RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 GOLGA6L22H0YM25 854 aa20.64■□□□□ 0.89
APBA3-205ENST00000590064 CFAP53Q96M91 514 aa20.64■□□□□ 0.89
APBA3-205ENST00000590064 POLA1P09884 1462 aaPredicted RBP20.63■□□□□ 0.89
APBA3-205ENST00000590064 RPRD2Q5VT52 1461 aaKnown RBP20.63■□□□□ 0.89
APBA3-205ENST00000590064 CCDC144AA2RUR9 1427 aa20.63■□□□□ 0.89
APBA3-205ENST00000590064 BCL2L13Q9BXK5 485 aa20.63■□□□□ 0.89
APBA3-205ENST00000590064 NBPF1Q3BBV0 1214 aa20.62■□□□□ 0.89
APBA3-205ENST00000590064 ANKRD50Q9ULJ7 1429 aa20.61■□□□□ 0.89
APBA3-205ENST00000590064 KIAA1107Q9UPP5 1409 aa20.61■□□□□ 0.89
APBA3-205ENST00000590064 DAPK1P53355 1430 aa20.61■□□□□ 0.89
APBA3-205ENST00000590064 RRP7AQ9Y3A4 280 aaKnown RBP20.6■□□□□ 0.89
APBA3-205ENST00000590064 MAPK8IP3Q9UPT6 1336 aa20.6■□□□□ 0.89
APBA3-205ENST00000590064 RWDD1Q9H446 243 aaPredicted RBP20.59■□□□□ 0.89
APBA3-205ENST00000590064 PMFBP1Q8TBY8 1022 aa20.59■□□□□ 0.89
APBA3-205ENST00000590064 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.89
APBA3-205ENST00000590064 MORC1Q86VD1 984 aa20.58■□□□□ 0.89
APBA3-205ENST00000590064 CDK13Q14004 1512 aaKnown RBP20.58■□□□□ 0.89
APBA3-205ENST00000590064 CGNL1Q0VF96 1302 aa20.57■□□□□ 0.88
APBA3-205ENST00000590064 CFAP43Q8NDM7 1665 aa20.57■□□□□ 0.88
APBA3-205ENST00000590064 MYH16Q9H6N6 1097 aa20.56■□□□□ 0.88
APBA3-205ENST00000590064 TOPBP1Q92547 1522 aa20.56■□□□□ 0.88
APBA3-205ENST00000590064 U2SURPO15042 1029 aaKnown RBP20.55■□□□□ 0.88
APBA3-205ENST00000590064 PANK1Q8TE04 598 aa20.55■□□□□ 0.88
APBA3-205ENST00000590064 E9PSI1 815 aa20.55■□□□□ 0.88
APBA3-205ENST00000590064 VSIG10Q8N0Z9 540 aa20.53■□□□□ 0.88
APBA3-205ENST00000590064 HSP90AA2PQ14568 343 aaPredicted RBP20.53■□□□□ 0.88
APBA3-205ENST00000590064 FAM43AQ8N2R8 423 aa20.53■□□□□ 0.88
APBA3-205ENST00000590064 BCAR3O75815 825 aa20.52■□□□□ 0.88
APBA3-205ENST00000590064 POGKQ9P215 609 aa20.52■□□□□ 0.88
APBA3-205ENST00000590064 EPRSP07814 1512 aaKnown RBP20.52■□□□□ 0.88
APBA3-205ENST00000590064 NESP48681 1621 aa20.52■□□□□ 0.87
APBA3-205ENST00000590064 RNF123Q5XPI4 1314 aa20.51■□□□□ 0.87
APBA3-205ENST00000590064 DHX29Q7Z478 1369 aaKnown RBP20.51■□□□□ 0.87
APBA3-205ENST00000590064 FOXD4L1Q9NU39 408 aa20.51■□□□□ 0.87
APBA3-205ENST00000590064 ABCA10Q8WWZ4 1543 aa20.51■□□□□ 0.87
APBA3-205ENST00000590064 ROCK1Q13464 1354 aa20.5■□□□□ 0.87
APBA3-205ENST00000590064 ITPRIPQ8IWB1 547 aa20.5■□□□□ 0.87
APBA3-205ENST00000590064 ABCC5O15440 1437 aa20.5■□□□□ 0.87
APBA3-205ENST00000590064 PRDM2Q13029 1718 aa20.49■□□□□ 0.87
APBA3-205ENST00000590064 PPP2R1AP30153 589 aa20.49■□□□□ 0.87
APBA3-205ENST00000590064 U2AF1L5P0DN76 240 aaPredicted RBP20.48■□□□□ 0.87
APBA3-205ENST00000590064 U2AF1Q01081 240 aaKnown RBP eCLIP20.48■□□□□ 0.87
APBA3-205ENST00000590064 GBP4Q96PP9 640 aa20.47■□□□□ 0.87
APBA3-205ENST00000590064 CARMIL2Q6F5E8 1435 aa20.46■□□□□ 0.87
APBA3-205ENST00000590064 MSNP26038 577 aaKnown RBP20.46■□□□□ 0.87
APBA3-205ENST00000590064 HECW1Q76N89 1606 aa20.45■□□□□ 0.86
APBA3-205ENST00000590064 SMC4Q9NTJ3 1288 aa20.45■□□□□ 0.86
APBA3-205ENST00000590064 PRG4Q92954 1404 aaPredicted RBP20.45■□□□□ 0.86
APBA3-205ENST00000590064 SLC24A1O60721 1099 aa20.44■□□□□ 0.86
APBA3-205ENST00000590064 WASHC2CQ9Y4E1 1318 aa20.44■□□□□ 0.86
APBA3-205ENST00000590064 PTMAP06454 111 aaKnown RBP20.43■□□□□ 0.86
APBA3-205ENST00000590064 DNMBPQ6XZF7 1577 aa20.43■□□□□ 0.86
APBA3-205ENST00000590064 JPH4Q96JJ6 628 aa20.42■□□□□ 0.86
APBA3-205ENST00000590064 SNAPC4Q5SXM2 1469 aa20.42■□□□□ 0.86
APBA3-205ENST00000590064 ARID3AQ99856 593 aa20.42■□□□□ 0.86
APBA3-205ENST00000590064 TPRNQ4KMQ1 711 aa20.42■□□□□ 0.86
APBA3-205ENST00000590064 UGGT2Q9NYU1 1516 aa20.42■□□□□ 0.86
APBA3-205ENST00000590064 GRIN2BQ13224 1484 aa20.42■□□□□ 0.86
APBA3-205ENST00000590064 CHMP5Q9NZZ3 219 aa20.41■□□□□ 0.86
APBA3-205ENST00000590064 DDX11L8A8MPP1 907 aa20.4■□□□□ 0.86
APBA3-205ENST00000590064 DNTTIP2Q5QJE6 756 aaKnown RBP20.4■□□□□ 0.86
APBA3-205ENST00000590064 SAFB2Q14151 953 aaKnown RBP eCLIP20.38■□□□□ 0.85
APBA3-205ENST00000590064 EIF3AQ14152 1382 aaKnown RBP20.38■□□□□ 0.85
APBA3-205ENST00000590064 CUL7Q14999 1698 aa20.38■□□□□ 0.85
APBA3-205ENST00000590064 DUSP27Q5VZP5 1158 aa20.37■□□□□ 0.85
APBA3-205ENST00000590064 C22orf23Q9BZE7 217 aa20.37■□□□□ 0.85
APBA3-205ENST00000590064 PDZRN3Q9UPQ7 1066 aa20.36■□□□□ 0.85
APBA3-205ENST00000590064 ZBTB7CA1YPR0 619 aa20.36■□□□□ 0.85
APBA3-205ENST00000590064 TRAK2O60296 914 aa20.36■□□□□ 0.85
APBA3-205ENST00000590064 RSPH4AQ5TD94 716 aa20.36■□□□□ 0.85
APBA3-205ENST00000590064 SLFN5Q08AF3 891 aa20.35■□□□□ 0.85
APBA3-205ENST00000590064 C8orf34Q49A92 452 aa20.35■□□□□ 0.85
APBA3-205ENST00000590064 ZKSCAN2Q63HK3 967 aa20.34■□□□□ 0.85
APBA3-205ENST00000590064 C9orf84Q5VXU9 1444 aa20.34■□□□□ 0.85
APBA3-205ENST00000590064 PDE3AQ14432 1141 aa20.33■□□□□ 0.84
APBA3-205ENST00000590064 TROQ12816 1431 aaPredicted RBP20.33■□□□□ 0.84
APBA3-205ENST00000590064 TEX14Q8IWB6 1497 aa20.32■□□□□ 0.84
APBA3-205ENST00000590064 CC2D2AQ9P2K1 1620 aa20.32■□□□□ 0.84
APBA3-205ENST00000590064 LRPPRCP42704 1394 aaKnown RBP20.32■□□□□ 0.84
APBA3-205ENST00000590064 ERBINQ96RT1 1412 aa20.32■□□□□ 0.84
APBA3-205ENST00000590064 IPO8O15397 1037 aaKnown RBP20.31■□□□□ 0.84
APBA3-205ENST00000590064 MRE11P49959 708 aa20.31■□□□□ 0.84
APBA3-205ENST00000590064 SPATA31E1Q6ZUB1 1445 aa20.31■□□□□ 0.84
APBA3-205ENST00000590064 THOC2Q8NI27 1593 aaKnown RBP20.31■□□□□ 0.84
APBA3-205ENST00000590064 UBE2Q2Q8WVN8 375 aa20.3■□□□□ 0.84
APBA3-205ENST00000590064 APBB1O00213 710 aa20.3■□□□□ 0.84
APBA3-205ENST00000590064 TRAK1Q9UPV9 953 aa20.29■□□□□ 0.84
APBA3-205ENST00000590064 DZIP1LQ8IYY4 767 aaKnown RBP20.29■□□□□ 0.84
APBA3-205ENST00000590064 DDX49Q9Y6V7 483 aaKnown RBP20.29■□□□□ 0.84
APBA3-205ENST00000590064 MCM4P33991 863 aa20.29■□□□□ 0.84
APBA3-205ENST00000590064 TCOF1Q13428 1488 aaKnown RBP20.28■□□□□ 0.84
APBA3-205ENST00000590064 CAMSAP2Q08AD1 1489 aa20.28■□□□□ 0.84
APBA3-205ENST00000590064 IGHDP01880 384 aa20.28■□□□□ 0.84
APBA3-205ENST00000590064 CASC1Q6TDU7 716 aa20.28■□□□□ 0.84
APBA3-205ENST00000590064 STAG3Q9UJ98 1225 aa20.28■□□□□ 0.84
APBA3-205ENST00000590064 NGEFQ8N5V2 710 aa20.27■□□□□ 0.84
APBA3-205ENST00000590064 PLCB2Q00722 1185 aa20.27■□□□□ 0.83
APBA3-205ENST00000590064 TCP11L2Q8N4U5 519 aa20.27■□□□□ 0.83
APBA3-205ENST00000590064 PARD3Q8TEW0 1356 aa20.26■□□□□ 0.83
APBA3-205ENST00000590064 PTMSP20962 102 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms