RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 ARID3AQ99856 593 aa8.25□□□□□ -1.09
AP000547.3-204ENST00000588548 GRPEL1Q9HAV7 217 aa8.25□□□□□ -1.09
AP000547.3-204ENST00000588548 CGNQ9P2M7 1197 aaKnown RBP8.25□□□□□ -1.09
AP000547.3-204ENST00000588548 CERS3Q8IU89 383 aa8.25□□□□□ -1.09
AP000547.3-204ENST00000588548 PTMAP06454 111 aaKnown RBP8.24□□□□□ -1.09
AP000547.3-204ENST00000588548 ZSCAN30Q86W11 494 aa8.24□□□□□ -1.09
AP000547.3-204ENST00000588548 YY1AP1Q9H869 796 aa8.24□□□□□ -1.09
AP000547.3-204ENST00000588548 R3HCC1Q9Y3T6 440 aaKnown RBP8.24□□□□□ -1.09
AP000547.3-204ENST00000588548 CFTRP13569 1480 aa8.24□□□□□ -1.09
AP000547.3-204ENST00000588548 VPS8Q8N3P4 1428 aa8.24□□□□□ -1.09
AP000547.3-204ENST00000588548 NGEFQ8N5V2 710 aa8.24□□□□□ -1.09
AP000547.3-204ENST00000588548 BIVM-ERCC5R4GMW8 1640 aa8.23□□□□□ -1.09
AP000547.3-204ENST00000588548 APPP05067 770 aa8.23□□□□□ -1.09
AP000547.3-204ENST00000588548 FAM9BQ8IZU0 186 aa8.23□□□□□ -1.09
AP000547.3-204ENST00000588548 GEMIN8Q9NWZ8 242 aaKnown RBP8.23□□□□□ -1.09
AP000547.3-204ENST00000588548 PTMSP20962 102 aa8.22□□□□□ -1.09
AP000547.3-204ENST00000588548 TMED8Q6PL24 325 aaPredicted RBP8.22□□□□□ -1.09
AP000547.3-204ENST00000588548 TICAM2Q86XR7 235 aa8.22□□□□□ -1.09
AP000547.3-204ENST00000588548 EXOC6Q8TAG9 804 aa8.22□□□□□ -1.09
AP000547.3-204ENST00000588548 PATL2C9JE40 543 aaKnown RBP8.21□□□□□ -1.1
AP000547.3-204ENST00000588548 PRXQ9BXM0 1461 aa8.21□□□□□ -1.1
AP000547.3-204ENST00000588548 AEBP1Q8IUX7 1158 aa8.21□□□□□ -1.1
AP000547.3-204ENST00000588548 FOXD4L1Q9NU39 408 aa8.21□□□□□ -1.1
AP000547.3-204ENST00000588548 CBX1P83916 185 aa8.2□□□□□ -1.1
AP000547.3-204ENST00000588548 RALBP1Q15311 655 aa8.2□□□□□ -1.1
AP000547.3-204ENST00000588548 ANTXR1Q9H6X2 564 aa8.2□□□□□ -1.1
AP000547.3-204ENST00000588548 RRBP1Q9P2E9 1410 aaKnown RBP8.2□□□□□ -1.1
AP000547.3-204ENST00000588548 KCNJ4P48050 445 aa8.2□□□□□ -1.1
AP000547.3-204ENST00000588548 FAM161AQ3B820 660 aa8.2□□□□□ -1.1
AP000547.3-204ENST00000588548 PPP1R9BQ96SB3 815 aa8.2□□□□□ -1.1
AP000547.3-204ENST00000588548 P3H3Q8IVL6 736 aa8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 GZF1Q9H116 711 aaPredicted RBP8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 VIRMAQ69YN4 1812 aaKnown RBP8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 ZNF500O60304 480 aaPredicted RBP8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 MSNP26038 577 aaKnown RBP8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 MCM4P33991 863 aa8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 C8orf34Q49A92 452 aa8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 MRS2Q9HD23 443 aa8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 PHF14O94880 888 aa8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 RRP1P56182 461 aaKnown RBP8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 CCDC173Q0VFZ6 552 aa8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 NCOA2Q15596 1464 aa8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 BECN1Q14457 450 aa8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 KANK4Q5T7N3 995 aaPredicted RBP8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 SASS6Q6UVJ0 657 aa8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 CHMP4CQ96CF2 233 aa8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 CARD10Q9BWT7 1032 aa8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 TRAK2O60296 914 aa8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 MCCP23508 829 aa8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 FAM43BQ6ZT52 329 aaPredicted RBP8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 TAOK2Q9UL54 1235 aa8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 CCDC9Q9Y3X0 531 aaKnown RBP8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 ARAP1Q96P48 1450 aa8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 CADPSQ9ULU8 1353 aa8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 ATP2B3Q16720 1220 aa8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 CC2D1BQ5T0F9 858 aaKnown RBP8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 RAB3GAP2Q9H2M9 1393 aa8.16□□□□□ -1.1
AP000547.3-204ENST00000588548 TULP2O00295 520 aa8.16□□□□□ -1.1
AP000547.3-204ENST00000588548 PRKRIP1Q9H875 184 aaPredicted RBP8.16□□□□□ -1.1
AP000547.3-204ENST00000588548 KIF27Q86VH2 1401 aa8.16□□□□□ -1.1
AP000547.3-204ENST00000588548 CNTLNQ9NXG0 1405 aa8.16□□□□□ -1.1
AP000547.3-204ENST00000588548 CSPP1Q1MSJ5 1256 aa8.15□□□□□ -1.1
AP000547.3-204ENST00000588548 HS1BP3Q53T59 392 aa8.15□□□□□ -1.1
AP000547.3-204ENST00000588548 POLR3GLQ9BT43 218 aa8.15□□□□□ -1.1
AP000547.3-204ENST00000588548 NBPF1Q3BBV0 1214 aa8.15□□□□□ -1.1
AP000547.3-204ENST00000588548 SKAP1Q86WV1 359 aa8.15□□□□□ -1.1
AP000547.3-204ENST00000588548 PRR29P0C7W0 189 aa8.14□□□□□ -1.11
AP000547.3-204ENST00000588548 CAPN2P17655 700 aa8.14□□□□□ -1.11
AP000547.3-204ENST00000588548 SLKQ9H2G2 1235 aaPredicted RBP8.14□□□□□ -1.11
AP000547.3-204ENST00000588548 TSPYL1Q9H0U9 437 aa8.14□□□□□ -1.11
AP000547.3-204ENST00000588548 ERICH3Q5RHP9 1530 aa8.14□□□□□ -1.11
AP000547.3-204ENST00000588548 IGF1RP08069 1367 aa8.14□□□□□ -1.11
AP000547.3-204ENST00000588548 TRIM6-TRIM34B2RNG4 842 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 ZNF771Q7L3S4 317 aaPredicted RBP8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 EGFL6Q8IUX8 553 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 ZNF710Q8N1W2 664 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 ZBTB9Q96C00 473 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 TRIM34Q9BYJ4 488 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 EFCC1Q9HA90 598 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 KTN1Q86UP2 1357 aaKnown RBP8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 GAS2L3Q86XJ1 694 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 CEP120Q8N960 986 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 TIGD1Q96MW7 591 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 FHAD1B1AJZ9 1412 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 NESP48681 1621 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 CCDC66A2RUB6 948 aa8.12□□□□□ -1.11
AP000547.3-204ENST00000588548 PLCD4Q9BRC7 762 aa8.12□□□□□ -1.11
AP000547.3-204ENST00000588548 NOL7Q9UMY1 257 aaKnown RBP8.12□□□□□ -1.11
AP000547.3-204ENST00000588548 USP19O94966 1318 aa8.12□□□□□ -1.11
AP000547.3-204ENST00000588548 MYRIPQ8NFW9 859 aa8.12□□□□□ -1.11
AP000547.3-204ENST00000588548 FGD5Q6ZNL6 1462 aa8.12□□□□□ -1.11
AP000547.3-204ENST00000588548 LOC102724159A0A0B4J2E5 919 aa8.11□□□□□ -1.11
AP000547.3-204ENST00000588548 PWP2Q15269 919 aaKnown RBP8.11□□□□□ -1.11
AP000547.3-204ENST00000588548 ARHGAP35Q9NRY4 1499 aa8.11□□□□□ -1.11
AP000547.3-204ENST00000588548 XPCQ01831 940 aaPredicted RBP8.11□□□□□ -1.11
AP000547.3-204ENST00000588548 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.11□□□□□ -1.11
AP000547.3-204ENST00000588548 KIF3AQ9Y496 699 aa8.11□□□□□ -1.11
AP000547.3-204ENST00000588548 KDM2BQ8NHM5 1336 aa8.1□□□□□ -1.11
AP000547.3-204ENST00000588548 IGSF3O75054 1194 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms