RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 SLAIN1Q8ND83 568 aa17.13■□□□□ 0.33
SMG9-207ENST00000598860 EEA1Q15075 1411 aa17.13■□□□□ 0.33
SMG9-207ENST00000598860 KIF27Q86VH2 1401 aa17.12■□□□□ 0.33
SMG9-207ENST00000598860 IGF1RP08069 1367 aa17.08■□□□□ 0.32
SMG9-207ENST00000598860 WDR70Q9NW82 654 aa17.08■□□□□ 0.32
SMG9-207ENST00000598860 NUP160Q12769 1436 aa17.07■□□□□ 0.32
SMG9-207ENST00000598860 DDX27Q96GQ7 796 aaKnown RBP17.07■□□□□ 0.32
SMG9-207ENST00000598860 ARAP1Q96P48 1450 aa17.06■□□□□ 0.32
SMG9-207ENST00000598860 DSG2Q14126 1118 aa17.06■□□□□ 0.32
SMG9-207ENST00000598860 MFSD10Q14728 455 aa17.06■□□□□ 0.32
SMG9-207ENST00000598860 CEP170Q5SW79 1584 aa17.04■□□□□ 0.32
SMG9-207ENST00000598860 FOXK1P85037 733 aa17.04■□□□□ 0.32
SMG9-207ENST00000598860 PPP1R15BQ5SWA1 713 aa17.04■□□□□ 0.32
SMG9-207ENST00000598860 CUL7Q14999 1698 aa17.03■□□□□ 0.32
SMG9-207ENST00000598860 P3H3Q8IVL6 736 aa17.01■□□□□ 0.31
SMG9-207ENST00000598860 PLPP6Q8IY26 295 aa17.01■□□□□ 0.31
SMG9-207ENST00000598860 RUSC2Q8N2Y8 1516 aa16.99■□□□□ 0.31
SMG9-207ENST00000598860 JPH4Q96JJ6 628 aa16.98■□□□□ 0.31
SMG9-207ENST00000598860 CARMIL1Q5VZK9 1371 aa16.98■□□□□ 0.31
SMG9-207ENST00000598860 SHROOM2Q13796 1616 aa16.93■□□□□ 0.3
SMG9-207ENST00000598860 KIF21BO75037 1637 aa16.92■□□□□ 0.3
SMG9-207ENST00000598860 ERCC6L2Q5T890 1561 aa16.92■□□□□ 0.3
SMG9-207ENST00000598860 PRG4Q92954 1404 aaPredicted RBP16.91■□□□□ 0.3
SMG9-207ENST00000598860 E2F4Q16254 413 aa16.91■□□□□ 0.3
SMG9-207ENST00000598860 KCNV2Q8TDN2 545 aa16.91■□□□□ 0.3
SMG9-207ENST00000598860 KIAA0586Q9BVV6 1533 aa16.9■□□□□ 0.3
SMG9-207ENST00000598860 PRXQ9BXM0 1461 aa16.87■□□□□ 0.29
SMG9-207ENST00000598860 FAM9AQ8IZU1 332 aaPredicted RBP16.87■□□□□ 0.29
SMG9-207ENST00000598860 CAMK2BQ13554 666 aa16.86■□□□□ 0.29
SMG9-207ENST00000598860 RAPGEF2Q9Y4G8 1499 aa16.85■□□□□ 0.29
SMG9-207ENST00000598860 HOXB3P14651 431 aaPredicted RBP16.83■□□□□ 0.28
SMG9-207ENST00000598860 EMILIN3Q9NT22 766 aa16.83■□□□□ 0.28
SMG9-207ENST00000598860 SNPHO15079 494 aa16.82■□□□□ 0.28
SMG9-207ENST00000598860 DOK7Q18PE1 504 aa16.82■□□□□ 0.28
SMG9-207ENST00000598860 GOLGA3Q08378 1498 aa16.81■□□□□ 0.28
SMG9-207ENST00000598860 UPF1Q92900 1129 aaKnown RBP eCLIP16.81■□□□□ 0.28
SMG9-207ENST00000598860 CTTNBP2Q8WZ74 1663 aa16.8■□□□□ 0.28
SMG9-207ENST00000598860 SLC34A2O95436 690 aa16.79■□□□□ 0.28
SMG9-207ENST00000598860 ZNF710Q8N1W2 664 aa16.76■□□□□ 0.27
SMG9-207ENST00000598860 OXER1Q8TDS5 423 aa16.75■□□□□ 0.27
SMG9-207ENST00000598860 PTCD2Q8WV60 388 aaKnown RBP16.75■□□□□ 0.27
SMG9-207ENST00000598860 CARMIL2Q6F5E8 1435 aa16.75■□□□□ 0.27
SMG9-207ENST00000598860 IQGAP2Q13576 1575 aa16.75■□□□□ 0.27
SMG9-207ENST00000598860 RIMBP2O15034 1052 aa16.74■□□□□ 0.27
SMG9-207ENST00000598860 PLSCR2Q9NRY7 297 aa16.74■□□□□ 0.27
SMG9-207ENST00000598860 DPYSL4O14531 572 aa16.72■□□□□ 0.27
SMG9-207ENST00000598860 MAP3K9P80192 1104 aa16.72■□□□□ 0.27
SMG9-207ENST00000598860 PCDHGA4Q9Y5G9 962 aa16.72■□□□□ 0.27
SMG9-207ENST00000598860 TTBK1Q5TCY1 1321 aaPredicted RBP16.71■□□□□ 0.27
SMG9-207ENST00000598860 PTPRGP23470 1445 aa16.71■□□□□ 0.27
SMG9-207ENST00000598860 ARHGEF1Q92888 912 aaKnown RBP16.71■□□□□ 0.27
SMG9-207ENST00000598860 TBC1D12O60347 775 aa16.7■□□□□ 0.26
SMG9-207ENST00000598860 TNIKQ9UKE5 1360 aa16.69■□□□□ 0.26
SMG9-207ENST00000598860 ARSIQ5FYB1 569 aa16.68■□□□□ 0.26
SMG9-207ENST00000598860 ZSWIM6Q9HCJ5 1215 aa16.68■□□□□ 0.26
SMG9-207ENST00000598860 ARIH1Q9Y4X5 557 aaPredicted RBP16.68■□□□□ 0.26
SMG9-207ENST00000598860 GPR153Q6NV75 609 aa16.66■□□□□ 0.26
SMG9-207ENST00000598860 KHSRPQ92945 711 aaKnown RBP eCLIP16.66■□□□□ 0.26
SMG9-207ENST00000598860 FAM163AQ96GL9 167 aaPredicted RBP16.66■□□□□ 0.26
SMG9-207ENST00000598860 UGGT2Q9NYU1 1516 aa16.65■□□□□ 0.26
SMG9-207ENST00000598860 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
SMG9-207ENST00000598860 LMOD2Q6P5Q4 547 aa16.64■□□□□ 0.25
SMG9-207ENST00000598860 UBTFP17480 764 aaKnown RBP16.63■□□□□ 0.25
SMG9-207ENST00000598860 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.63■□□□□ 0.25
SMG9-207ENST00000598860 ADCY10Q96PN6 1610 aa16.63■□□□□ 0.25
SMG9-207ENST00000598860 ST18O60284 1047 aa16.62■□□□□ 0.25
SMG9-207ENST00000598860 EVI5O60447 810 aa16.6■□□□□ 0.25
SMG9-207ENST00000598860 NUDT7P0C024 238 aa16.6■□□□□ 0.25
SMG9-207ENST00000598860 HOXB1P14653 301 aaPredicted RBP16.6■□□□□ 0.25
SMG9-207ENST00000598860 PDIA6Q15084 440 aa16.58■□□□□ 0.24
SMG9-207ENST00000598860 KIAA0556O60303 1618 aa16.57■□□□□ 0.24
SMG9-207ENST00000598860 UACAQ9BZF9 1416 aa16.57■□□□□ 0.24
SMG9-207ENST00000598860 LOC105371045A0A1W2PR82 267 aa16.56■□□□□ 0.24
SMG9-207ENST00000598860 SPDYE16A6NNV3 312 aaPredicted RBP16.56■□□□□ 0.24
SMG9-207ENST00000598860 TULP1O00294 542 aaPredicted RBP16.56■□□□□ 0.24
SMG9-207ENST00000598860 FAM69CQ0P6D2 419 aa16.56■□□□□ 0.24
SMG9-207ENST00000598860 EFCAB5A4FU69 1503 aa16.55■□□□□ 0.24
SMG9-207ENST00000598860 MAPKBP1O60336 1514 aa16.55■□□□□ 0.24
SMG9-207ENST00000598860 UHRF1BP1LA0JNW5 1464 aa16.54■□□□□ 0.24
SMG9-207ENST00000598860 ZNF316A6NFI3 1004 aaPredicted RBP16.54■□□□□ 0.24
SMG9-207ENST00000598860 ABCC2Q92887 1545 aa16.54■□□□□ 0.24
SMG9-207ENST00000598860 KDM4FA0A1W2PPD8 638 aa16.53■□□□□ 0.24
SMG9-207ENST00000598860 SAMD9Q5K651 1589 aa16.52■□□□□ 0.24
SMG9-207ENST00000598860 ABCC10Q5T3U5 1492 aa16.52■□□□□ 0.23
SMG9-207ENST00000598860 SEMA3EO15041 775 aa16.51■□□□□ 0.23
SMG9-207ENST00000598860 LCE2DQ5TA82 110 aaPredicted RBP16.51■□□□□ 0.23
SMG9-207ENST00000598860 ANO8Q9HCE9 1232 aaPredicted RBP16.51■□□□□ 0.23
SMG9-207ENST00000598860 KIF13AQ9H1H9 1805 aa16.51■□□□□ 0.23
SMG9-207ENST00000598860 CEP162Q5TB80 1403 aa16.5■□□□□ 0.23
SMG9-207ENST00000598860 TESPA1A2RU30 521 aaPredicted RBP16.49■□□□□ 0.23
SMG9-207ENST00000598860 RANGAP1P46060 587 aaPredicted RBP16.49■□□□□ 0.23
SMG9-207ENST00000598860 MARVELD3Q96A59 401 aa16.49■□□□□ 0.23
SMG9-207ENST00000598860 CLIP1P30622 1438 aa16.47■□□□□ 0.23
SMG9-207ENST00000598860 LHX6Q9UPM6 363 aa16.47■□□□□ 0.23
SMG9-207ENST00000598860 ASXL2Q76L83 1435 aa16.46■□□□□ 0.23
SMG9-207ENST00000598860 KDM5BQ9UGL1 1544 aa16.46■□□□□ 0.23
SMG9-207ENST00000598860 PLB1Q6P1J6 1458 aa16.46■□□□□ 0.23
SMG9-207ENST00000598860 EMP3P54852 163 aa16.45■□□□□ 0.22
SMG9-207ENST00000598860 DIP2BQ9P265 1576 aa16.44■□□□□ 0.22
SMG9-207ENST00000598860 DDX12PQ92771 950 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms