RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 NUDCQ9Y266 331 aa20.76■□□□□ 0.91
ZNF541-205ENST00000595558 ARHGEF12Q9NZN5 1544 aa20.76■□□□□ 0.91
ZNF541-205ENST00000595558 CCDC141Q6ZP82 1450 aa20.76■□□□□ 0.91
ZNF541-205ENST00000595558 KDM5CP41229 1560 aa20.76■□□□□ 0.91
ZNF541-205ENST00000595558 PLEKHH2Q8IVE3 1493 aa20.75■□□□□ 0.91
ZNF541-205ENST00000595558 PNISRQ8TF01 805 aaKnown RBP20.74■□□□□ 0.91
ZNF541-205ENST00000595558 SHANK2Q9UPX8 1470 aa20.72■□□□□ 0.91
ZNF541-205ENST00000595558 TMC1Q8TDI8 760 aa20.7■□□□□ 0.9
ZNF541-205ENST00000595558 FAM135AQ9P2D6 1515 aa20.69■□□□□ 0.9
ZNF541-205ENST00000595558 MYT1LQ9UL68 1186 aa20.69■□□□□ 0.9
ZNF541-205ENST00000595558 RNF123Q5XPI4 1314 aa20.69■□□□□ 0.9
ZNF541-205ENST00000595558 PREX2Q70Z35 1606 aa20.68■□□□□ 0.9
ZNF541-205ENST00000595558 PLA2R1Q13018 1463 aa20.68■□□□□ 0.9
ZNF541-205ENST00000595558 UHRF1BP1Q6BDS2 1440 aa20.68■□□□□ 0.9
ZNF541-205ENST00000595558 TRAPPC8Q9Y2L5 1435 aa20.68■□□□□ 0.9
ZNF541-205ENST00000595558 CCDC136Q96JN2 1154 aa20.68■□□□□ 0.9
ZNF541-205ENST00000595558 ROCK2O75116 1388 aaKnown RBP20.67■□□□□ 0.9
ZNF541-205ENST00000595558 ABCC2Q92887 1545 aa20.67■□□□□ 0.9
ZNF541-205ENST00000595558 RALGAPBQ86X10 1494 aa20.67■□□□□ 0.9
ZNF541-205ENST00000595558 PAK3O75914 559 aaPredicted RBP20.66■□□□□ 0.9
ZNF541-205ENST00000595558 SHROOM2Q13796 1616 aa20.66■□□□□ 0.9
ZNF541-205ENST00000595558 EFCAB2Q5VUJ9 269 aa20.65■□□□□ 0.9
ZNF541-205ENST00000595558 ARHGEF5Q12774 1597 aa20.65■□□□□ 0.9
ZNF541-205ENST00000595558 CCDC144AA2RUR9 1427 aa20.64■□□□□ 0.9
ZNF541-205ENST00000595558 SALL2Q9Y467 1007 aaPredicted RBP20.64■□□□□ 0.89
ZNF541-205ENST00000595558 ARID4BQ4LE39 1312 aaPredicted RBP20.64■□□□□ 0.89
ZNF541-205ENST00000595558 RSPH4AQ5TD94 716 aa20.63■□□□□ 0.89
ZNF541-205ENST00000595558 NOP58Q9Y2X3 529 aaKnown RBP20.59■□□□□ 0.89
ZNF541-205ENST00000595558 KDM5DQ9BY66 1539 aa20.59■□□□□ 0.89
ZNF541-205ENST00000595558 PLCH2O75038 1416 aa20.59■□□□□ 0.89
ZNF541-205ENST00000595558 ZCCHC11Q5TAX3 1644 aaKnown RBP20.58■□□□□ 0.88
ZNF541-205ENST00000595558 SPAG9O60271 1321 aaKnown RBP20.57■□□□□ 0.88
ZNF541-205ENST00000595558 NBR1Q14596 966 aa20.57■□□□□ 0.88
ZNF541-205ENST00000595558 LRPPRCP42704 1394 aaKnown RBP20.57■□□□□ 0.88
ZNF541-205ENST00000595558 MYBBP1AQ9BQG0 1328 aaKnown RBP20.55■□□□□ 0.88
ZNF541-205ENST00000595558 CC2D1BQ5T0F9 858 aaKnown RBP20.55■□□□□ 0.88
ZNF541-205ENST00000595558 A2MP01023 1474 aa20.54■□□□□ 0.88
ZNF541-205ENST00000595558 PRAG1Q86YV5 1406 aa20.53■□□□□ 0.88
ZNF541-205ENST00000595558 MYO5CQ9NQX4 1742 aa20.53■□□□□ 0.88
ZNF541-205ENST00000595558 CLASP1Q7Z460 1538 aa20.53■□□□□ 0.88
ZNF541-205ENST00000595558 EXOC6Q8TAG9 804 aa20.53■□□□□ 0.88
ZNF541-205ENST00000595558 BRD4O60885 1362 aaPredicted RBP20.52■□□□□ 0.88
ZNF541-205ENST00000595558 KIF3BO15066 747 aa20.52■□□□□ 0.87
ZNF541-205ENST00000595558 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.87
ZNF541-205ENST00000595558 DISP3Q9P2K9 1392 aa20.51■□□□□ 0.87
ZNF541-205ENST00000595558 DEKP35659 375 aaKnown RBP20.5■□□□□ 0.87
ZNF541-205ENST00000595558 RALBP1Q15311 655 aa20.5■□□□□ 0.87
ZNF541-205ENST00000595558 RRP1P56182 461 aaKnown RBP20.5■□□□□ 0.87
ZNF541-205ENST00000595558 TESK2Q96S53 571 aa20.49■□□□□ 0.87
ZNF541-205ENST00000595558 CDCA7LQ96GN5 454 aa20.48■□□□□ 0.87
ZNF541-205ENST00000595558 E9PCH4 1651 aa20.48■□□□□ 0.87
ZNF541-205ENST00000595558 SCAPERQ9BY12 1400 aa20.48■□□□□ 0.87
ZNF541-205ENST00000595558 RCAN3Q9UKA8 241 aa20.46■□□□□ 0.87
ZNF541-205ENST00000595558 IPO9Q96P70 1041 aaKnown RBP20.46■□□□□ 0.87
ZNF541-205ENST00000595558 PANK3Q9H999 370 aa20.46■□□□□ 0.87
ZNF541-205ENST00000595558 TRPM1Q7Z4N2 1603 aa20.45■□□□□ 0.86
ZNF541-205ENST00000595558 PER1O15534 1290 aaPredicted RBP20.45■□□□□ 0.86
ZNF541-205ENST00000595558 ANP32AP39687 249 aaKnown RBP20.45■□□□□ 0.86
ZNF541-205ENST00000595558 DUOX2Q9NRD8 1548 aa20.43■□□□□ 0.86
ZNF541-205ENST00000595558 NLRP13Q86W25 1043 aa20.43■□□□□ 0.86
ZNF541-205ENST00000595558 ABCC1P33527 1531 aa20.43■□□□□ 0.86
ZNF541-205ENST00000595558 PARD3Q8TEW0 1356 aa20.43■□□□□ 0.86
ZNF541-205ENST00000595558 PLIN1O60240 522 aa20.42■□□□□ 0.86
ZNF541-205ENST00000595558 UNC13BO14795 1591 aa20.42■□□□□ 0.86
ZNF541-205ENST00000595558 KTN1Q86UP2 1357 aaKnown RBP20.42■□□□□ 0.86
ZNF541-205ENST00000595558 MAST1Q9Y2H9 1570 aa20.41■□□□□ 0.86
ZNF541-205ENST00000595558 NPM2Q86SE8 214 aaKnown RBP20.41■□□□□ 0.86
ZNF541-205ENST00000595558 SKAP1Q86WV1 359 aa20.4■□□□□ 0.86
ZNF541-205ENST00000595558 FANCAO15360 1455 aa20.4■□□□□ 0.86
ZNF541-205ENST00000595558 UHRF1BP1LA0JNW5 1464 aa20.39■□□□□ 0.86
ZNF541-205ENST00000595558 ZBTB47Q9UFB7 747 aaPredicted RBP20.39■□□□□ 0.85
ZNF541-205ENST00000595558 PLXNC1O60486 1568 aa20.38■□□□□ 0.85
ZNF541-205ENST00000595558 ERBINQ96RT1 1412 aa20.38■□□□□ 0.85
ZNF541-205ENST00000595558 WDR7Q9Y4E6 1490 aa20.38■□□□□ 0.85
ZNF541-205ENST00000595558 IQGAP3Q86VI3 1631 aa20.37■□□□□ 0.85
ZNF541-205ENST00000595558 CHGAP10645 457 aaKnown RBP20.37■□□□□ 0.85
ZNF541-205ENST00000595558 ASXL2Q76L83 1435 aa20.37■□□□□ 0.85
ZNF541-205ENST00000595558 UGGT1Q9NYU2 1555 aa20.36■□□□□ 0.85
ZNF541-205ENST00000595558 GGT6Q6P531 493 aa20.36■□□□□ 0.85
ZNF541-205ENST00000595558 CFAP70Q5T0N1 1121 aa20.35■□□□□ 0.85
ZNF541-205ENST00000595558 NUTM2DQ5VT03 806 aaPredicted RBP20.35■□□□□ 0.85
ZNF541-205ENST00000595558 GPRASP1Q5JY77 1395 aa20.35■□□□□ 0.85
ZNF541-205ENST00000595558 ADGRL1O94910 1474 aa20.33■□□□□ 0.85
ZNF541-205ENST00000595558 COL17A1Q9UMD9 1497 aaPredicted RBP20.33■□□□□ 0.85
ZNF541-205ENST00000595558 ATP10AO60312 1499 aa20.33■□□□□ 0.84
ZNF541-205ENST00000595558 ZFYVE16Q7Z3T8 1539 aa20.33■□□□□ 0.84
ZNF541-205ENST00000595558 PDE4AP27815 886 aa20.32■□□□□ 0.84
ZNF541-205ENST00000595558 TMF1P82094 1093 aa20.32■□□□□ 0.84
ZNF541-205ENST00000595558 OSCARQ8IYS5 282 aa20.32■□□□□ 0.84
ZNF541-205ENST00000595558 RAPGEF3O95398 923 aa20.32■□□□□ 0.84
ZNF541-205ENST00000595558 PRDM15P57071 1507 aaPredicted RBP20.31■□□□□ 0.84
ZNF541-205ENST00000595558 ADGRF5Q8IZF2 1346 aa20.31■□□□□ 0.84
ZNF541-205ENST00000595558 MAGI2Q86UL8 1455 aa20.31■□□□□ 0.84
ZNF541-205ENST00000595558 PDE3BQ13370 1112 aa20.31■□□□□ 0.84
ZNF541-205ENST00000595558 NPM1P06748 294 aaKnown RBP eCLIP20.29■□□□□ 0.84
ZNF541-205ENST00000595558 TCERG1O14776 1098 aaKnown RBP20.29■□□□□ 0.84
ZNF541-205ENST00000595558 CRBNQ96SW2 442 aa20.29■□□□□ 0.84
ZNF541-205ENST00000595558 CFAP65Q6ZU64 1925 aaKnown RBP20.28■□□□□ 0.84
ZNF541-205ENST00000595558 C20orf194Q5TEA3 1177 aa20.28■□□□□ 0.84
ZNF541-205ENST00000595558 BACH2Q9BYV9 841 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms