RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 ZBED9Q6R2W3 1325 aa20.67■□□□□ 0.9
TRPM4-209ENST00000598502 SPATA31E1Q6ZUB1 1445 aa20.67■□□□□ 0.9
TRPM4-209ENST00000598502 ADGRL2O95490 1459 aa20.66■□□□□ 0.9
TRPM4-209ENST00000598502 TMC1Q8TDI8 760 aa20.66■□□□□ 0.9
TRPM4-209ENST00000598502 CDC42BPAQ5VT25 1732 aa20.65■□□□□ 0.9
TRPM4-209ENST00000598502 SLC4A3P48751 1232 aa20.65■□□□□ 0.9
TRPM4-209ENST00000598502 ADGBQ8N7X0 1667 aa20.64■□□□□ 0.89
TRPM4-209ENST00000598502 ROCK2O75116 1388 aaKnown RBP20.63■□□□□ 0.89
TRPM4-209ENST00000598502 ARHGAP5Q13017 1502 aa20.62■□□□□ 0.89
TRPM4-209ENST00000598502 PPM1GO15355 546 aaPredicted RBP20.62■□□□□ 0.89
TRPM4-209ENST00000598502 NBPF1Q3BBV0 1214 aa20.62■□□□□ 0.89
TRPM4-209ENST00000598502 ARXQ96QS3 562 aa20.61■□□□□ 0.89
TRPM4-209ENST00000598502 ADCY10Q96PN6 1610 aa20.6■□□□□ 0.89
TRPM4-209ENST00000598502 NUDCQ9Y266 331 aa20.6■□□□□ 0.89
TRPM4-209ENST00000598502 CCDC141Q6ZP82 1450 aa20.58■□□□□ 0.89
TRPM4-209ENST00000598502 PDE4AP27815 886 aa20.58■□□□□ 0.88
TRPM4-209ENST00000598502 MBD5Q9P267 1494 aa20.57■□□□□ 0.88
TRPM4-209ENST00000598502 CCDC144AA2RUR9 1427 aa20.57■□□□□ 0.88
TRPM4-209ENST00000598502 ERCC6L2Q5T890 1561 aa20.56■□□□□ 0.88
TRPM4-209ENST00000598502 RSPH4AQ5TD94 716 aa20.56■□□□□ 0.88
TRPM4-209ENST00000598502 CROCC2H7BZ55 1655 aa20.56■□□□□ 0.88
TRPM4-209ENST00000598502 SYCP2Q9BX26 1530 aa20.55■□□□□ 0.88
TRPM4-209ENST00000598502 EXOC6Q8TAG9 804 aa20.55■□□□□ 0.88
TRPM4-209ENST00000598502 DHX29Q7Z478 1369 aaKnown RBP20.53■□□□□ 0.88
TRPM4-209ENST00000598502 SKAP1Q86WV1 359 aa20.53■□□□□ 0.88
TRPM4-209ENST00000598502 AFAP1Q8N556 730 aa20.53■□□□□ 0.88
TRPM4-209ENST00000598502 EFCAB2Q5VUJ9 269 aa20.52■□□□□ 0.88
TRPM4-209ENST00000598502 SHANK2Q9UPX8 1470 aa20.52■□□□□ 0.88
TRPM4-209ENST00000598502 GSE1Q14687 1217 aa20.52■□□□□ 0.88
TRPM4-209ENST00000598502 CHD1O14646 1710 aa20.52■□□□□ 0.88
TRPM4-209ENST00000598502 BCORL1Q5H9F3 1711 aa20.52■□□□□ 0.88
TRPM4-209ENST00000598502 SAMD9LQ8IVG5 1584 aa20.52■□□□□ 0.87
TRPM4-209ENST00000598502 PLEKHH2Q8IVE3 1493 aa20.52■□□□□ 0.87
TRPM4-209ENST00000598502 CC2D1BQ5T0F9 858 aaKnown RBP20.51■□□□□ 0.87
TRPM4-209ENST00000598502 UBE2Q2Q8WVN8 375 aa20.5■□□□□ 0.87
TRPM4-209ENST00000598502 USP35Q9P2H5 1018 aa20.49■□□□□ 0.87
TRPM4-209ENST00000598502 FAM135AQ9P2D6 1515 aa20.49■□□□□ 0.87
TRPM4-209ENST00000598502 TCERG1O14776 1098 aaKnown RBP20.47■□□□□ 0.87
TRPM4-209ENST00000598502 TTC37Q6PGP7 1564 aa20.47■□□□□ 0.87
TRPM4-209ENST00000598502 RALGAPBQ86X10 1494 aa20.46■□□□□ 0.87
TRPM4-209ENST00000598502 FRAT1Q92837 279 aaPredicted RBP20.46■□□□□ 0.87
TRPM4-209ENST00000598502 CDC42BPBQ9Y5S2 1711 aa20.46■□□□□ 0.87
TRPM4-209ENST00000598502 PNISRQ8TF01 805 aaKnown RBP20.45■□□□□ 0.86
TRPM4-209ENST00000598502 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.44■□□□□ 0.86
TRPM4-209ENST00000598502 SPAG9O60271 1321 aaKnown RBP20.44■□□□□ 0.86
TRPM4-209ENST00000598502 KDM5CP41229 1560 aa20.44■□□□□ 0.86
TRPM4-209ENST00000598502 NFKBIBQ15653 356 aa20.43■□□□□ 0.86
TRPM4-209ENST00000598502 UHRF1BP1Q6BDS2 1440 aa20.43■□□□□ 0.86
TRPM4-209ENST00000598502 PLIN1O60240 522 aa20.42■□□□□ 0.86
TRPM4-209ENST00000598502 DDRGK1Q96HY6 314 aa20.42■□□□□ 0.86
TRPM4-209ENST00000598502 ARHGEF5Q12774 1597 aa20.41■□□□□ 0.86
TRPM4-209ENST00000598502 ARID4BQ4LE39 1312 aaPredicted RBP20.41■□□□□ 0.86
TRPM4-209ENST00000598502 PREX2Q70Z35 1606 aa20.4■□□□□ 0.86
TRPM4-209ENST00000598502 PANK3Q9H999 370 aa20.39■□□□□ 0.85
TRPM4-209ENST00000598502 MYBBP1AQ9BQG0 1328 aaKnown RBP20.38■□□□□ 0.85
TRPM4-209ENST00000598502 RCAN3Q9UKA8 241 aa20.38■□□□□ 0.85
TRPM4-209ENST00000598502 TRAPPC8Q9Y2L5 1435 aa20.38■□□□□ 0.85
TRPM4-209ENST00000598502 ARHGEF12Q9NZN5 1544 aa20.38■□□□□ 0.85
TRPM4-209ENST00000598502 KIF3BO15066 747 aa20.38■□□□□ 0.85
TRPM4-209ENST00000598502 ABCC2Q92887 1545 aa20.37■□□□□ 0.85
TRPM4-209ENST00000598502 BACH2Q9BYV9 841 aa20.37■□□□□ 0.85
TRPM4-209ENST00000598502 PRAG1Q86YV5 1406 aa20.37■□□□□ 0.85
TRPM4-209ENST00000598502 PLA2R1Q13018 1463 aa20.37■□□□□ 0.85
TRPM4-209ENST00000598502 RALBP1Q15311 655 aa20.36■□□□□ 0.85
TRPM4-209ENST00000598502 RRP1P56182 461 aaKnown RBP20.36■□□□□ 0.85
TRPM4-209ENST00000598502 CHGAP10645 457 aaKnown RBP20.35■□□□□ 0.85
TRPM4-209ENST00000598502 KTN1Q86UP2 1357 aaKnown RBP20.35■□□□□ 0.85
TRPM4-209ENST00000598502 RGS3P49796 1198 aa20.35■□□□□ 0.85
TRPM4-209ENST00000598502 TMF1P82094 1093 aa20.34■□□□□ 0.85
TRPM4-209ENST00000598502 KDM5DQ9BY66 1539 aa20.34■□□□□ 0.85
TRPM4-209ENST00000598502 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
TRPM4-209ENST00000598502 A2MP01023 1474 aa20.33■□□□□ 0.85
TRPM4-209ENST00000598502 DISP3Q9P2K9 1392 aa20.33■□□□□ 0.85
TRPM4-209ENST00000598502 SMG6Q86US8 1419 aaKnown RBP20.33■□□□□ 0.84
TRPM4-209ENST00000598502 PLCH2O75038 1416 aa20.33■□□□□ 0.84
TRPM4-209ENST00000598502 NLRP13Q86W25 1043 aa20.32■□□□□ 0.84
TRPM4-209ENST00000598502 FRAT2O75474 233 aaPredicted RBP20.31■□□□□ 0.84
TRPM4-209ENST00000598502 POLR1AO95602 1720 aaPredicted RBP20.3■□□□□ 0.84
TRPM4-209ENST00000598502 TESK2Q96S53 571 aa20.29■□□□□ 0.84
TRPM4-209ENST00000598502 MYO5CQ9NQX4 1742 aa20.28■□□□□ 0.84
TRPM4-209ENST00000598502 WASHC2CQ9Y4E1 1318 aa20.28■□□□□ 0.84
TRPM4-209ENST00000598502 GLIPR1L2Q4G1C9 344 aa20.28■□□□□ 0.84
TRPM4-209ENST00000598502 NAP1L5Q96NT1 182 aaPredicted RBP20.28■□□□□ 0.84
TRPM4-209ENST00000598502 BRD4O60885 1362 aaPredicted RBP20.27■□□□□ 0.84
TRPM4-209ENST00000598502 CDCA7LQ96GN5 454 aa20.26■□□□□ 0.83
TRPM4-209ENST00000598502 SCAPERQ9BY12 1400 aa20.25■□□□□ 0.83
TRPM4-209ENST00000598502 RSPH6AQ9H0K4 717 aa20.25■□□□□ 0.83
TRPM4-209ENST00000598502 VSIG10Q8N0Z9 540 aa20.25■□□□□ 0.83
TRPM4-209ENST00000598502 DUOX2Q9NRD8 1548 aa20.25■□□□□ 0.83
TRPM4-209ENST00000598502 PER1O15534 1290 aaPredicted RBP20.25■□□□□ 0.83
TRPM4-209ENST00000598502 KNSTRNQ9Y448 316 aa20.25■□□□□ 0.83
TRPM4-209ENST00000598502 PKNOX2Q96KN3 472 aa20.24■□□□□ 0.83
TRPM4-209ENST00000598502 ERBINQ96RT1 1412 aa20.24■□□□□ 0.83
TRPM4-209ENST00000598502 CRBNQ96SW2 442 aa20.23■□□□□ 0.83
TRPM4-209ENST00000598502 ZCCHC11Q5TAX3 1644 aaKnown RBP20.23■□□□□ 0.83
TRPM4-209ENST00000598502 SHROOM2Q13796 1616 aa20.23■□□□□ 0.83
TRPM4-209ENST00000598502 NPM1P06748 294 aaKnown RBP eCLIP20.22■□□□□ 0.83
TRPM4-209ENST00000598502 MS4A1P11836 297 aa20.22■□□□□ 0.83
TRPM4-209ENST00000598502 GGT6Q6P531 493 aa20.21■□□□□ 0.83
TRPM4-209ENST00000598502 SLKQ9H2G2 1235 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms