RNA–Protein interactions for RNA: ENST00000599078.1

LINC00664-203, long intergenic non-protein coding RNA 664, humanhuman

TSL 1 (best) BASIC

Gene LINC00664, Length 3,760 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00664-203ENST00000599078 GPATCH8Q9UKJ3 1502 aaKnown RBP16.94■□□□□ 0.3
LINC00664-203ENST00000599078 KANK1Q14678 1352 aa16.93■□□□□ 0.3
LINC00664-203ENST00000599078 FRAT1Q92837 279 aaPredicted RBP16.92■□□□□ 0.3
LINC00664-203ENST00000599078 SAMD9Q5K651 1589 aa16.92■□□□□ 0.3
LINC00664-203ENST00000599078 TCOF1Q13428 1488 aaKnown RBP16.91■□□□□ 0.3
LINC00664-203ENST00000599078 WDR62O43379 1518 aa16.91■□□□□ 0.3
LINC00664-203ENST00000599078 MAGI1Q96QZ7 1491 aaPredicted RBP16.9■□□□□ 0.3
LINC00664-203ENST00000599078 RRP1P56182 461 aaKnown RBP16.9■□□□□ 0.3
LINC00664-203ENST00000599078 ARHGAP5Q13017 1502 aa16.9■□□□□ 0.3
LINC00664-203ENST00000599078 ADAMTS12P58397 1594 aa16.9■□□□□ 0.3
LINC00664-203ENST00000599078 TRAK1Q9UPV9 953 aa16.89■□□□□ 0.3
LINC00664-203ENST00000599078 STK26Q9P289 416 aa16.89■□□□□ 0.29
LINC00664-203ENST00000599078 PPM1GO15355 546 aaPredicted RBP16.88■□□□□ 0.29
LINC00664-203ENST00000599078 ARID4BQ4LE39 1312 aaPredicted RBP16.87■□□□□ 0.29
LINC00664-203ENST00000599078 KDM6BO15054 1643 aa16.87■□□□□ 0.29
LINC00664-203ENST00000599078 NEFMP07197 916 aa16.87■□□□□ 0.29
LINC00664-203ENST00000599078 DISP1Q96F81 1524 aa16.87■□□□□ 0.29
LINC00664-203ENST00000599078 MORC1Q86VD1 984 aa16.86■□□□□ 0.29
LINC00664-203ENST00000599078 RAPGEF6Q8TEU7 1601 aa16.85■□□□□ 0.29
LINC00664-203ENST00000599078 CRBNQ96SW2 442 aa16.84■□□□□ 0.29
LINC00664-203ENST00000599078 ADAMTS8Q9UP79 889 aa16.84■□□□□ 0.29
LINC00664-203ENST00000599078 U2SURPO15042 1029 aaKnown RBP16.83■□□□□ 0.29
LINC00664-203ENST00000599078 PDE3BQ13370 1112 aa16.83■□□□□ 0.29
LINC00664-203ENST00000599078 ATP10BO94823 1461 aa16.83■□□□□ 0.28
LINC00664-203ENST00000599078 KIAA0556O60303 1618 aa16.83■□□□□ 0.28
LINC00664-203ENST00000599078 GOLGA2Q08379 1002 aa16.83■□□□□ 0.28
LINC00664-203ENST00000599078 TARBP1Q13395 1621 aaKnown RBP16.83■□□□□ 0.28
LINC00664-203ENST00000599078 CFAP70Q5T0N1 1121 aa16.82■□□□□ 0.28
LINC00664-203ENST00000599078 RRP7AQ9Y3A4 280 aaKnown RBP16.82■□□□□ 0.28
LINC00664-203ENST00000599078 BRD4O60885 1362 aaPredicted RBP16.82■□□□□ 0.28
LINC00664-203ENST00000599078 APAF1O14727 1248 aa16.82■□□□□ 0.28
LINC00664-203ENST00000599078 FANCIQ9NVI1 1328 aa16.82■□□□□ 0.28
LINC00664-203ENST00000599078 CFAP53Q96M91 514 aa16.81■□□□□ 0.28
LINC00664-203ENST00000599078 ESF1Q9H501 851 aaKnown RBP16.81■□□□□ 0.28
LINC00664-203ENST00000599078 MSH5O43196 834 aa16.81■□□□□ 0.28
LINC00664-203ENST00000599078 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
LINC00664-203ENST00000599078 POGKQ9P215 609 aa16.8■□□□□ 0.28
LINC00664-203ENST00000599078 MLECQ14165 292 aa16.79■□□□□ 0.28
LINC00664-203ENST00000599078 PZPP20742 1482 aa16.79■□□□□ 0.28
LINC00664-203ENST00000599078 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
LINC00664-203ENST00000599078 SLC24A1O60721 1099 aa16.78■□□□□ 0.28
LINC00664-203ENST00000599078 WASHC2CQ9Y4E1 1318 aa16.78■□□□□ 0.28
LINC00664-203ENST00000599078 CCDC141Q6ZP82 1450 aa16.77■□□□□ 0.28
LINC00664-203ENST00000599078 TCERG1O14776 1098 aaKnown RBP16.77■□□□□ 0.28
LINC00664-203ENST00000599078 DEKP35659 375 aaKnown RBP16.77■□□□□ 0.27
LINC00664-203ENST00000599078 TMEM132EQ6IEE7 984 aa16.77■□□□□ 0.27
LINC00664-203ENST00000599078 IPO9Q96P70 1041 aaKnown RBP16.77■□□□□ 0.27
LINC00664-203ENST00000599078 U2AF1L5P0DN76 240 aaPredicted RBP16.75■□□□□ 0.27
LINC00664-203ENST00000599078 PDE4AP27815 886 aa16.75■□□□□ 0.27
LINC00664-203ENST00000599078 U2AF1Q01081 240 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC00664-203ENST00000599078 SKAP1Q86WV1 359 aa16.75■□□□□ 0.27
LINC00664-203ENST00000599078 PLEKHH2Q8IVE3 1493 aa16.75■□□□□ 0.27
LINC00664-203ENST00000599078 SMG6Q86US8 1419 aaKnown RBP16.75■□□□□ 0.27
LINC00664-203ENST00000599078 CLUAP1Q96AJ1 413 aa16.75■□□□□ 0.27
LINC00664-203ENST00000599078 KIF14Q15058 1648 aa16.75■□□□□ 0.27
LINC00664-203ENST00000599078 EIF4G3O43432 1585 aaKnown RBP16.74■□□□□ 0.27
LINC00664-203ENST00000599078 TEX14Q8IWB6 1497 aa16.74■□□□□ 0.27
LINC00664-203ENST00000599078 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
LINC00664-203ENST00000599078 PPP2R1AP30153 589 aa16.73■□□□□ 0.27
LINC00664-203ENST00000599078 ARXQ96QS3 562 aa16.73■□□□□ 0.27
LINC00664-203ENST00000599078 EIF3AQ14152 1382 aaKnown RBP16.73■□□□□ 0.27
LINC00664-203ENST00000599078 UPF2Q9HAU5 1272 aaKnown RBP16.73■□□□□ 0.27
LINC00664-203ENST00000599078 PAK3O75914 559 aaPredicted RBP16.72■□□□□ 0.27
LINC00664-203ENST00000599078 SCAPERQ9BY12 1400 aa16.72■□□□□ 0.27
LINC00664-203ENST00000599078 DNMT1P26358 1616 aaKnown RBP16.71■□□□□ 0.27
LINC00664-203ENST00000599078 SLC4A3P48751 1232 aa16.71■□□□□ 0.27
LINC00664-203ENST00000599078 FTSJ3Q8IY81 847 aaKnown RBP16.71■□□□□ 0.27
LINC00664-203ENST00000599078 DHX29Q7Z478 1369 aaKnown RBP16.7■□□□□ 0.26
LINC00664-203ENST00000599078 DDRGK1Q96HY6 314 aa16.7■□□□□ 0.26
LINC00664-203ENST00000599078 ERBINQ96RT1 1412 aa16.7■□□□□ 0.26
LINC00664-203ENST00000599078 MAPK8IP3Q9UPT6 1336 aa16.7■□□□□ 0.26
LINC00664-203ENST00000599078 DENND4BO75064 1496 aaPredicted RBP16.69■□□□□ 0.26
LINC00664-203ENST00000599078 DISP3Q9P2K9 1392 aa16.69■□□□□ 0.26
LINC00664-203ENST00000599078 SLC12A5Q9H2X9 1139 aa16.65■□□□□ 0.26
LINC00664-203ENST00000599078 COG6Q9Y2V7 657 aa16.65■□□□□ 0.26
LINC00664-203ENST00000599078 GCC2Q8IWJ2 1684 aa16.65■□□□□ 0.26
LINC00664-203ENST00000599078 SPATA31E1Q6ZUB1 1445 aa16.65■□□□□ 0.26
LINC00664-203ENST00000599078 PLEKHG5O94827 1062 aa16.64■□□□□ 0.25
LINC00664-203ENST00000599078 CENPJQ9HC77 1338 aaPredicted RBP16.64■□□□□ 0.25
LINC00664-203ENST00000599078 C20orf194Q5TEA3 1177 aa16.64■□□□□ 0.25
LINC00664-203ENST00000599078 CEP170Q5SW79 1584 aa16.63■□□□□ 0.25
LINC00664-203ENST00000599078 SOX12O15370 315 aa16.63■□□□□ 0.25
LINC00664-203ENST00000599078 RTN4Q9NQC3 1192 aaKnown RBP16.63■□□□□ 0.25
LINC00664-203ENST00000599078 RALGAPBQ86X10 1494 aa16.63■□□□□ 0.25
LINC00664-203ENST00000599078 LRRIQ1Q96JM4 1722 aa16.62■□□□□ 0.25
LINC00664-203ENST00000599078 SYCP2Q9BX26 1530 aa16.62■□□□□ 0.25
LINC00664-203ENST00000599078 NUP160Q12769 1436 aa16.62■□□□□ 0.25
LINC00664-203ENST00000599078 ITSN2Q9NZM3 1697 aa16.62■□□□□ 0.25
LINC00664-203ENST00000599078 MINK1Q8N4C8 1332 aaPredicted RBP16.62■□□□□ 0.25
LINC00664-203ENST00000599078 TESK2Q96S53 571 aa16.61■□□□□ 0.25
LINC00664-203ENST00000599078 BCAR3O75815 825 aa16.6■□□□□ 0.25
LINC00664-203ENST00000599078 CYB5RLQ6IPT4 315 aa16.6■□□□□ 0.25
LINC00664-203ENST00000599078 CABP2Q9NPB3 220 aa16.6■□□□□ 0.25
LINC00664-203ENST00000599078 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
LINC00664-203ENST00000599078 ADGRF5Q8IZF2 1346 aa16.59■□□□□ 0.25
LINC00664-203ENST00000599078 RAPGEF3O95398 923 aa16.59■□□□□ 0.25
LINC00664-203ENST00000599078 E9PSI1 815 aa16.59■□□□□ 0.25
LINC00664-203ENST00000599078 SPRYD3Q8NCJ5 442 aa16.59■□□□□ 0.25
LINC00664-203ENST00000599078 PRAG1Q86YV5 1406 aa16.58■□□□□ 0.25
LINC00664-203ENST00000599078 FAM135AQ9P2D6 1515 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms