RNA–Protein interactions for RNA: ENST00000594461.2

LINC00347-202, long intergenic non-protein coding RNA 347, humanhuman

TSL 1 (best) BASIC

Gene LINC00347, Length 2,371 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-202ENST00000594461 TRHP20396 242 aaPredicted RBP9.42□□□□□ -0.9
LINC00347-202ENST00000594461 BANK1Q8NDB2 785 aa9.42□□□□□ -0.9
LINC00347-202ENST00000594461 CCDC88BA6NC98 1476 aa9.41□□□□□ -0.9
LINC00347-202ENST00000594461 PEG3Q9GZU2 1588 aa9.4□□□□□ -0.9
LINC00347-202ENST00000594461 CDCA8Q53HL2 280 aa9.4□□□□□ -0.9
LINC00347-202ENST00000594461 LMOD3Q0VAK6 560 aa9.39□□□□□ -0.91
LINC00347-202ENST00000594461 MPNDQ8N594 471 aa9.39□□□□□ -0.91
LINC00347-202ENST00000594461 TMC1Q8TDI8 760 aa9.39□□□□□ -0.91
LINC00347-202ENST00000594461 NCAPD3P42695 1498 aa9.39□□□□□ -0.91
LINC00347-202ENST00000594461 FRAT2O75474 233 aaPredicted RBP9.38□□□□□ -0.91
LINC00347-202ENST00000594461 XRCC6P12956 609 aaKnown RBP eCLIP9.37□□□□□ -0.91
LINC00347-202ENST00000594461 EP400NLQ6ZTU2 488 aa9.37□□□□□ -0.91
LINC00347-202ENST00000594461 PLEKHD1A6NEE1 506 aa9.36□□□□□ -0.91
LINC00347-202ENST00000594461 ZNF500O60304 480 aaPredicted RBP9.36□□□□□ -0.91
LINC00347-202ENST00000594461 SATB1Q01826 763 aa9.36□□□□□ -0.91
LINC00347-202ENST00000594461 LOC102724159A0A0B4J2E5 919 aa9.36□□□□□ -0.91
LINC00347-202ENST00000594461 OFD1O75665 1012 aa9.36□□□□□ -0.91
LINC00347-202ENST00000594461 MAP2K1Q02750 393 aaPredicted RBP9.36□□□□□ -0.91
LINC00347-202ENST00000594461 PWP2Q15269 919 aaKnown RBP9.36□□□□□ -0.91
LINC00347-202ENST00000594461 NBPF9Q3BBW0 867 aa9.36□□□□□ -0.91
LINC00347-202ENST00000594461 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.36□□□□□ -0.91
LINC00347-202ENST00000594461 GOLIM4O00461 696 aa9.35□□□□□ -0.91
LINC00347-202ENST00000594461 KCNJ4P48050 445 aa9.35□□□□□ -0.91
LINC00347-202ENST00000594461 HMGXB3Q12766 1538 aa9.35□□□□□ -0.91
LINC00347-202ENST00000594461 ERBB4Q15303 1308 aa9.35□□□□□ -0.91
LINC00347-202ENST00000594461 DYNC1I1O14576 645 aa9.34□□□□□ -0.91
LINC00347-202ENST00000594461 ZBTB9Q96C00 473 aa9.34□□□□□ -0.91
LINC00347-202ENST00000594461 TSPYL1Q9H0U9 437 aa9.34□□□□□ -0.91
LINC00347-202ENST00000594461 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.34□□□□□ -0.91
LINC00347-202ENST00000594461 EFCC1Q9HA90 598 aa9.34□□□□□ -0.91
LINC00347-202ENST00000594461 RAI14Q9P0K7 980 aa9.34□□□□□ -0.91
LINC00347-202ENST00000594461 POGKQ9P215 609 aa9.34□□□□□ -0.91
LINC00347-202ENST00000594461 FSD2A1L4K1 749 aa9.32□□□□□ -0.92
LINC00347-202ENST00000594461 OTUD6BQ8N6M0 293 aa9.32□□□□□ -0.92
LINC00347-202ENST00000594461 CEP83Q9Y592 693 aa9.32□□□□□ -0.92
LINC00347-202ENST00000594461 CCDC27Q2M243 656 aa9.32□□□□□ -0.92
LINC00347-202ENST00000594461 FAM9BQ8IZU0 186 aa9.32□□□□□ -0.92
LINC00347-202ENST00000594461 RNF217Q8TC41 542 aa9.32□□□□□ -0.92
LINC00347-202ENST00000594461 TRIM6-TRIM34B2RNG4 842 aa9.31□□□□□ -0.92
LINC00347-202ENST00000594461 TRIM34Q9BYJ4 488 aa9.31□□□□□ -0.92
LINC00347-202ENST00000594461 NESP48681 1621 aa9.31□□□□□ -0.92
LINC00347-202ENST00000594461 RGL3Q3MIN7 710 aa9.31□□□□□ -0.92
LINC00347-202ENST00000594461 PDE4AP27815 886 aa9.3□□□□□ -0.92
LINC00347-202ENST00000594461 FAM50AQ14320 339 aaKnown RBP9.3□□□□□ -0.92
LINC00347-202ENST00000594461 CASC1Q6TDU7 716 aa9.3□□□□□ -0.92
LINC00347-202ENST00000594461 TERF2IPQ9NYB0 399 aa9.3□□□□□ -0.92
LINC00347-202ENST00000594461 CT47A1Q5JQC4 288 aaPredicted RBP9.3□□□□□ -0.92
LINC00347-202ENST00000594461 NBPF10Q6P3W6 841 aaKnown RBP9.3□□□□□ -0.92
LINC00347-202ENST00000594461 MYCBPQ99417 103 aaPredicted RBP9.3□□□□□ -0.92
LINC00347-202ENST00000594461 BACH2Q9BYV9 841 aa9.3□□□□□ -0.92
LINC00347-202ENST00000594461 PANK2Q9BZ23 570 aa9.3□□□□□ -0.92
LINC00347-202ENST00000594461 MYH16Q9H6N6 1097 aa9.3□□□□□ -0.92
LINC00347-202ENST00000594461 STK26Q9P289 416 aa9.3□□□□□ -0.92
LINC00347-202ENST00000594461 ZBED9Q6R2W3 1325 aa9.29□□□□□ -0.92
LINC00347-202ENST00000594461 SSR1P43307 286 aaKnown RBP9.29□□□□□ -0.92
LINC00347-202ENST00000594461 TMTC2Q8N394 836 aa9.29□□□□□ -0.92
LINC00347-202ENST00000594461 UQCRHLA0A096LP55 91 aa9.28□□□□□ -0.92
LINC00347-202ENST00000594461 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.28□□□□□ -0.92
LINC00347-202ENST00000594461 TULP2O00295 520 aa9.28□□□□□ -0.92
LINC00347-202ENST00000594461 UQCRHP07919 91 aa9.28□□□□□ -0.92
LINC00347-202ENST00000594461 CCDC172P0C7W6 258 aa9.28□□□□□ -0.92
LINC00347-202ENST00000594461 MRE11P49959 708 aa9.28□□□□□ -0.92
LINC00347-202ENST00000594461 BRPF1P55201 1214 aaPredicted RBP9.28□□□□□ -0.92
LINC00347-202ENST00000594461 NBPF6Q5VWK0 638 aa9.28□□□□□ -0.92
LINC00347-202ENST00000594461 NBPF5PQ86XG9 351 aaPredicted RBP9.28□□□□□ -0.92
LINC00347-202ENST00000594461 SIRT1Q96EB6 747 aa9.28□□□□□ -0.92
LINC00347-202ENST00000594461 NBPF4Q96M43 638 aa9.28□□□□□ -0.92
LINC00347-202ENST00000594461 CCDC66A2RUB6 948 aa9.27□□□□□ -0.93
LINC00347-202ENST00000594461 ARID4AP29374 1257 aaPredicted RBP9.27□□□□□ -0.93
LINC00347-202ENST00000594461 TIGD1Q96MW7 591 aa9.27□□□□□ -0.93
LINC00347-202ENST00000594461 MS4A1P11836 297 aa9.27□□□□□ -0.93
LINC00347-202ENST00000594461 CBX1P83916 185 aa9.27□□□□□ -0.93
LINC00347-202ENST00000594461 MLECQ14165 292 aa9.26□□□□□ -0.93
LINC00347-202ENST00000594461 NCAPGQ9BPX3 1015 aa9.26□□□□□ -0.93
LINC00347-202ENST00000594461 PLSCR2Q9NRY7 297 aa9.26□□□□□ -0.93
LINC00347-202ENST00000594461 SMC4Q9NTJ3 1288 aa9.26□□□□□ -0.93
LINC00347-202ENST00000594461 ABCC8Q09428 1581 aa9.26□□□□□ -0.93
LINC00347-202ENST00000594461 ZKSCAN8Q15776 578 aaPredicted RBP9.26□□□□□ -0.93
LINC00347-202ENST00000594461 BSDC1Q9NW68 430 aaPredicted RBP9.26□□□□□ -0.93
LINC00347-202ENST00000594461 ZBTB12Q9Y330 459 aaPredicted RBP9.26□□□□□ -0.93
LINC00347-202ENST00000594461 KIF3AQ9Y496 699 aa9.26□□□□□ -0.93
LINC00347-202ENST00000594461 CAPN2P17655 700 aa9.25□□□□□ -0.93
LINC00347-202ENST00000594461 HNRNPUQ00839 825 aaKnown RBP eCLIP9.25□□□□□ -0.93
LINC00347-202ENST00000594461 ZNF771Q7L3S4 317 aaPredicted RBP9.25□□□□□ -0.93
LINC00347-202ENST00000594461 RBM28Q9NW13 759 aaKnown RBP9.25□□□□□ -0.93
LINC00347-202ENST00000594461 R3HCC1Q9Y3T6 440 aaKnown RBP9.25□□□□□ -0.93
LINC00347-202ENST00000594461 CCDC96Q2M329 555 aa9.24□□□□□ -0.93
LINC00347-202ENST00000594461 ANP32CO43423 234 aa9.24□□□□□ -0.93
LINC00347-202ENST00000594461 ZNF513Q8N8E2 541 aaPredicted RBP9.24□□□□□ -0.93
LINC00347-202ENST00000594461 SGSM3Q96HU1 749 aa9.24□□□□□ -0.93
LINC00347-202ENST00000594461 HSP90AB4PQ58FF6 505 aa9.23□□□□□ -0.93
LINC00347-202ENST00000594461 ISY1Q9ULR0 285 aaKnown RBP9.22□□□□□ -0.93
LINC00347-202ENST00000594461 SLC4A3P48751 1232 aa9.22□□□□□ -0.93
LINC00347-202ENST00000594461 GTF2A1P52655 376 aaPredicted RBP9.22□□□□□ -0.93
LINC00347-202ENST00000594461 ZSCAN30Q86W11 494 aa9.22□□□□□ -0.93
LINC00347-202ENST00000594461 RINLQ6ZS11 566 aa9.21□□□□□ -0.93
LINC00347-202ENST00000594461 TSHZ1Q6ZSZ6 1077 aa9.21□□□□□ -0.93
LINC00347-202ENST00000594461 BORCS6Q96GS4 357 aa9.21□□□□□ -0.93
LINC00347-202ENST00000594461 KDM2AQ9Y2K7 1162 aa9.21□□□□□ -0.93
LINC00347-202ENST00000594461 TNNT3P45378 269 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms