RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 PROX2Q3B8N5 592 aa9.72□□□□□ -0.85
NPC1-213ENST00000591955 COL9A1P20849 921 aa9.71□□□□□ -0.86
NPC1-213ENST00000591955 BCAMP50895 628 aa9.71□□□□□ -0.86
NPC1-213ENST00000591955 PCDHGA10Q9Y5H3 936 aa9.71□□□□□ -0.86
NPC1-213ENST00000591955 MAP3K9P80192 1104 aa9.7□□□□□ -0.86
NPC1-213ENST00000591955 NYAP1Q6ZVC0 841 aa9.7□□□□□ -0.86
NPC1-213ENST00000591955 LAPTM4BQ86VI4 370 aa9.7□□□□□ -0.86
NPC1-213ENST00000591955 SOWAHBA6NEL2 793 aa9.69□□□□□ -0.86
NPC1-213ENST00000591955 DDX27Q96GQ7 796 aaKnown RBP9.69□□□□□ -0.86
NPC1-213ENST00000591955 LARP6Q9BRS8 491 aaKnown RBP9.69□□□□□ -0.86
NPC1-213ENST00000591955 MFSD10Q14728 455 aa9.68□□□□□ -0.86
NPC1-213ENST00000591955 Q6ZNB5 142 aa9.68□□□□□ -0.86
NPC1-213ENST00000591955 FBXW7Q969H0 707 aa9.67□□□□□ -0.86
NPC1-213ENST00000591955 EMILIN3Q9NT22 766 aa9.67□□□□□ -0.86
NPC1-213ENST00000591955 TYW1BQ6NUM6 668 aa9.66□□□□□ -0.86
NPC1-213ENST00000591955 ZFRQ96KR1 1074 aaKnown RBP9.66□□□□□ -0.86
NPC1-213ENST00000591955 ONECUT3O60422 494 aaPredicted RBP9.65□□□□□ -0.86
NPC1-213ENST00000591955 WBP1LQ9NX94 342 aa9.65□□□□□ -0.86
NPC1-213ENST00000591955 PHF14O94880 888 aa9.64□□□□□ -0.87
NPC1-213ENST00000591955 KCNC4Q03721 635 aa9.64□□□□□ -0.87
NPC1-213ENST00000591955 KIAA1468Q9P260 1216 aa9.64□□□□□ -0.87
NPC1-213ENST00000591955 CC2D2AQ9P2K1 1620 aa9.64□□□□□ -0.87
NPC1-213ENST00000591955 GTPBP6O43824 516 aaPredicted RBP9.62□□□□□ -0.87
NPC1-213ENST00000591955 CECR2Q9BXF3 1484 aa9.61□□□□□ -0.87
NPC1-213ENST00000591955 DCAF8L2P0C7V8 631 aa9.6□□□□□ -0.87
NPC1-213ENST00000591955 LCE2BO14633 110 aa9.59□□□□□ -0.87
NPC1-213ENST00000591955 LAPTM4AQ15012 233 aa9.59□□□□□ -0.87
NPC1-213ENST00000591955 SEPT9Q9UHD8 586 aaPredicted RBP9.59□□□□□ -0.87
NPC1-213ENST00000591955 C6orf132Q5T0Z8 1188 aa9.58□□□□□ -0.88
NPC1-213ENST00000591955 TTBK1Q5TCY1 1321 aaPredicted RBP9.57□□□□□ -0.88
NPC1-213ENST00000591955 TRIM6-TRIM34B2RNG4 842 aa9.57□□□□□ -0.88
NPC1-213ENST00000591955 FAM98CQ17RN3 349 aaKnown RBP9.57□□□□□ -0.88
NPC1-213ENST00000591955 EPAS1Q99814 870 aa9.57□□□□□ -0.88
NPC1-213ENST00000591955 TSR3Q9UJK0 312 aaKnown RBP9.57□□□□□ -0.88
NPC1-213ENST00000591955 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.55□□□□□ -0.88
NPC1-213ENST00000591955 HPS5Q9UPZ3 1129 aa9.54□□□□□ -0.88
NPC1-213ENST00000591955 LRCH3Q96II8 777 aa9.53□□□□□ -0.88
NPC1-213ENST00000591955 TRAF7Q6Q0C0 670 aa9.52□□□□□ -0.89
NPC1-213ENST00000591955 GFRA3O60609 400 aa9.51□□□□□ -0.89
NPC1-213ENST00000591955 CAMK2BQ13554 666 aa9.51□□□□□ -0.89
NPC1-213ENST00000591955 EIF4G1Q04637 1599 aaKnown RBP9.5□□□□□ -0.89
NPC1-213ENST00000591955 CADPS2Q86UW7 1296 aa9.5□□□□□ -0.89
NPC1-213ENST00000591955 TJAP1Q5JTD0 557 aa9.48□□□□□ -0.89
NPC1-213ENST00000591955 DPYSL4O14531 572 aa9.47□□□□□ -0.89
NPC1-213ENST00000591955 RBM33Q96EV2 1170 aaKnown RBP9.47□□□□□ -0.89
NPC1-213ENST00000591955 TSKSQ9UJT2 592 aa9.46□□□□□ -0.9
NPC1-213ENST00000591955 SCRIBQ14160 1630 aa9.45□□□□□ -0.9
NPC1-213ENST00000591955 NRG2O14511 850 aaPredicted RBP9.45□□□□□ -0.9
NPC1-213ENST00000591955 PPP4CP60510 307 aa9.45□□□□□ -0.9
NPC1-213ENST00000591955 PRKD2Q9BZL6 878 aa9.45□□□□□ -0.9
NPC1-213ENST00000591955 ZEB1P37275 1124 aaPredicted RBP9.44□□□□□ -0.9
NPC1-213ENST00000591955 PACS2Q86VP3 889 aa9.44□□□□□ -0.9
NPC1-213ENST00000591955 MYO15BQ96JP2 1530 aa9.43□□□□□ -0.9
NPC1-213ENST00000591955 DDX12PQ92771 950 aa9.43□□□□□ -0.9
NPC1-213ENST00000591955 EN1Q05925 392 aaPredicted RBP9.42□□□□□ -0.9
NPC1-213ENST00000591955 V9GY48 417 aaPredicted RBP9.42□□□□□ -0.9
NPC1-213ENST00000591955 SHROOM4Q9ULL8 1493 aa9.41□□□□□ -0.9
NPC1-213ENST00000591955 TSR1Q2NL82 804 aaKnown RBP9.41□□□□□ -0.9
NPC1-213ENST00000591955 PPP1R18Q6NYC8 613 aa9.4□□□□□ -0.9
NPC1-213ENST00000591955 SAMD7Q7Z3H4 446 aa9.4□□□□□ -0.9
NPC1-213ENST00000591955 MTRQ99707 1265 aa9.4□□□□□ -0.9
NPC1-213ENST00000591955 IL21Q9HBE4 155 aa9.4□□□□□ -0.9
NPC1-213ENST00000591955 DCAF1Q9Y4B6 1507 aa9.4□□□□□ -0.91
NPC1-213ENST00000591955 MAP3K7O43318 606 aa9.38□□□□□ -0.91
NPC1-213ENST00000591955 NBR1Q14596 966 aa9.38□□□□□ -0.91
NPC1-213ENST00000591955 SMAPO00193 183 aa9.37□□□□□ -0.91
NPC1-213ENST00000591955 CDCA7LQ96GN5 454 aa9.37□□□□□ -0.91
NPC1-213ENST00000591955 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
NPC1-213ENST00000591955 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.36□□□□□ -0.91
NPC1-213ENST00000591955 PRSS12P56730 875 aa9.35□□□□□ -0.91
NPC1-213ENST00000591955 PDIA6Q15084 440 aa9.35□□□□□ -0.91
NPC1-213ENST00000591955 ZNF516Q92618 1163 aa9.35□□□□□ -0.91
NPC1-213ENST00000591955 C3orf80F5H4A9 247 aa9.34□□□□□ -0.91
NPC1-213ENST00000591955 ZNF787Q6DD87 383 aa9.33□□□□□ -0.92
NPC1-213ENST00000591955 CERKQ8TCT0 537 aa9.32□□□□□ -0.92
NPC1-213ENST00000591955 TATDN2Q93075 761 aa9.32□□□□□ -0.92
NPC1-213ENST00000591955 PDZRN3Q9UPQ7 1066 aa9.32□□□□□ -0.92
NPC1-213ENST00000591955 NBPF26B4DH59 902 aa9.31□□□□□ -0.92
NPC1-213ENST00000591955 SPDYE16A6NNV3 312 aaPredicted RBP9.3□□□□□ -0.92
NPC1-213ENST00000591955 PRIM1P49642 420 aaKnown RBP9.3□□□□□ -0.92
NPC1-213ENST00000591955 APLP1P51693 650 aa9.3□□□□□ -0.92
NPC1-213ENST00000591955 ZCCHC6Q5VYS8 1495 aaKnown RBP9.29□□□□□ -0.92
NPC1-213ENST00000591955 NKX2-3Q8TAU0 364 aa9.29□□□□□ -0.92
NPC1-213ENST00000591955 PNMA3Q9UL41 463 aa9.29□□□□□ -0.92
NPC1-213ENST00000591955 ZNF775Q96BV0 537 aaPredicted RBP9.27□□□□□ -0.93
NPC1-213ENST00000591955 CUX2O14529 1486 aa9.26□□□□□ -0.93
NPC1-213ENST00000591955 GGCXP38435 758 aa9.25□□□□□ -0.93
NPC1-213ENST00000591955 NUDT18Q6ZVK8 323 aa9.25□□□□□ -0.93
NPC1-213ENST00000591955 TMUB1Q9BVT8 246 aa9.25□□□□□ -0.93
NPC1-213ENST00000591955 RBM27Q9P2N5 1060 aaKnown RBP9.25□□□□□ -0.93
NPC1-213ENST00000591955 RNF40O75150 1001 aa9.24□□□□□ -0.93
NPC1-213ENST00000591955 HDGFP51858 240 aaKnown RBP9.24□□□□□ -0.93
NPC1-213ENST00000591955 NECTIN2Q92692 538 aa9.23□□□□□ -0.93
NPC1-213ENST00000591955 TRIM67Q6ZTA4 783 aa9.22□□□□□ -0.93
NPC1-213ENST00000591955 PCGF6Q9BYE7 350 aa9.22□□□□□ -0.93
NPC1-213ENST00000591955 COPS2P61201 443 aa9.21□□□□□ -0.94
NPC1-213ENST00000591955 TTC13Q8NBP0 860 aa9.21□□□□□ -0.94
NPC1-213ENST00000591955 CDHR5Q9HBB8 845 aa9.21□□□□□ -0.94
NPC1-213ENST00000591955 GRXCR2A6NFK2 248 aa9.2□□□□□ -0.94
NPC1-213ENST00000591955 ARIH1Q9Y4X5 557 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms