RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 DPYSL4O14531 572 aa9.2□□□□□ -0.94
LINC01539-206ENST00000593282 BHMG1C9JSJ3 638 aaPredicted RBP9.19□□□□□ -0.94
LINC01539-206ENST00000593282 THSD4Q6ZMP0 1018 aa9.19□□□□□ -0.94
LINC01539-206ENST00000593282 SPRYD3Q8NCJ5 442 aa9.19□□□□□ -0.94
LINC01539-206ENST00000593282 CAMK2BQ13554 666 aa9.17□□□□□ -0.94
LINC01539-206ENST00000593282 EPAS1Q99814 870 aa9.17□□□□□ -0.94
LINC01539-206ENST00000593282 PROX2Q3B8N5 592 aa9.16□□□□□ -0.94
LINC01539-206ENST00000593282 COL9A1P20849 921 aa9.15□□□□□ -0.94
LINC01539-206ENST00000593282 RBM33Q96EV2 1170 aaKnown RBP9.15□□□□□ -0.94
LINC01539-206ENST00000593282 RABGEF1Q9UJ41 708 aa9.15□□□□□ -0.94
LINC01539-206ENST00000593282 ANKK1Q8NFD2 765 aa9.14□□□□□ -0.95
LINC01539-206ENST00000593282 DDX12PQ92771 950 aa9.14□□□□□ -0.95
LINC01539-206ENST00000593282 CFAP44Q96MT7 982 aa9.14□□□□□ -0.95
LINC01539-206ENST00000593282 HAP1P54257 671 aaPredicted RBP9.13□□□□□ -0.95
LINC01539-206ENST00000593282 C6orf132Q5T0Z8 1188 aa9.12□□□□□ -0.95
LINC01539-206ENST00000593282 NBR1Q14596 966 aa9.11□□□□□ -0.95
LINC01539-206ENST00000593282 PAXIP1Q6ZW49 1069 aaPredicted RBP9.11□□□□□ -0.95
LINC01539-206ENST00000593282 WDR70Q9NW82 654 aa9.11□□□□□ -0.95
LINC01539-206ENST00000593282 KIAA1468Q9P260 1216 aa9.11□□□□□ -0.95
LINC01539-206ENST00000593282 MAP3K7O43318 606 aa9.09□□□□□ -0.95
LINC01539-206ENST00000593282 LAPTM4BQ86VI4 370 aa9.09□□□□□ -0.95
LINC01539-206ENST00000593282 SEPT9Q9UHD8 586 aaPredicted RBP9.08□□□□□ -0.96
LINC01539-206ENST00000593282 TRIM6-TRIM34B2RNG4 842 aa9.07□□□□□ -0.96
LINC01539-206ENST00000593282 BCAMP50895 628 aa9.07□□□□□ -0.96
LINC01539-206ENST00000593282 SPDYE16A6NNV3 312 aaPredicted RBP9.06□□□□□ -0.96
LINC01539-206ENST00000593282 ONECUT3O60422 494 aaPredicted RBP9.06□□□□□ -0.96
LINC01539-206ENST00000593282 PDIA6Q15084 440 aa9.06□□□□□ -0.96
LINC01539-206ENST00000593282 E2F4Q16254 413 aa9.06□□□□□ -0.96
LINC01539-206ENST00000593282 ZFRQ96KR1 1074 aaKnown RBP9.06□□□□□ -0.96
LINC01539-206ENST00000593282 EN1Q05925 392 aaPredicted RBP9.05□□□□□ -0.96
LINC01539-206ENST00000593282 SOWAHBA6NEL2 793 aa9.04□□□□□ -0.96
LINC01539-206ENST00000593282 IFFO2Q5TF58 517 aa9.03□□□□□ -0.96
LINC01539-206ENST00000593282 GRXCR2A6NFK2 248 aa9.02□□□□□ -0.97
LINC01539-206ENST00000593282 PRKCSHP14314 528 aaPredicted RBP9.02□□□□□ -0.97
LINC01539-206ENST00000593282 FAM98CQ17RN3 349 aaKnown RBP9.02□□□□□ -0.97
LINC01539-206ENST00000593282 TSR1Q2NL82 804 aaKnown RBP9.02□□□□□ -0.97
LINC01539-206ENST00000593282 PACS2Q86VP3 889 aa9.02□□□□□ -0.97
LINC01539-206ENST00000593282 BCANQ96GW7 911 aa9.02□□□□□ -0.97
LINC01539-206ENST00000593282 A0A0G2JS52 829 aa9.01□□□□□ -0.97
LINC01539-206ENST00000593282 LRCH3Q96II8 777 aa9.01□□□□□ -0.97
LINC01539-206ENST00000593282 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.01□□□□□ -0.97
LINC01539-206ENST00000593282 NYAP1Q6ZVC0 841 aa9□□□□□ -0.97
LINC01539-206ENST00000593282 WBP1LQ9NX94 342 aa8.99□□□□□ -0.97
LINC01539-206ENST00000593282 RGS20O76081 388 aa8.98□□□□□ -0.97
LINC01539-206ENST00000593282 HPS5Q9UPZ3 1129 aa8.98□□□□□ -0.97
LINC01539-206ENST00000593282 TSR3Q9UJK0 312 aaKnown RBP8.97□□□□□ -0.97
LINC01539-206ENST00000593282 TSKSQ9UJT2 592 aa8.97□□□□□ -0.97
LINC01539-206ENST00000593282 CERKQ8TCT0 537 aa8.96□□□□□ -0.98
LINC01539-206ENST00000593282 CDCA7LQ96GN5 454 aa8.96□□□□□ -0.98
LINC01539-206ENST00000593282 ITGBL1O95965 494 aaPredicted RBP8.95□□□□□ -0.98
LINC01539-206ENST00000593282 VSIG10Q8N0Z9 540 aa8.95□□□□□ -0.98
LINC01539-206ENST00000593282 NBPF26B4DH59 902 aa8.94□□□□□ -0.98
LINC01539-206ENST00000593282 PRSS12P56730 875 aa8.94□□□□□ -0.98
LINC01539-206ENST00000593282 KCNC4Q03721 635 aa8.94□□□□□ -0.98
LINC01539-206ENST00000593282 ARIH1Q9Y4X5 557 aaPredicted RBP8.94□□□□□ -0.98
LINC01539-206ENST00000593282 SMAPO00193 183 aa8.93□□□□□ -0.98
LINC01539-206ENST00000593282 PPP4CP60510 307 aa8.93□□□□□ -0.98
LINC01539-206ENST00000593282 IRX2Q9BZI1 471 aaPredicted RBP8.93□□□□□ -0.98
LINC01539-206ENST00000593282 PNMA3Q9UL41 463 aa8.93□□□□□ -0.98
LINC01539-206ENST00000593282 RNF40O75150 1001 aa8.92□□□□□ -0.98
LINC01539-206ENST00000593282 KDM2AQ9Y2K7 1162 aa8.92□□□□□ -0.98
LINC01539-206ENST00000593282 HDGFP51858 240 aaKnown RBP8.91□□□□□ -0.98
LINC01539-206ENST00000593282 TSHZ2Q9NRE2 1034 aa8.91□□□□□ -0.98
LINC01539-206ENST00000593282 PRIM1P49642 420 aaKnown RBP8.9□□□□□ -0.98
LINC01539-206ENST00000593282 SAMD7Q7Z3H4 446 aa8.9□□□□□ -0.98
LINC01539-206ENST00000593282 CDHR5Q9HBB8 845 aa8.9□□□□□ -0.98
LINC01539-206ENST00000593282 OSBPP22059 807 aa8.89□□□□□ -0.99
LINC01539-206ENST00000593282 TATDN2Q93075 761 aa8.89□□□□□ -0.99
LINC01539-206ENST00000593282 FAM198AQ9UFP1 575 aa8.88□□□□□ -0.99
LINC01539-206ENST00000593282 NUDT18Q6ZVK8 323 aa8.87□□□□□ -0.99
LINC01539-206ENST00000593282 RBM27Q9P2N5 1060 aaKnown RBP8.86□□□□□ -0.99
LINC01539-206ENST00000593282 SLC4A3P48751 1232 aa8.83□□□□□ -1
LINC01539-206ENST00000593282 PADI6Q6TGC4 694 aa8.83□□□□□ -1
LINC01539-206ENST00000593282 C3orf80F5H4A9 247 aa8.82□□□□□ -1
LINC01539-206ENST00000593282 NECTIN2Q92692 538 aa8.82□□□□□ -1
LINC01539-206ENST00000593282 ARHGEF1Q92888 912 aaKnown RBP8.81□□□□□ -1
LINC01539-206ENST00000593282 MTRQ99707 1265 aa8.8□□□□□ -1
LINC01539-206ENST00000593282 IL21Q9HBE4 155 aa8.8□□□□□ -1
LINC01539-206ENST00000593282 TPRNQ4KMQ1 711 aa8.79□□□□□ -1
LINC01539-206ENST00000593282 SLF2Q8IX21 1173 aa8.79□□□□□ -1
LINC01539-206ENST00000593282 KCNV2Q8TDN2 545 aa8.79□□□□□ -1
LINC01539-206ENST00000593282 MLLT3P42568 568 aaPredicted RBP8.78□□□□□ -1
LINC01539-206ENST00000593282 TJAP1Q5JTD0 557 aa8.78□□□□□ -1
LINC01539-206ENST00000593282 SWT1Q5T5J6 900 aaKnown RBP8.78□□□□□ -1
LINC01539-206ENST00000593282 Q6ZNB5 142 aa8.77□□□□□ -1.01
LINC01539-206ENST00000593282 NPDC1Q9NQX5 325 aaPredicted RBP8.77□□□□□ -1.01
LINC01539-206ENST00000593282 APLP1P51693 650 aa8.75□□□□□ -1.01
LINC01539-206ENST00000593282 P3H3Q8IVL6 736 aa8.75□□□□□ -1.01
LINC01539-206ENST00000593282 TTC13Q8NBP0 860 aa8.75□□□□□ -1.01
LINC01539-206ENST00000593282 NUTM2FA1L443 756 aa8.73□□□□□ -1.01
LINC01539-206ENST00000593282 COPS2P61201 443 aa8.73□□□□□ -1.01
LINC01539-206ENST00000593282 PPP1R18Q6NYC8 613 aa8.72□□□□□ -1.01
LINC01539-206ENST00000593282 ZNF516Q92618 1163 aa8.72□□□□□ -1.01
LINC01539-206ENST00000593282 PRR14Q9BWN1 585 aa8.72□□□□□ -1.01
LINC01539-206ENST00000593282 GGCXP38435 758 aa8.71□□□□□ -1.02
LINC01539-206ENST00000593282 RBM46Q8TBY0 533 aaKnown RBP8.71□□□□□ -1.02
LINC01539-206ENST00000593282 EYA1Q99502 592 aa8.71□□□□□ -1.02
LINC01539-206ENST00000593282 PRKD2Q9BZL6 878 aa8.71□□□□□ -1.02
LINC01539-206ENST00000593282 DNAJB2P25686 324 aa8.7□□□□□ -1.02
LINC01539-206ENST00000593282 PTGDRQ13258 359 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms