RNA–Protein interactions for RNA: ENST00000591762.1

SPHK1-209, Transcript of sphingosine kinase 1, humanhuman

TSL 2

Gene SPHK1, Length 2,502 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-209ENST00000591762 RGL3Q3MIN7 710 aa24.4■■□□□ 1.5
SPHK1-209ENST00000591762 IRX6P78412 446 aaPredicted RBP24.4■■□□□ 1.5
SPHK1-209ENST00000591762 NPM1P06748 294 aaKnown RBP eCLIP24.39■■□□□ 1.5
SPHK1-209ENST00000591762 MYT1LQ9UL68 1186 aa24.39■■□□□ 1.5
SPHK1-209ENST00000591762 FANCAO15360 1455 aa24.38■■□□□ 1.49
SPHK1-209ENST00000591762 UNC13BO14795 1591 aa24.38■■□□□ 1.49
SPHK1-209ENST00000591762 KIF7Q2M1P5 1343 aa24.38■■□□□ 1.49
SPHK1-209ENST00000591762 USP47Q96K76 1375 aa24.37■■□□□ 1.49
SPHK1-209ENST00000591762 CCDC144AA2RUR9 1427 aa24.37■■□□□ 1.49
SPHK1-209ENST00000591762 ERBINQ96RT1 1412 aa24.36■■□□□ 1.49
SPHK1-209ENST00000591762 POLR3GLQ9BT43 218 aa24.35■■□□□ 1.49
SPHK1-209ENST00000591762 PLA2R1Q13018 1463 aa24.35■■□□□ 1.49
SPHK1-209ENST00000591762 CARD11Q9BXL7 1154 aa24.35■■□□□ 1.49
SPHK1-209ENST00000591762 CNTLNQ9NXG0 1405 aa24.33■■□□□ 1.49
SPHK1-209ENST00000591762 ARAP3Q8WWN8 1544 aa24.33■■□□□ 1.49
SPHK1-209ENST00000591762 UHRF1BP1Q6BDS2 1440 aa24.33■■□□□ 1.49
SPHK1-209ENST00000591762 SCAPERQ9BY12 1400 aa24.32■■□□□ 1.48
SPHK1-209ENST00000591762 ABCA9Q8IUA7 1624 aa24.31■■□□□ 1.48
SPHK1-209ENST00000591762 IQGAP3Q86VI3 1631 aa24.3■■□□□ 1.48
SPHK1-209ENST00000591762 ADGRL1O94910 1474 aa24.29■■□□□ 1.48
SPHK1-209ENST00000591762 RTEL1-TNFRSF6BF6WH68 1400 aa24.28■■□□□ 1.48
SPHK1-209ENST00000591762 ZFYVE16Q7Z3T8 1539 aa24.28■■□□□ 1.48
SPHK1-209ENST00000591762 CCDC184Q52MB2 194 aa24.28■■□□□ 1.48
SPHK1-209ENST00000591762 RALGAPBQ86X10 1494 aa24.27■■□□□ 1.48
SPHK1-209ENST00000591762 MAGI2Q86UL8 1455 aa24.26■■□□□ 1.47
SPHK1-209ENST00000591762 CNGB1Q14028 1251 aaPredicted RBP24.25■■□□□ 1.47
SPHK1-209ENST00000591762 KDM5CP41229 1560 aa24.24■■□□□ 1.47
SPHK1-209ENST00000591762 ST20-MTHFSA0A0A6YYL1 179 aa24.24■■□□□ 1.47
SPHK1-209ENST00000591762 KIF3BO15066 747 aa24.24■■□□□ 1.47
SPHK1-209ENST00000591762 ROCK2O75116 1388 aaKnown RBP24.23■■□□□ 1.47
SPHK1-209ENST00000591762 BCORL1Q5H9F3 1711 aa24.23■■□□□ 1.47
SPHK1-209ENST00000591762 PRKRIP1Q9H875 184 aaPredicted RBP24.22■■□□□ 1.47
SPHK1-209ENST00000591762 ATP7AQ04656 1500 aa24.22■■□□□ 1.47
SPHK1-209ENST00000591762 NBPF1Q3BBV0 1214 aa24.21■■□□□ 1.47
SPHK1-209ENST00000591762 FAM9BQ8IZU0 186 aa24.2■■□□□ 1.46
SPHK1-209ENST00000591762 A2MP01023 1474 aa24.19■■□□□ 1.46
SPHK1-209ENST00000591762 PRAG1Q86YV5 1406 aa24.18■■□□□ 1.46
SPHK1-209ENST00000591762 CD109Q6YHK3 1445 aa24.18■■□□□ 1.46
SPHK1-209ENST00000591762 MSH5O43196 834 aa24.17■■□□□ 1.46
SPHK1-209ENST00000591762 INO80Q9ULG1 1556 aaPredicted RBP24.16■■□□□ 1.46
SPHK1-209ENST00000591762 POLR1AO95602 1720 aaPredicted RBP24.16■■□□□ 1.46
SPHK1-209ENST00000591762 MRS2Q9HD23 443 aa24.15■■□□□ 1.46
SPHK1-209ENST00000591762 ATP10AO60312 1499 aa24.15■■□□□ 1.46
SPHK1-209ENST00000591762 DHX29Q7Z478 1369 aaKnown RBP24.14■■□□□ 1.45
SPHK1-209ENST00000591762 E9PCH4 1651 aa24.12■■□□□ 1.45
SPHK1-209ENST00000591762 CYB5RLQ6IPT4 315 aa24.12■■□□□ 1.45
SPHK1-209ENST00000591762 KANK1Q14678 1352 aa24.11■■□□□ 1.45
SPHK1-209ENST00000591762 TRPM1Q7Z4N2 1603 aa24.09■■□□□ 1.45
SPHK1-209ENST00000591762 ARID4BQ4LE39 1312 aaPredicted RBP24.08■■□□□ 1.45
SPHK1-209ENST00000591762 ZNF518AQ6AHZ1 1483 aa24.08■■□□□ 1.44
SPHK1-209ENST00000591762 DEPDC5O75140 1603 aa24.07■■□□□ 1.44
SPHK1-209ENST00000591762 PPP4R2Q9NY27 417 aa24.07■■□□□ 1.44
SPHK1-209ENST00000591762 KIDINS220Q9ULH0 1771 aa24.06■■□□□ 1.44
SPHK1-209ENST00000591762 RAPGEF3O95398 923 aa24.05■■□□□ 1.44
SPHK1-209ENST00000591762 FANCIQ9NVI1 1328 aa24.04■■□□□ 1.44
SPHK1-209ENST00000591762 ZBED9Q6R2W3 1325 aa24.03■■□□□ 1.44
SPHK1-209ENST00000591762 PRKCSHP14314 528 aaPredicted RBP24.03■■□□□ 1.44
SPHK1-209ENST00000591762 PTPRTO14522 1441 aa24.02■■□□□ 1.44
SPHK1-209ENST00000591762 ERICH6BQ5W0A0 696 aa24.02■■□□□ 1.44
SPHK1-209ENST00000591762 B4GALNT3Q6L9W6 998 aa24.02■■□□□ 1.44
SPHK1-209ENST00000591762 TRPM2O94759 1503 aa24.01■■□□□ 1.43
SPHK1-209ENST00000591762 POGZQ7Z3K3 1410 aa24.01■■□□□ 1.43
SPHK1-209ENST00000591762 GPRASP1Q5JY77 1395 aa24.01■■□□□ 1.43
SPHK1-209ENST00000591762 GGT6Q6P531 493 aa24.01■■□□□ 1.43
SPHK1-209ENST00000591762 TET3O43151 1660 aa24■■□□□ 1.43
SPHK1-209ENST00000591762 VWDEQ8N2E2 1590 aa24■■□□□ 1.43
SPHK1-209ENST00000591762 MROH1Q8NDA8 1641 aa23.99■■□□□ 1.43
SPHK1-209ENST00000591762 SPHKAPQ2M3C7 1700 aa23.99■■□□□ 1.43
SPHK1-209ENST00000591762 CLTCL1P53675 1640 aa23.99■■□□□ 1.43
SPHK1-209ENST00000591762 ERICH6Q7L0X2 663 aa23.98■■□□□ 1.43
SPHK1-209ENST00000591762 PRDM15P57071 1507 aaPredicted RBP23.97■■□□□ 1.43
SPHK1-209ENST00000591762 EIF2AK4Q9P2K8 1649 aaKnown RBP23.97■■□□□ 1.43
SPHK1-209ENST00000591762 TESK2Q96S53 571 aa23.95■■□□□ 1.43
SPHK1-209ENST00000591762 UGGT1Q9NYU2 1555 aa23.95■■□□□ 1.42
SPHK1-209ENST00000591762 CFAP74Q9C0B2 1584 aa23.95■■□□□ 1.42
SPHK1-209ENST00000591762 MLH3Q9UHC1 1453 aa23.93■■□□□ 1.42
SPHK1-209ENST00000591762 DISP3Q9P2K9 1392 aa23.92■■□□□ 1.42
SPHK1-209ENST00000591762 CEP152O94986 1710 aa23.91■■□□□ 1.42
SPHK1-209ENST00000591762 FRMPD1Q5SYB0 1578 aa23.89■■□□□ 1.42
SPHK1-209ENST00000591762 HECW2Q9P2P5 1572 aa23.89■■□□□ 1.42
SPHK1-209ENST00000591762 CHGAP10645 457 aaKnown RBP23.89■■□□□ 1.41
SPHK1-209ENST00000591762 NEO1Q92859 1461 aa23.88■■□□□ 1.41
SPHK1-209ENST00000591762 SENP3-EIF4A1A0A087X0R7 540 aa23.88■■□□□ 1.41
SPHK1-209ENST00000591762 MADDQ8WXG6 1647 aa23.88■■□□□ 1.41
SPHK1-209ENST00000591762 EFCAB6Q5THR3 1501 aa23.88■■□□□ 1.41
SPHK1-209ENST00000591762 PPRC1Q5VV67 1664 aaKnown RBP23.87■■□□□ 1.41
SPHK1-209ENST00000591762 WASHC2CQ9Y4E1 1318 aa23.87■■□□□ 1.41
SPHK1-209ENST00000591762 LAMC1P11047 1609 aa23.87■■□□□ 1.41
SPHK1-209ENST00000591762 TMF1P82094 1093 aa23.86■■□□□ 1.41
SPHK1-209ENST00000591762 FAM69CQ0P6D2 419 aa23.85■■□□□ 1.41
SPHK1-209ENST00000591762 ABCA6Q8N139 1617 aa23.85■■□□□ 1.41
SPHK1-209ENST00000591762 COL17A1Q9UMD9 1497 aaPredicted RBP23.85■■□□□ 1.41
SPHK1-209ENST00000591762 ADGRF5Q8IZF2 1346 aa23.84■■□□□ 1.41
SPHK1-209ENST00000591762 TMC1Q8TDI8 760 aa23.84■■□□□ 1.41
SPHK1-209ENST00000591762 CFAP65Q6ZU64 1925 aaKnown RBP23.84■■□□□ 1.41
SPHK1-209ENST00000591762 RIMBP3CA6NJZ7 1639 aa23.83■■□□□ 1.41
SPHK1-209ENST00000591762 RIMBP3BA6NNM3 1639 aa23.83■■□□□ 1.41
SPHK1-209ENST00000591762 RIMBP3Q9UFD9 1639 aa23.83■■□□□ 1.41
SPHK1-209ENST00000591762 CFAP70Q5T0N1 1121 aa23.83■■□□□ 1.41
SPHK1-209ENST00000591762 STAC3Q96MF2 364 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms