RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 GOLGA8CPA6NN73 597 aa9.93□□□□□ -0.82
TPM4-214ENST00000591645 DPYSL4O14531 572 aa9.93□□□□□ -0.82
TPM4-214ENST00000591645 THSD4Q6ZMP0 1018 aa9.93□□□□□ -0.82
TPM4-214ENST00000591645 MRPL50Q8N5N7 158 aaKnown RBP9.93□□□□□ -0.82
TPM4-214ENST00000591645 WNT2BQ93097 391 aa9.92□□□□□ -0.82
TPM4-214ENST00000591645 COL9A1P20849 921 aa9.91□□□□□ -0.82
TPM4-214ENST00000591645 PDIA6Q15084 440 aa9.9□□□□□ -0.82
TPM4-214ENST00000591645 PROX2Q3B8N5 592 aa9.9□□□□□ -0.82
TPM4-214ENST00000591645 SPDYE16A6NNV3 312 aaPredicted RBP9.89□□□□□ -0.83
TPM4-214ENST00000591645 PPP1R3GB7ZBB8 358 aa9.88□□□□□ -0.83
TPM4-214ENST00000591645 NBPF3Q9H094 633 aa9.88□□□□□ -0.83
TPM4-214ENST00000591645 PHF14O94880 888 aa9.87□□□□□ -0.83
TPM4-214ENST00000591645 TYW1BQ6NUM6 668 aa9.87□□□□□ -0.83
TPM4-214ENST00000591645 FBXW7Q969H0 707 aa9.85□□□□□ -0.83
TPM4-214ENST00000591645 RABGEF1Q9UJ41 708 aa9.84□□□□□ -0.83
TPM4-214ENST00000591645 EPAS1Q99814 870 aa9.83□□□□□ -0.84
TPM4-214ENST00000591645 C6orf132Q5T0Z8 1188 aa9.81□□□□□ -0.84
TPM4-214ENST00000591645 ARHGEF1Q92888 912 aaKnown RBP9.81□□□□□ -0.84
TPM4-214ENST00000591645 KIAA1468Q9P260 1216 aa9.81□□□□□ -0.84
TPM4-214ENST00000591645 IFFO2Q5TF58 517 aa9.8□□□□□ -0.84
TPM4-214ENST00000591645 P3H3Q8IVL6 736 aa9.8□□□□□ -0.84
TPM4-214ENST00000591645 KCNV2Q8TDN2 545 aa9.8□□□□□ -0.84
TPM4-214ENST00000591645 RBM33Q96EV2 1170 aaKnown RBP9.8□□□□□ -0.84
TPM4-214ENST00000591645 BCAMP50895 628 aa9.79□□□□□ -0.84
TPM4-214ENST00000591645 HAP1P54257 671 aaPredicted RBP9.79□□□□□ -0.84
TPM4-214ENST00000591645 ANKK1Q8NFD2 765 aa9.79□□□□□ -0.84
TPM4-214ENST00000591645 DDX12PQ92771 950 aa9.79□□□□□ -0.84
TPM4-214ENST00000591645 SEPT9Q9UHD8 586 aaPredicted RBP9.77□□□□□ -0.85
TPM4-214ENST00000591645 A0A0G2JS52 829 aa9.76□□□□□ -0.85
TPM4-214ENST00000591645 LAPTM4BQ86VI4 370 aa9.76□□□□□ -0.85
TPM4-214ENST00000591645 ZFRQ96KR1 1074 aaKnown RBP9.76□□□□□ -0.85
TPM4-214ENST00000591645 SOWAHBA6NEL2 793 aa9.75□□□□□ -0.85
TPM4-214ENST00000591645 TRIM6-TRIM34B2RNG4 842 aa9.74□□□□□ -0.85
TPM4-214ENST00000591645 ONECUT3O60422 494 aaPredicted RBP9.74□□□□□ -0.85
TPM4-214ENST00000591645 EN1Q05925 392 aaPredicted RBP9.74□□□□□ -0.85
TPM4-214ENST00000591645 NBR1Q14596 966 aa9.74□□□□□ -0.85
TPM4-214ENST00000591645 TSR1Q2NL82 804 aaKnown RBP9.72□□□□□ -0.85
TPM4-214ENST00000591645 WBP1LQ9NX94 342 aa9.72□□□□□ -0.85
TPM4-214ENST00000591645 RGS20O76081 388 aa9.71□□□□□ -0.86
TPM4-214ENST00000591645 VSIG10Q8N0Z9 540 aa9.71□□□□□ -0.86
TPM4-214ENST00000591645 KDM2AQ9Y2K7 1162 aa9.7□□□□□ -0.86
TPM4-214ENST00000591645 MAP3K7O43318 606 aa9.69□□□□□ -0.86
TPM4-214ENST00000591645 ITGBL1O95965 494 aaPredicted RBP9.69□□□□□ -0.86
TPM4-214ENST00000591645 OSBPP22059 807 aa9.69□□□□□ -0.86
TPM4-214ENST00000591645 FAM98CQ17RN3 349 aaKnown RBP9.69□□□□□ -0.86
TPM4-214ENST00000591645 GRXCR2A6NFK2 248 aa9.68□□□□□ -0.86
TPM4-214ENST00000591645 TSKSQ9UJT2 592 aa9.68□□□□□ -0.86
TPM4-214ENST00000591645 PRIM1P49642 420 aaKnown RBP9.67□□□□□ -0.86
TPM4-214ENST00000591645 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.66□□□□□ -0.86
TPM4-214ENST00000591645 NYAP1Q6ZVC0 841 aa9.65□□□□□ -0.86
TPM4-214ENST00000591645 IRX2Q9BZI1 471 aaPredicted RBP9.65□□□□□ -0.86
TPM4-214ENST00000591645 HPS5Q9UPZ3 1129 aa9.65□□□□□ -0.86
TPM4-214ENST00000591645 PACS2Q86VP3 889 aa9.64□□□□□ -0.87
TPM4-214ENST00000591645 CERKQ8TCT0 537 aa9.64□□□□□ -0.87
TPM4-214ENST00000591645 LRCH3Q96II8 777 aa9.64□□□□□ -0.87
TPM4-214ENST00000591645 TSR3Q9UJK0 312 aaKnown RBP9.64□□□□□ -0.87
TPM4-214ENST00000591645 SMAPO00193 183 aa9.63□□□□□ -0.87
TPM4-214ENST00000591645 MLLT3P42568 568 aaPredicted RBP9.63□□□□□ -0.87
TPM4-214ENST00000591645 FAM198AQ9UFP1 575 aa9.63□□□□□ -0.87
TPM4-214ENST00000591645 KCNC4Q03721 635 aa9.62□□□□□ -0.87
TPM4-214ENST00000591645 CDCA7LQ96GN5 454 aa9.62□□□□□ -0.87
TPM4-214ENST00000591645 C3orf80F5H4A9 247 aa9.61□□□□□ -0.87
TPM4-214ENST00000591645 PRSS12P56730 875 aa9.6□□□□□ -0.87
TPM4-214ENST00000591645 RBM27Q9P2N5 1060 aaKnown RBP9.6□□□□□ -0.87
TPM4-214ENST00000591645 SEMA3EO15041 775 aa9.59□□□□□ -0.87
TPM4-214ENST00000591645 CDHR5Q9HBB8 845 aa9.59□□□□□ -0.87
TPM4-214ENST00000591645 TESPA1A2RU30 521 aaPredicted RBP9.58□□□□□ -0.88
TPM4-214ENST00000591645 PPP4CP60510 307 aa9.58□□□□□ -0.88
TPM4-214ENST00000591645 SAMD7Q7Z3H4 446 aa9.58□□□□□ -0.88
TPM4-214ENST00000591645 TATDN2Q93075 761 aa9.56□□□□□ -0.88
TPM4-214ENST00000591645 NPDC1Q9NQX5 325 aaPredicted RBP9.56□□□□□ -0.88
TPM4-214ENST00000591645 PNMA3Q9UL41 463 aa9.55□□□□□ -0.88
TPM4-214ENST00000591645 TTC13Q8NBP0 860 aa9.54□□□□□ -0.88
TPM4-214ENST00000591645 SMYD5Q6GMV2 418 aa9.53□□□□□ -0.88
TPM4-214ENST00000591645 NBPF26B4DH59 902 aa9.52□□□□□ -0.89
TPM4-214ENST00000591645 TJAP1Q5JTD0 557 aa9.52□□□□□ -0.89
TPM4-214ENST00000591645 NUDT18Q6ZVK8 323 aa9.52□□□□□ -0.89
TPM4-214ENST00000591645 PTGDRQ13258 359 aa9.51□□□□□ -0.89
TPM4-214ENST00000591645 RNF40O75150 1001 aa9.48□□□□□ -0.89
TPM4-214ENST00000591645 PADI6Q6TGC4 694 aa9.48□□□□□ -0.89
TPM4-214ENST00000591645 MTRQ99707 1265 aa9.48□□□□□ -0.89
TPM4-214ENST00000591645 FCHSD2O94868 740 aa9.47□□□□□ -0.89
TPM4-214ENST00000591645 NUTM2FA1L443 756 aa9.46□□□□□ -0.9
TPM4-214ENST00000591645 Q6ZNB5 142 aa9.46□□□□□ -0.9
TPM4-214ENST00000591645 APLP1P51693 650 aa9.45□□□□□ -0.9
TPM4-214ENST00000591645 HDGFP51858 240 aaKnown RBP9.45□□□□□ -0.9
TPM4-214ENST00000591645 ZNF516Q92618 1163 aa9.45□□□□□ -0.9
TPM4-214ENST00000591645 IL21Q9HBE4 155 aa9.45□□□□□ -0.9
TPM4-214ENST00000591645 RBM26Q5T8P6 1007 aaKnown RBP9.44□□□□□ -0.9
TPM4-214ENST00000591645 SWT1Q5T5J6 900 aaKnown RBP9.43□□□□□ -0.9
TPM4-214ENST00000591645 PPP1R18Q6NYC8 613 aa9.43□□□□□ -0.9
TPM4-214ENST00000591645 GPR37O15354 613 aa9.42□□□□□ -0.9
TPM4-214ENST00000591645 HIC1Q14526 733 aa9.42□□□□□ -0.9
TPM4-214ENST00000591645 EYA1Q99502 592 aa9.41□□□□□ -0.9
TPM4-214ENST00000591645 PRKD2Q9BZL6 878 aa9.41□□□□□ -0.9
TPM4-214ENST00000591645 TULP1O00294 542 aaPredicted RBP9.4□□□□□ -0.9
TPM4-214ENST00000591645 GFRA3O60609 400 aa9.4□□□□□ -0.9
TPM4-214ENST00000591645 NKX2-3Q8TAU0 364 aa9.4□□□□□ -0.9
TPM4-214ENST00000591645 ADGRG1Q9Y653 693 aa9.39□□□□□ -0.91
TPM4-214ENST00000591645 COPS2P61201 443 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms