RNA–Protein interactions for RNA: ENST00000591327.2

GFAP-218, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 3,255 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-218ENST00000591327 B4GALNT3Q6L9W6 998 aa16.6■□□□□ 0.25
GFAP-218ENST00000591327 SYCP2Q9BX26 1530 aa16.59■□□□□ 0.25
GFAP-218ENST00000591327 KDM5CP41229 1560 aa16.59■□□□□ 0.25
GFAP-218ENST00000591327 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
GFAP-218ENST00000591327 NPM2Q86SE8 214 aaKnown RBP16.58■□□□□ 0.25
GFAP-218ENST00000591327 UHRF1BP1Q6BDS2 1440 aa16.58■□□□□ 0.25
GFAP-218ENST00000591327 ARHGAP5Q13017 1502 aa16.58■□□□□ 0.24
GFAP-218ENST00000591327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.58■□□□□ 0.24
GFAP-218ENST00000591327 DCAF11Q8TEB1 546 aa16.57■□□□□ 0.24
GFAP-218ENST00000591327 DHX29Q7Z478 1369 aaKnown RBP16.57■□□□□ 0.24
GFAP-218ENST00000591327 CARD11Q9BXL7 1154 aa16.57■□□□□ 0.24
GFAP-218ENST00000591327 RALGAPBQ86X10 1494 aa16.56■□□□□ 0.24
GFAP-218ENST00000591327 FAM135AQ9P2D6 1515 aa16.56■□□□□ 0.24
GFAP-218ENST00000591327 NOP58Q9Y2X3 529 aaKnown RBP16.55■□□□□ 0.24
GFAP-218ENST00000591327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.24
GFAP-218ENST00000591327 ARHGEF12Q9NZN5 1544 aa16.54■□□□□ 0.24
GFAP-218ENST00000591327 ABCC2Q92887 1545 aa16.54■□□□□ 0.24
GFAP-218ENST00000591327 RSPH4AQ5TD94 716 aa16.54■□□□□ 0.24
GFAP-218ENST00000591327 LAS1LQ9Y4W2 734 aaKnown RBP16.53■□□□□ 0.24
GFAP-218ENST00000591327 ST20-MTHFSA0A0A6YYL1 179 aa16.52■□□□□ 0.23
GFAP-218ENST00000591327 FANCIQ9NVI1 1328 aa16.52■□□□□ 0.23
GFAP-218ENST00000591327 RGL3Q3MIN7 710 aa16.5■□□□□ 0.23
GFAP-218ENST00000591327 PLEKHH2Q8IVE3 1493 aa16.49■□□□□ 0.23
GFAP-218ENST00000591327 ZBED9Q6R2W3 1325 aa16.49■□□□□ 0.23
GFAP-218ENST00000591327 MYO5CQ9NQX4 1742 aa16.49■□□□□ 0.23
GFAP-218ENST00000591327 PLA2R1Q13018 1463 aa16.48■□□□□ 0.23
GFAP-218ENST00000591327 MAST1Q9Y2H9 1570 aa16.48■□□□□ 0.23
GFAP-218ENST00000591327 CCDC144AA2RUR9 1427 aa16.48■□□□□ 0.23
GFAP-218ENST00000591327 ARID4BQ4LE39 1312 aaPredicted RBP16.48■□□□□ 0.23
GFAP-218ENST00000591327 ROCK2O75116 1388 aaKnown RBP16.48■□□□□ 0.23
GFAP-218ENST00000591327 UNC13BO14795 1591 aa16.46■□□□□ 0.23
GFAP-218ENST00000591327 UBE2Q2Q8WVN8 375 aa16.46■□□□□ 0.23
GFAP-218ENST00000591327 ZCCHC11Q5TAX3 1644 aaKnown RBP16.45■□□□□ 0.22
GFAP-218ENST00000591327 NBPF1Q3BBV0 1214 aa16.44■□□□□ 0.22
GFAP-218ENST00000591327 MYT1LQ9UL68 1186 aa16.44■□□□□ 0.22
GFAP-218ENST00000591327 PRAG1Q86YV5 1406 aa16.44■□□□□ 0.22
GFAP-218ENST00000591327 PLXNC1O60486 1568 aa16.44■□□□□ 0.22
GFAP-218ENST00000591327 PLCH2O75038 1416 aa16.43■□□□□ 0.22
GFAP-218ENST00000591327 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
GFAP-218ENST00000591327 A2MP01023 1474 aa16.42■□□□□ 0.22
GFAP-218ENST00000591327 TRPM1Q7Z4N2 1603 aa16.41■□□□□ 0.22
GFAP-218ENST00000591327 TRAPPC8Q9Y2L5 1435 aa16.41■□□□□ 0.22
GFAP-218ENST00000591327 IQGAP3Q86VI3 1631 aa16.41■□□□□ 0.22
GFAP-218ENST00000591327 EFCAB2Q5VUJ9 269 aa16.41■□□□□ 0.22
GFAP-218ENST00000591327 ZBTB47Q9UFB7 747 aaPredicted RBP16.41■□□□□ 0.22
GFAP-218ENST00000591327 DUOX2Q9NRD8 1548 aa16.4■□□□□ 0.22
GFAP-218ENST00000591327 BRPF3Q9ULD4 1205 aa16.4■□□□□ 0.22
GFAP-218ENST00000591327 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
GFAP-218ENST00000591327 UHRF1BP1LA0JNW5 1464 aa16.38■□□□□ 0.21
GFAP-218ENST00000591327 ABCC1P33527 1531 aa16.37■□□□□ 0.21
GFAP-218ENST00000591327 ERBINQ96RT1 1412 aa16.37■□□□□ 0.21
GFAP-218ENST00000591327 TMC1Q8TDI8 760 aa16.37■□□□□ 0.21
GFAP-218ENST00000591327 AFAP1Q8N556 730 aa16.37■□□□□ 0.21
GFAP-218ENST00000591327 PKNOX2Q96KN3 472 aa16.36■□□□□ 0.21
GFAP-218ENST00000591327 MAGI2Q86UL8 1455 aa16.36■□□□□ 0.21
GFAP-218ENST00000591327 ANP32AP39687 249 aaKnown RBP16.36■□□□□ 0.21
GFAP-218ENST00000591327 NEFMP07197 916 aa16.36■□□□□ 0.21
GFAP-218ENST00000591327 E9PCH4 1651 aa16.35■□□□□ 0.21
GFAP-218ENST00000591327 PLEKHG5O94827 1062 aa16.34■□□□□ 0.21
GFAP-218ENST00000591327 PPP4R2Q9NY27 417 aa16.34■□□□□ 0.21
GFAP-218ENST00000591327 GPRASP1Q5JY77 1395 aa16.34■□□□□ 0.21
GFAP-218ENST00000591327 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.2
GFAP-218ENST00000591327 SPAG9O60271 1321 aaKnown RBP16.33■□□□□ 0.2
GFAP-218ENST00000591327 MYBBP1AQ9BQG0 1328 aaKnown RBP16.32■□□□□ 0.2
GFAP-218ENST00000591327 SMG6Q86US8 1419 aaKnown RBP16.32■□□□□ 0.2
GFAP-218ENST00000591327 ATP10AO60312 1499 aa16.32■□□□□ 0.2
GFAP-218ENST00000591327 DISP3Q9P2K9 1392 aa16.32■□□□□ 0.2
GFAP-218ENST00000591327 TESK2Q96S53 571 aa16.31■□□□□ 0.2
GFAP-218ENST00000591327 RALBP1Q15311 655 aa16.3■□□□□ 0.2
GFAP-218ENST00000591327 PRDM15P57071 1507 aaPredicted RBP16.3■□□□□ 0.2
GFAP-218ENST00000591327 NUDCQ9Y266 331 aa16.3■□□□□ 0.2
GFAP-218ENST00000591327 BRD4O60885 1362 aaPredicted RBP16.28■□□□□ 0.2
GFAP-218ENST00000591327 PER1O15534 1290 aaPredicted RBP16.28■□□□□ 0.2
GFAP-218ENST00000591327 LRPPRCP42704 1394 aaKnown RBP16.28■□□□□ 0.2
GFAP-218ENST00000591327 ZFYVE16Q7Z3T8 1539 aa16.28■□□□□ 0.2
GFAP-218ENST00000591327 COL17A1Q9UMD9 1497 aaPredicted RBP16.28■□□□□ 0.2
GFAP-218ENST00000591327 ARXQ96QS3 562 aa16.28■□□□□ 0.2
GFAP-218ENST00000591327 KTN1Q86UP2 1357 aaKnown RBP16.26■□□□□ 0.19
GFAP-218ENST00000591327 LAMC1P11047 1609 aa16.26■□□□□ 0.19
GFAP-218ENST00000591327 EIF2AK4Q9P2K8 1649 aaKnown RBP16.26■□□□□ 0.19
GFAP-218ENST00000591327 PARD3Q8TEW0 1356 aa16.26■□□□□ 0.19
GFAP-218ENST00000591327 CC2D1BQ5T0F9 858 aaKnown RBP16.25■□□□□ 0.19
GFAP-218ENST00000591327 WDR7Q9Y4E6 1490 aa16.25■□□□□ 0.19
GFAP-218ENST00000591327 RTEL1-TNFRSF6BF6WH68 1400 aa16.25■□□□□ 0.19
GFAP-218ENST00000591327 PANK3Q9H999 370 aa16.24■□□□□ 0.19
GFAP-218ENST00000591327 VSIG10Q8N0Z9 540 aa16.23■□□□□ 0.19
GFAP-218ENST00000591327 FANCAO15360 1455 aa16.23■□□□□ 0.19
GFAP-218ENST00000591327 NLRP13Q86W25 1043 aa16.23■□□□□ 0.19
GFAP-218ENST00000591327 ARAP3Q8WWN8 1544 aa16.23■□□□□ 0.19
GFAP-218ENST00000591327 TMF1P82094 1093 aa16.22■□□□□ 0.19
GFAP-218ENST00000591327 RNF17Q9BXT8 1623 aaKnown RBP16.21■□□□□ 0.19
GFAP-218ENST00000591327 RNF123Q5XPI4 1314 aa16.21■□□□□ 0.19
GFAP-218ENST00000591327 TRPM2O94759 1503 aa16.21■□□□□ 0.19
GFAP-218ENST00000591327 MADDQ8WXG6 1647 aa16.2■□□□□ 0.18
GFAP-218ENST00000591327 SCAPERQ9BY12 1400 aa16.2■□□□□ 0.18
GFAP-218ENST00000591327 KIF3BO15066 747 aa16.2■□□□□ 0.18
GFAP-218ENST00000591327 ATP7AQ04656 1500 aa16.2■□□□□ 0.18
GFAP-218ENST00000591327 ABCA9Q8IUA7 1624 aa16.2■□□□□ 0.18
GFAP-218ENST00000591327 CLTCL1P53675 1640 aa16.2■□□□□ 0.18
GFAP-218ENST00000591327 IPO9Q96P70 1041 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms