RNA–Protein interactions for RNA: ENST00000593548.1

FARP1-208, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-208ENST00000593548 POTEEQ6S8J3 1075 aa12.3□□□□□ -0.44
FARP1-208ENST00000593548 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
FARP1-208ENST00000593548 BCL2L12Q9HB09 334 aa12.3□□□□□ -0.44
FARP1-208ENST00000593548 LSM11P83369 360 aaKnown RBP eCLIP12.26□□□□□ -0.45
FARP1-208ENST00000593548 EN1Q05925 392 aaPredicted RBP12.26□□□□□ -0.45
FARP1-208ENST00000593548 DMRTA1Q5VZB9 504 aa12.25□□□□□ -0.45
FARP1-208ENST00000593548 OSBPP22059 807 aa12.24□□□□□ -0.45
FARP1-208ENST00000593548 C6orf132Q5T0Z8 1188 aa12.24□□□□□ -0.45
FARP1-208ENST00000593548 TSR1Q2NL82 804 aaKnown RBP12.23□□□□□ -0.45
FARP1-208ENST00000593548 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
FARP1-208ENST00000593548 SMYD5Q6GMV2 418 aa12.21□□□□□ -0.45
FARP1-208ENST00000593548 TESPA1A2RU30 521 aaPredicted RBP12.2□□□□□ -0.46
FARP1-208ENST00000593548 PPP1R3GB7ZBB8 358 aa12.19□□□□□ -0.46
FARP1-208ENST00000593548 COL9A1P20849 921 aa12.19□□□□□ -0.46
FARP1-208ENST00000593548 TULP1O00294 542 aaPredicted RBP12.17□□□□□ -0.46
FARP1-208ENST00000593548 ADGRD1Q6QNK2 874 aa12.17□□□□□ -0.46
FARP1-208ENST00000593548 CDHR5Q9HBB8 845 aa12.17□□□□□ -0.46
FARP1-208ENST00000593548 NUTM2FA1L443 756 aa12.16□□□□□ -0.46
FARP1-208ENST00000593548 STAC3Q96MF2 364 aa12.15□□□□□ -0.46
FARP1-208ENST00000593548 PROX2Q3B8N5 592 aa12.14□□□□□ -0.47
FARP1-208ENST00000593548 RBM26Q5T8P6 1007 aaKnown RBP12.14□□□□□ -0.47
FARP1-208ENST00000593548 ZBED2Q9BTP6 218 aa12.14□□□□□ -0.47
FARP1-208ENST00000593548 SPNS2Q8IVW8 549 aa12.13□□□□□ -0.47
FARP1-208ENST00000593548 VPS9D1Q9Y2B5 631 aa12.13□□□□□ -0.47
FARP1-208ENST00000593548 TK2O00142 265 aa12.12□□□□□ -0.47
FARP1-208ENST00000593548 MMRN1Q13201 1228 aa12.11□□□□□ -0.47
FARP1-208ENST00000593548 CERKQ8TCT0 537 aa12.09□□□□□ -0.47
FARP1-208ENST00000593548 SLC4A5Q9BY07 1137 aa12.08□□□□□ -0.48
FARP1-208ENST00000593548 CDCA7LQ96GN5 454 aa12.07□□□□□ -0.48
FARP1-208ENST00000593548 TRIM6-TRIM34B2RNG4 842 aa12.06□□□□□ -0.48
FARP1-208ENST00000593548 MYT1LQ9UL68 1186 aa12.06□□□□□ -0.48
FARP1-208ENST00000593548 PRSS12P56730 875 aa12.05□□□□□ -0.48
FARP1-208ENST00000593548 NBPF3Q9H094 633 aa12.05□□□□□ -0.48
FARP1-208ENST00000593548 KIAA1468Q9P260 1216 aa12.05□□□□□ -0.48
FARP1-208ENST00000593548 GPIHBP1Q8IV16 184 aa12.04□□□□□ -0.48
FARP1-208ENST00000593548 RABGEF1Q9UJ41 708 aa12.04□□□□□ -0.48
FARP1-208ENST00000593548 HRO43593 1189 aa12.03□□□□□ -0.48
FARP1-208ENST00000593548 FCHSD2O94868 740 aa12.03□□□□□ -0.48
FARP1-208ENST00000593548 PTGDRQ13258 359 aa12.03□□□□□ -0.48
FARP1-208ENST00000593548 PACS2Q86VP3 889 aa12.03□□□□□ -0.48
FARP1-208ENST00000593548 MRPL50Q8N5N7 158 aaKnown RBP12.03□□□□□ -0.48
FARP1-208ENST00000593548 NPDC1Q9NQX5 325 aaPredicted RBP12.03□□□□□ -0.48
FARP1-208ENST00000593548 TSKSQ9UJT2 592 aa12.03□□□□□ -0.48
FARP1-208ENST00000593548 GOLGA8CPA6NN73 597 aa12.02□□□□□ -0.49
FARP1-208ENST00000593548 PADI6Q6TGC4 694 aa12.02□□□□□ -0.49
FARP1-208ENST00000593548 SEPT9Q9UHD8 586 aaPredicted RBP12.01□□□□□ -0.49
FARP1-208ENST00000593548 BCANQ96GW7 911 aa12□□□□□ -0.49
FARP1-208ENST00000593548 LMOD2Q6P5Q4 547 aa11.99□□□□□ -0.49
FARP1-208ENST00000593548 RNF166Q96A37 237 aaPredicted RBP11.99□□□□□ -0.49
FARP1-208ENST00000593548 BHMG1C9JSJ3 638 aaPredicted RBP11.98□□□□□ -0.49
FARP1-208ENST00000593548 ONECUT3O60422 494 aaPredicted RBP11.98□□□□□ -0.49
FARP1-208ENST00000593548 PNMA3Q9UL41 463 aa11.98□□□□□ -0.49
FARP1-208ENST00000593548 NBPF26B4DH59 902 aa11.97□□□□□ -0.49
FARP1-208ENST00000593548 SMAPO00193 183 aa11.97□□□□□ -0.49
FARP1-208ENST00000593548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.97□□□□□ -0.49
FARP1-208ENST00000593548 FAM198AQ9UFP1 575 aa11.97□□□□□ -0.49
FARP1-208ENST00000593548 KCTD12Q96CX2 325 aaKnown RBP11.96□□□□□ -0.49
FARP1-208ENST00000593548 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.49
FARP1-208ENST00000593548 HIC1Q14526 733 aa11.95□□□□□ -0.5
FARP1-208ENST00000593548 NUDT18Q6ZVK8 323 aa11.94□□□□□ -0.5
FARP1-208ENST00000593548 TATDN2Q93075 761 aa11.94□□□□□ -0.5
FARP1-208ENST00000593548 GNPATO15228 680 aa11.93□□□□□ -0.5
FARP1-208ENST00000593548 WNT2BQ93097 391 aa11.92□□□□□ -0.5
FARP1-208ENST00000593548 C3orf80F5H4A9 247 aa11.91□□□□□ -0.5
FARP1-208ENST00000593548 GPR37O15354 613 aa11.91□□□□□ -0.5
FARP1-208ENST00000593548 FAM98CQ17RN3 349 aaKnown RBP11.91□□□□□ -0.5
FARP1-208ENST00000593548 FAM161AQ3B820 660 aa11.91□□□□□ -0.5
FARP1-208ENST00000593548 LAPTM4BQ86VI4 370 aa11.91□□□□□ -0.5
FARP1-208ENST00000593548 FECHP22830 423 aa11.9□□□□□ -0.5
FARP1-208ENST00000593548 TTC13Q8NBP0 860 aa11.9□□□□□ -0.5
FARP1-208ENST00000593548 ZFRQ96KR1 1074 aaKnown RBP11.9□□□□□ -0.5
FARP1-208ENST00000593548 ANKK1Q8NFD2 765 aa11.89□□□□□ -0.51
FARP1-208ENST00000593548 PTPN5P54829 565 aa11.86□□□□□ -0.51
FARP1-208ENST00000593548 RBM46Q8TBY0 533 aaKnown RBP11.86□□□□□ -0.51
FARP1-208ENST00000593548 ADGRG1Q9Y653 693 aa11.86□□□□□ -0.51
FARP1-208ENST00000593548 RNF40O75150 1001 aa11.85□□□□□ -0.51
FARP1-208ENST00000593548 HDGFP51858 240 aaKnown RBP11.85□□□□□ -0.51
FARP1-208ENST00000593548 BCAMP50895 628 aa11.84□□□□□ -0.51
FARP1-208ENST00000593548 SAMD7Q7Z3H4 446 aa11.83□□□□□ -0.52
FARP1-208ENST00000593548 LRCH3Q96II8 777 aa11.83□□□□□ -0.52
FARP1-208ENST00000593548 THSD4Q6ZMP0 1018 aa11.82□□□□□ -0.52
FARP1-208ENST00000593548 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.82□□□□□ -0.52
FARP1-208ENST00000593548 OATP04181 439 aa11.81□□□□□ -0.52
FARP1-208ENST00000593548 KRI1Q8N9T8 703 aaKnown RBP11.81□□□□□ -0.52
FARP1-208ENST00000593548 ZC3H15Q8WU90 426 aaKnown RBP11.81□□□□□ -0.52
FARP1-208ENST00000593548 EYA1Q99502 592 aa11.81□□□□□ -0.52
FARP1-208ENST00000593548 HCSTQ9UBK5 93 aa11.8□□□□□ -0.52
FARP1-208ENST00000593548 SOWAHBA6NEL2 793 aa11.79□□□□□ -0.52
FARP1-208ENST00000593548 MAP2K5Q13163 448 aa11.79□□□□□ -0.52
FARP1-208ENST00000593548 RCCD1A6NED2 376 aa11.78□□□□□ -0.52
FARP1-208ENST00000593548 DNAJB2P25686 324 aa11.78□□□□□ -0.52
FARP1-208ENST00000593548 SWT1Q5T5J6 900 aaKnown RBP11.78□□□□□ -0.52
FARP1-208ENST00000593548 HPS5Q9UPZ3 1129 aa11.78□□□□□ -0.52
FARP1-208ENST00000593548 METTL3Q86U44 580 aaKnown RBP11.77□□□□□ -0.53
FARP1-208ENST00000593548 PXYLP1Q8TE99 480 aa11.77□□□□□ -0.53
FARP1-208ENST00000593548 SLC4A3P48751 1232 aa11.76□□□□□ -0.53
FARP1-208ENST00000593548 NLRP7Q8WX94 980 aa11.75□□□□□ -0.53
FARP1-208ENST00000593548 IRF6O14896 467 aa11.74□□□□□ -0.53
FARP1-208ENST00000593548 PPP4CP60510 307 aa11.74□□□□□ -0.53
FARP1-208ENST00000593548 MINK1Q8N4C8 1332 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms