RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 PPRC1Q5VV67 1664 aaKnown RBP15.15■□□□□ 0.02
GFAP-216ENST00000589701 PRKRIP1Q9H875 184 aaPredicted RBP15.15■□□□□ 0.02
GFAP-216ENST00000589701 MRS2Q9HD23 443 aa15.15■□□□□ 0.02
GFAP-216ENST00000589701 ADGRL2O95490 1459 aa15.15■□□□□ 0.02
GFAP-216ENST00000589701 MBD5Q9P267 1494 aa15.15■□□□□ 0.02
GFAP-216ENST00000589701 CDC42BPBQ9Y5S2 1711 aa15.15■□□□□ 0.02
GFAP-216ENST00000589701 MAP3K4Q9Y6R4 1608 aa15.14■□□□□ 0.01
GFAP-216ENST00000589701 TTC37Q6PGP7 1564 aa15.14■□□□□ 0.01
GFAP-216ENST00000589701 SAMD9LQ8IVG5 1584 aa15.14■□□□□ 0.01
GFAP-216ENST00000589701 CNTLNQ9NXG0 1405 aa15.14■□□□□ 0.01
GFAP-216ENST00000589701 USP47Q96K76 1375 aa15.14■□□□□ 0.01
GFAP-216ENST00000589701 SYCP2Q9BX26 1530 aa15.13■□□□□ 0.01
GFAP-216ENST00000589701 SPATA31E1Q6ZUB1 1445 aa15.13■□□□□ 0.01
GFAP-216ENST00000589701 ARHGAP5Q13017 1502 aa15.13■□□□□ 0.01
GFAP-216ENST00000589701 CARD11Q9BXL7 1154 aa15.12■□□□□ 0.01
GFAP-216ENST00000589701 WDR7Q9Y4E6 1490 aa15.12■□□□□ 0.01
GFAP-216ENST00000589701 ST20-MTHFSA0A0A6YYL1 179 aa15.1■□□□□ 0.01
GFAP-216ENST00000589701 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.09■□□□□ 0.01
GFAP-216ENST00000589701 BCORL1Q5H9F3 1711 aa15.09■□□□□ 0.01
GFAP-216ENST00000589701 NBPF1Q3BBV0 1214 aa15.09■□□□□ 0.01
GFAP-216ENST00000589701 AFAP1Q8N556 730 aa15.08■□□□□ 0
GFAP-216ENST00000589701 PODXL2Q9NZ53 605 aa15.08■□□□□ 0
GFAP-216ENST00000589701 NEFLP07196 543 aa15.07■□□□□ 0
GFAP-216ENST00000589701 CCDC141Q6ZP82 1450 aa15.07■□□□□ 0
GFAP-216ENST00000589701 PREX2Q70Z35 1606 aa15.06■□□□□ 0
GFAP-216ENST00000589701 ARHGEF12Q9NZN5 1544 aa15.06■□□□□ 0
GFAP-216ENST00000589701 PLEKHH2Q8IVE3 1493 aa15.06■□□□□ 0
GFAP-216ENST00000589701 MYT1LQ9UL68 1186 aa15.05■□□□□ -0
GFAP-216ENST00000589701 PKNOX2Q96KN3 472 aa15.04■□□□□ -0
GFAP-216ENST00000589701 SHANK2Q9UPX8 1470 aa15.04■□□□□ -0
GFAP-216ENST00000589701 FAM135AQ9P2D6 1515 aa15.03■□□□□ -0
GFAP-216ENST00000589701 ARHGEF5Q12774 1597 aa15.02■□□□□ -0
GFAP-216ENST00000589701 CD109Q6YHK3 1445 aa15.02■□□□□ -0
GFAP-216ENST00000589701 ROCK2O75116 1388 aaKnown RBP15.01□□□□□ -0.01
GFAP-216ENST00000589701 KDM4FA0A1W2PPD8 638 aa15□□□□□ -0.01
GFAP-216ENST00000589701 TRAPPC8Q9Y2L5 1435 aa15□□□□□ -0.01
GFAP-216ENST00000589701 COL17A1Q9UMD9 1497 aaPredicted RBP15□□□□□ -0.01
GFAP-216ENST00000589701 MYO5CQ9NQX4 1742 aa15□□□□□ -0.01
GFAP-216ENST00000589701 DHX29Q7Z478 1369 aaKnown RBP15□□□□□ -0.01
GFAP-216ENST00000589701 RSPH4AQ5TD94 716 aa15□□□□□ -0.01
GFAP-216ENST00000589701 CCDC144AA2RUR9 1427 aa14.99□□□□□ -0.01
GFAP-216ENST00000589701 PLA2R1Q13018 1463 aa14.99□□□□□ -0.01
GFAP-216ENST00000589701 KDM5CP41229 1560 aa14.98□□□□□ -0.01
GFAP-216ENST00000589701 EFCAB2Q5VUJ9 269 aa14.98□□□□□ -0.01
GFAP-216ENST00000589701 PLCH2O75038 1416 aa14.94□□□□□ -0.02
GFAP-216ENST00000589701 RALGAPBQ86X10 1494 aa14.94□□□□□ -0.02
GFAP-216ENST00000589701 ABCA9Q8IUA7 1624 aa14.94□□□□□ -0.02
GFAP-216ENST00000589701 ADGRL1O94910 1474 aa14.93□□□□□ -0.02
GFAP-216ENST00000589701 SPAG9O60271 1321 aaKnown RBP14.93□□□□□ -0.02
GFAP-216ENST00000589701 KDM5DQ9BY66 1539 aa14.92□□□□□ -0.02
GFAP-216ENST00000589701 SENP3Q9H4L4 574 aaPredicted RBP14.92□□□□□ -0.02
GFAP-216ENST00000589701 TMC1Q8TDI8 760 aa14.92□□□□□ -0.02
GFAP-216ENST00000589701 UHRF1BP1Q6BDS2 1440 aa14.92□□□□□ -0.02
GFAP-216ENST00000589701 ARAP3Q8WWN8 1544 aa14.91□□□□□ -0.02
GFAP-216ENST00000589701 A2MP01023 1474 aa14.91□□□□□ -0.02
GFAP-216ENST00000589701 CC2D1BQ5T0F9 858 aaKnown RBP14.91□□□□□ -0.02
GFAP-216ENST00000589701 POLR1AO95602 1720 aaPredicted RBP14.91□□□□□ -0.02
GFAP-216ENST00000589701 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.9□□□□□ -0.02
GFAP-216ENST00000589701 PRAG1Q86YV5 1406 aa14.9□□□□□ -0.02
GFAP-216ENST00000589701 KIF3BO15066 747 aa14.89□□□□□ -0.03
GFAP-216ENST00000589701 MAST1Q9Y2H9 1570 aa14.89□□□□□ -0.03
GFAP-216ENST00000589701 B4GALNT3Q6L9W6 998 aa14.88□□□□□ -0.03
GFAP-216ENST00000589701 DISP3Q9P2K9 1392 aa14.88□□□□□ -0.03
GFAP-216ENST00000589701 NEO1Q92859 1461 aa14.87□□□□□ -0.03
GFAP-216ENST00000589701 SCAPERQ9BY12 1400 aa14.87□□□□□ -0.03
GFAP-216ENST00000589701 ZBED9Q6R2W3 1325 aa14.86□□□□□ -0.03
GFAP-216ENST00000589701 PNISRQ8TF01 805 aaKnown RBP14.86□□□□□ -0.03
GFAP-216ENST00000589701 ABCC1P33527 1531 aa14.86□□□□□ -0.03
GFAP-216ENST00000589701 TESK2Q96S53 571 aa14.84□□□□□ -0.03
GFAP-216ENST00000589701 UNC13BO14795 1591 aa14.84□□□□□ -0.03
GFAP-216ENST00000589701 PLXNC1O60486 1568 aa14.84□□□□□ -0.03
GFAP-216ENST00000589701 DUOX2Q9NRD8 1548 aa14.84□□□□□ -0.03
GFAP-216ENST00000589701 PANK3Q9H999 370 aa14.83□□□□□ -0.03
GFAP-216ENST00000589701 TRPM1Q7Z4N2 1603 aa14.82□□□□□ -0.04
GFAP-216ENST00000589701 FANCAO15360 1455 aa14.82□□□□□ -0.04
GFAP-216ENST00000589701 CFAP65Q6ZU64 1925 aaKnown RBP14.82□□□□□ -0.04
GFAP-216ENST00000589701 IQGAP3Q86VI3 1631 aa14.81□□□□□ -0.04
GFAP-216ENST00000589701 RBM19Q9Y4C8 960 aaKnown RBP14.81□□□□□ -0.04
GFAP-216ENST00000589701 CFAP74Q9C0B2 1584 aa14.81□□□□□ -0.04
GFAP-216ENST00000589701 UGGT1Q9NYU2 1555 aa14.8□□□□□ -0.04
GFAP-216ENST00000589701 CHGAP10645 457 aaKnown RBP14.8□□□□□ -0.04
GFAP-216ENST00000589701 ERBINQ96RT1 1412 aa14.79□□□□□ -0.04
GFAP-216ENST00000589701 PER1O15534 1290 aaPredicted RBP14.79□□□□□ -0.04
GFAP-216ENST00000589701 NUTM2DQ5VT03 806 aaPredicted RBP14.78□□□□□ -0.04
GFAP-216ENST00000589701 GGT6Q6P531 493 aa14.78□□□□□ -0.04
GFAP-216ENST00000589701 E9PCH4 1651 aa14.78□□□□□ -0.04
GFAP-216ENST00000589701 ZFYVE16Q7Z3T8 1539 aa14.78□□□□□ -0.04
GFAP-216ENST00000589701 ARID4BQ4LE39 1312 aaPredicted RBP14.77□□□□□ -0.04
GFAP-216ENST00000589701 MYBBP1AQ9BQG0 1328 aaKnown RBP14.77□□□□□ -0.04
GFAP-216ENST00000589701 DEKP35659 375 aaKnown RBP14.77□□□□□ -0.05
GFAP-216ENST00000589701 ATP10AO60312 1499 aa14.76□□□□□ -0.05
GFAP-216ENST00000589701 MSH5O43196 834 aa14.76□□□□□ -0.05
GFAP-216ENST00000589701 CFAP70Q5T0N1 1121 aa14.76□□□□□ -0.05
GFAP-216ENST00000589701 FRMPD1Q5SYB0 1578 aa14.75□□□□□ -0.05
GFAP-216ENST00000589701 RAPGEF3O95398 923 aa14.75□□□□□ -0.05
GFAP-216ENST00000589701 CDCA7LQ96GN5 454 aa14.75□□□□□ -0.05
GFAP-216ENST00000589701 TMF1P82094 1093 aa14.74□□□□□ -0.05
GFAP-216ENST00000589701 RTEL1-TNFRSF6BF6WH68 1400 aa14.74□□□□□ -0.05
GFAP-216ENST00000589701 MAGI2Q86UL8 1455 aa14.74□□□□□ -0.05
GFAP-216ENST00000589701 KTN1Q86UP2 1357 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms