCA4P51532 1647 aa13.85□□□□□ -0.19
LINC00343-207ENST00000599179 LRCH3Q96II8 777 aa13.84□□□□□ -0.19
LINC00343-207ENST00000599179 RTN4Q9NQC3 1192 aaKnown RBP13.84□□□□□ -0.19
LINC00343-207ENST00000599179 KIF21AQ7Z4S6 1674 aa13.84□□□□□ -0.19
LINC00343-207ENST00000599179 TSR1Q2NL82 804 aaKnown RBP13.83□□□□□ -0.2
LINC00343-207ENST00000599179 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.83□□□□□ -0.2
LINC00343-207ENST00000599179 WBP1LQ9NX94 342 aa13.81□□□□□ -0.2
LINC00343-207ENST00000599179 TSR3Q9UJK0 312 aaKnown RBP13.81□□□□□ -0.2
LINC00343-207ENST00000599179 TSKSQ9UJT2 592 aa13.8□□□□□ -0.2
LINC00343-207ENST00000599179 MRC2Q9UBG0 1479 aa13.8□□□□□ -0.2
LINC00343-207ENST00000599179 BAZ1AQ9NRL2 1556 aaPredicted RBP13.79□□□□□ -0.2
LINC00343-207ENST00000599179 PRSS12P56730 875 aa13.77□□□□□ -0.21
LINC00343-207ENST00000599179 CDCA7LQ96GN5 454 aa13.77□□□□□ -0.21
LINC00343-207ENST00000599179 HPS5Q9UPZ3 1129 aa13.77□□□□□ -0.21
LINC00343-207ENST00000599179 WDR62O43379 1518 aa13.76□□□□□ -0.21
LINC00343-207ENST00000599179 GRXCR2A6NFK2 248 aa13.76□□□□□ -0.21
LINC00343-207ENST00000599179 KCNC4Q03721 635 aa13.76□□□□□ -0.21
LINC00343-207ENST00000599179 NBPF26B4DH59 902 aa13.73□□□□□ -0.21
LINC00343-207ENST00000599179 IRX2Q9BZI1 471 aaPredicted RBP13.73□□□□□ -0.21
LINC00343-207ENST00000599179 CADPSQ9ULU8 1353 aa13.72□□□□□ -0.21
LINC00343-207ENST00000599179 RBM27Q9P2N5 1060 aaKnown RBP13.72□□□□□ -0.21
LINC00343-207ENST00000599179 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.22
LINC00343-207ENST00000599179 PPP4CP60510 307 aa13.7□□□□□ -0.22
LINC00343-207ENST00000599179 OSBPP22059 807 aa13.68□□□□□ -0.22
LINC00343-207ENST00000599179 PRIM1P49642 420 aaKnown RBP13.67□□□□□ -0.22
LINC00343-207ENST00000599179 TATDN2Q93075 761 aa13.67□□□□□ -0.22
LINC00343-207ENST00000599179 SAMD7Q7Z3H4 446 aa13.66□□□□□ -0.22
LINC00343-207ENST00000599179 PNMA3Q9UL41 463 aa13.66□□□□□ -0.22
LINC00343-207ENST00000599179 RIMBP3CA6NJZ7 1639 aa13.65□□□□□ -0.22
LINC00343-207ENST00000599179 RIMBP3BA6NNM3 1639 aa13.65□□□□□ -0.22
LINC00343-207ENST00000599179 RIMBP3Q9UFD9 1639 aa13.65□□□□□ -0.22
LINC00343-207ENST00000599179 HDGFP51858 240 aaKnown RBP13.65□□□□□ -0.22
LINC00343-207ENST00000599179 FAM198AQ9UFP1 575 aa13.65□□□□□ -0.22
LINC00343-207ENST00000599179 SMAPO00193 183 aa13.64□□□□□ -0.23
LINC00343-207ENST00000599179 CDHR5Q9HBB8 845 aa13.63□□□□□ -0.23
LINC00343-207ENST00000599179 NECTIN2Q92692 538 aa13.62□□□□□ -0.23
LINC00343-207ENST00000599179 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
LINC00343-207ENST00000599179 MROH2BQ7Z745 1585 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms