RNA–Protein interactions for RNA: ENST00000592442.1

LAMA3-213, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-213ENST00000592442 EPAS1Q99814 870 aa8.55□□□□□ -1.04
LAMA3-213ENST00000592442 PCDHGA10Q9Y5H3 936 aa8.55□□□□□ -1.04
LAMA3-213ENST00000592442 ATAD2BQ9ULI0 1458 aa8.55□□□□□ -1.04
LAMA3-213ENST00000592442 FBXW7Q969H0 707 aa8.54□□□□□ -1.04
LAMA3-213ENST00000592442 ZDHHC16Q969W1 377 aa8.54□□□□□ -1.04
LAMA3-213ENST00000592442 KCNH8Q96L42 1107 aa8.54□□□□□ -1.04
LAMA3-213ENST00000592442 HS3ST6Q96QI5 342 aa8.54□□□□□ -1.04
LAMA3-213ENST00000592442 NCAPD3P42695 1498 aa8.53□□□□□ -1.04
LAMA3-213ENST00000592442 BAZ1BQ9UIG0 1483 aaKnown RBP8.52□□□□□ -1.05
LAMA3-213ENST00000592442 NUTM2FA1L443 756 aa8.51□□□□□ -1.05
LAMA3-213ENST00000592442 OSBPP22059 807 aa8.51□□□□□ -1.05
LAMA3-213ENST00000592442 RSF1Q96T23 1441 aaPredicted RBP8.51□□□□□ -1.05
LAMA3-213ENST00000592442 EN1Q05925 392 aaPredicted RBP8.5□□□□□ -1.05
LAMA3-213ENST00000592442 RBM26Q5T8P6 1007 aaKnown RBP8.5□□□□□ -1.05
LAMA3-213ENST00000592442 ADAM33Q9BZ11 813 aa8.5□□□□□ -1.05
LAMA3-213ENST00000592442 POTEMA6NI47 508 aa8.49□□□□□ -1.05
LAMA3-213ENST00000592442 PTPREP23469 700 aa8.49□□□□□ -1.05
LAMA3-213ENST00000592442 LMOD2Q6P5Q4 547 aa8.49□□□□□ -1.05
LAMA3-213ENST00000592442 POTEGQ6S5H5 508 aa8.49□□□□□ -1.05
LAMA3-213ENST00000592442 KCNK17Q96T54 332 aa8.49□□□□□ -1.05
LAMA3-213ENST00000592442 SUPT5HO00267 1087 aaKnown RBP8.48□□□□□ -1.05
LAMA3-213ENST00000592442 HMGXB3Q12766 1538 aa8.48□□□□□ -1.05
LAMA3-213ENST00000592442 PEG3Q9GZU2 1588 aa8.48□□□□□ -1.05
LAMA3-213ENST00000592442 TSR1Q2NL82 804 aaKnown RBP8.47□□□□□ -1.05
LAMA3-213ENST00000592442 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.47□□□□□ -1.05
LAMA3-213ENST00000592442 GPIHBP1Q8IV16 184 aa8.47□□□□□ -1.05
LAMA3-213ENST00000592442 BCL2L12Q9HB09 334 aa8.47□□□□□ -1.05
LAMA3-213ENST00000592442 WIZO95785 1651 aa8.46□□□□□ -1.05
LAMA3-213ENST00000592442 PRIM1P49642 420 aaKnown RBP8.46□□□□□ -1.06
LAMA3-213ENST00000592442 C6orf132Q5T0Z8 1188 aa8.46□□□□□ -1.06
LAMA3-213ENST00000592442 ZNF687Q8N1G0 1237 aa8.46□□□□□ -1.06
LAMA3-213ENST00000592442 AXIN2Q9Y2T1 843 aa8.46□□□□□ -1.06
LAMA3-213ENST00000592442 POTEB3A0JP26 581 aa8.45□□□□□ -1.06
LAMA3-213ENST00000592442 POTEBQ6S5H4 581 aa8.45□□□□□ -1.06
LAMA3-213ENST00000592442 ARHGAP33O14559 1287 aa8.44□□□□□ -1.06
LAMA3-213ENST00000592442 PBX2P40425 430 aa8.44□□□□□ -1.06
LAMA3-213ENST00000592442 PSEN2P49810 448 aa8.44□□□□□ -1.06
LAMA3-213ENST00000592442 CDHR5Q9HBB8 845 aa8.44□□□□□ -1.06
LAMA3-213ENST00000592442 CUX2O14529 1486 aa8.42□□□□□ -1.06
LAMA3-213ENST00000592442 PPP1R3GB7ZBB8 358 aa8.41□□□□□ -1.06
LAMA3-213ENST00000592442 FCHSD2O94868 740 aa8.41□□□□□ -1.06
LAMA3-213ENST00000592442 CDAN1Q8IWY9 1227 aa8.41□□□□□ -1.06
LAMA3-213ENST00000592442 TOP2AP11388 1531 aaKnown RBP8.4□□□□□ -1.06
LAMA3-213ENST00000592442 CERKQ8TCT0 537 aa8.4□□□□□ -1.06
LAMA3-213ENST00000592442 COL9A1P20849 921 aa8.39□□□□□ -1.07
LAMA3-213ENST00000592442 ANKRD13DQ6ZTN6 518 aa8.39□□□□□ -1.07
LAMA3-213ENST00000592442 PTGDRQ13258 359 aa8.38□□□□□ -1.07
LAMA3-213ENST00000592442 DMRTA1Q5VZB9 504 aa8.38□□□□□ -1.07
LAMA3-213ENST00000592442 POTEEQ6S8J3 1075 aa8.38□□□□□ -1.07
LAMA3-213ENST00000592442 LSM11P83369 360 aaKnown RBP eCLIP8.36□□□□□ -1.07
LAMA3-213ENST00000592442 HIC1Q14526 733 aa8.36□□□□□ -1.07
LAMA3-213ENST00000592442 PROX2Q3B8N5 592 aa8.36□□□□□ -1.07
LAMA3-213ENST00000592442 CDCA7LQ96GN5 454 aa8.36□□□□□ -1.07
LAMA3-213ENST00000592442 GNPATO15228 680 aa8.35□□□□□ -1.07
LAMA3-213ENST00000592442 PRSS12P56730 875 aa8.35□□□□□ -1.07
LAMA3-213ENST00000592442 TPRNQ4KMQ1 711 aa8.35□□□□□ -1.07
LAMA3-213ENST00000592442 PADI6Q6TGC4 694 aa8.35□□□□□ -1.07
LAMA3-213ENST00000592442 ZC3H15Q8WU90 426 aaKnown RBP8.35□□□□□ -1.07
LAMA3-213ENST00000592442 STAC3Q96MF2 364 aa8.35□□□□□ -1.07
LAMA3-213ENST00000592442 NPDC1Q9NQX5 325 aaPredicted RBP8.35□□□□□ -1.07
LAMA3-213ENST00000592442 KRI1Q8N9T8 703 aaKnown RBP8.34□□□□□ -1.07
LAMA3-213ENST00000592442 ZBED2Q9BTP6 218 aa8.34□□□□□ -1.07
LAMA3-213ENST00000592442 CADPSQ9ULU8 1353 aa8.33□□□□□ -1.08
LAMA3-213ENST00000592442 ERCC6Q03468 1493 aa8.32□□□□□ -1.08
LAMA3-213ENST00000592442 TRIM6-TRIM34B2RNG4 842 aa8.32□□□□□ -1.08
LAMA3-213ENST00000592442 ADGRD1Q6QNK2 874 aa8.32□□□□□ -1.08
LAMA3-213ENST00000592442 PACS2Q86VP3 889 aa8.32□□□□□ -1.08
LAMA3-213ENST00000592442 KRTAP3-3Q9BYR6 98 aa8.32□□□□□ -1.08
LAMA3-213ENST00000592442 KRTAP3-2Q9BYR7 98 aa8.32□□□□□ -1.08
LAMA3-213ENST00000592442 CCDC88BA6NC98 1476 aa8.32□□□□□ -1.08
LAMA3-213ENST00000592442 GPR37O15354 613 aa8.31□□□□□ -1.08
LAMA3-213ENST00000592442 KIAA1468Q9P260 1216 aa8.31□□□□□ -1.08
LAMA3-213ENST00000592442 RBM27Q9P2N5 1060 aaKnown RBP8.31□□□□□ -1.08
LAMA3-213ENST00000592442 VPS9D1Q9Y2B5 631 aa8.31□□□□□ -1.08
LAMA3-213ENST00000592442 PDS5BQ9NTI5 1447 aa8.3□□□□□ -1.08
LAMA3-213ENST00000592442 NBPF26B4DH59 902 aa8.3□□□□□ -1.08
LAMA3-213ENST00000592442 FECHP22830 423 aa8.3□□□□□ -1.08
LAMA3-213ENST00000592442 NBPF3Q9H094 633 aa8.3□□□□□ -1.08
LAMA3-213ENST00000592442 TSKSQ9UJT2 592 aa8.3□□□□□ -1.08
LAMA3-213ENST00000592442 LAMC3Q9Y6N6 1575 aa8.3□□□□□ -1.08
LAMA3-213ENST00000592442 TK2O00142 265 aa8.29□□□□□ -1.08
LAMA3-213ENST00000592442 SLC4A5Q9BY07 1137 aa8.29□□□□□ -1.08
LAMA3-213ENST00000592442 RABGEF1Q9UJ41 708 aa8.29□□□□□ -1.08
LAMA3-213ENST00000592442 NESP48681 1621 aa8.29□□□□□ -1.08
LAMA3-213ENST00000592442 ZMYND10O75800 440 aa8.28□□□□□ -1.08
LAMA3-213ENST00000592442 FAM161AQ3B820 660 aa8.28□□□□□ -1.08
LAMA3-213ENST00000592442 MRPL50Q8N5N7 158 aaKnown RBP8.28□□□□□ -1.08
LAMA3-213ENST00000592442 PCDH10Q9P2E7 1040 aa8.28□□□□□ -1.08
LAMA3-213ENST00000592442 PNMA3Q9UL41 463 aa8.28□□□□□ -1.08
LAMA3-213ENST00000592442 SMAPO00193 183 aa8.27□□□□□ -1.09
LAMA3-213ENST00000592442 MAP2K5Q13163 448 aa8.27□□□□□ -1.09
LAMA3-213ENST00000592442 BARGINQ6ZT62 677 aa8.27□□□□□ -1.09
LAMA3-213ENST00000592442 NUDT18Q6ZVK8 323 aa8.27□□□□□ -1.09
LAMA3-213ENST00000592442 SEPT9Q9UHD8 586 aaPredicted RBP8.27□□□□□ -1.09
LAMA3-213ENST00000592442 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
LAMA3-213ENST00000592442 ONECUT3O60422 494 aaPredicted RBP8.26□□□□□ -1.09
LAMA3-213ENST00000592442 RBM46Q8TBY0 533 aaKnown RBP8.26□□□□□ -1.09
LAMA3-213ENST00000592442 TATDN2Q93075 761 aa8.26□□□□□ -1.09
LAMA3-213ENST00000592442 FAM198AQ9UFP1 575 aa8.26□□□□□ -1.09
LAMA3-213ENST00000592442 CFTRP13569 1480 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms