RNA–Protein interactions for RNA: ENST00000588236.1

SPIRE1-212, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2

Gene SPIRE1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-212ENST00000588236 ARSIQ5FYB1 569 aa6.93□□□□□ -1.3
SPIRE1-212ENST00000588236 ZNF454Q8N9F8 522 aa6.93□□□□□ -1.3
SPIRE1-212ENST00000588236 KCNH8Q96L42 1107 aa6.93□□□□□ -1.3
SPIRE1-212ENST00000588236 TRIM66O15016 1216 aa6.92□□□□□ -1.3
SPIRE1-212ENST00000588236 OATP04181 439 aa6.92□□□□□ -1.3
SPIRE1-212ENST00000588236 NUDT7P0C024 238 aa6.92□□□□□ -1.3
SPIRE1-212ENST00000588236 HOXB1P14653 301 aaPredicted RBP6.92□□□□□ -1.3
SPIRE1-212ENST00000588236 AMHR2Q16671 573 aa6.91□□□□□ -1.3
SPIRE1-212ENST00000588236 C6orf132Q5T0Z8 1188 aa6.91□□□□□ -1.3
SPIRE1-212ENST00000588236 PDE4DQ08499 809 aa6.9□□□□□ -1.3
SPIRE1-212ENST00000588236 RBM33Q96EV2 1170 aaKnown RBP6.9□□□□□ -1.3
SPIRE1-212ENST00000588236 BCL2L12Q9HB09 334 aa6.89□□□□□ -1.31
SPIRE1-212ENST00000588236 NPDC1Q9NQX5 325 aaPredicted RBP6.89□□□□□ -1.31
SPIRE1-212ENST00000588236 ONECUT3O60422 494 aaPredicted RBP6.88□□□□□ -1.31
SPIRE1-212ENST00000588236 PTPREP23469 700 aa6.88□□□□□ -1.31
SPIRE1-212ENST00000588236 CCDC102AQ96A19 550 aa6.88□□□□□ -1.31
SPIRE1-212ENST00000588236 CLCN1P35523 988 aa6.87□□□□□ -1.31
SPIRE1-212ENST00000588236 DDRGK1Q96HY6 314 aa6.87□□□□□ -1.31
SPIRE1-212ENST00000588236 LHX6Q9UPM6 363 aa6.87□□□□□ -1.31
SPIRE1-212ENST00000588236 PRIM1P49642 420 aaKnown RBP6.86□□□□□ -1.31
SPIRE1-212ENST00000588236 PPP1R3GB7ZBB8 358 aa6.85□□□□□ -1.31
SPIRE1-212ENST00000588236 PRSS12P56730 875 aa6.85□□□□□ -1.31
SPIRE1-212ENST00000588236 TSR1Q2NL82 804 aaKnown RBP6.85□□□□□ -1.31
SPIRE1-212ENST00000588236 RBM46Q8TBY0 533 aaKnown RBP6.85□□□□□ -1.31
SPIRE1-212ENST00000588236 OTUD5Q96G74 571 aa6.85□□□□□ -1.31
SPIRE1-212ENST00000588236 ADAM33Q9BZ11 813 aa6.85□□□□□ -1.31
SPIRE1-212ENST00000588236 KDM4CQ9H3R0 1056 aa6.85□□□□□ -1.31
SPIRE1-212ENST00000588236 TTC13Q8NBP0 860 aa6.84□□□□□ -1.31
SPIRE1-212ENST00000588236 GTF3C3Q9Y5Q9 886 aa6.84□□□□□ -1.31
SPIRE1-212ENST00000588236 TTLL12Q14166 644 aaPredicted RBP6.83□□□□□ -1.32
SPIRE1-212ENST00000588236 PACS2Q86VP3 889 aa6.83□□□□□ -1.32
SPIRE1-212ENST00000588236 KHSRPQ92945 711 aaKnown RBP eCLIP6.83□□□□□ -1.32
SPIRE1-212ENST00000588236 CDHR5Q9HBB8 845 aa6.83□□□□□ -1.32
SPIRE1-212ENST00000588236 FECHP22830 423 aa6.82□□□□□ -1.32
SPIRE1-212ENST00000588236 PBX2P40425 430 aa6.82□□□□□ -1.32
SPIRE1-212ENST00000588236 CDCA7LQ96GN5 454 aa6.82□□□□□ -1.32
SPIRE1-212ENST00000588236 GOPCQ9HD26 462 aa6.82□□□□□ -1.32
SPIRE1-212ENST00000588236 GPCPD1Q9NPB8 672 aa6.82□□□□□ -1.32
SPIRE1-212ENST00000588236 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.81□□□□□ -1.32
SPIRE1-212ENST00000588236 ERBB3P21860 1342 aa6.8□□□□□ -1.32
SPIRE1-212ENST00000588236 NBPF26B4DH59 902 aa6.8□□□□□ -1.32
SPIRE1-212ENST00000588236 DIXDC1Q155Q3 683 aa6.8□□□□□ -1.32
SPIRE1-212ENST00000588236 METTL3Q86U44 580 aaKnown RBP6.8□□□□□ -1.32
SPIRE1-212ENST00000588236 SLC4A5Q9BY07 1137 aa6.8□□□□□ -1.32
SPIRE1-212ENST00000588236 RSPH6AQ9H0K4 717 aa6.8□□□□□ -1.32
SPIRE1-212ENST00000588236 ADGRG1Q9Y653 693 aa6.8□□□□□ -1.32
SPIRE1-212ENST00000588236 ARHGAP33O14559 1287 aa6.79□□□□□ -1.32
SPIRE1-212ENST00000588236 RSPH4AQ5TD94 716 aa6.79□□□□□ -1.32
SPIRE1-212ENST00000588236 PADI6Q6TGC4 694 aa6.79□□□□□ -1.32
SPIRE1-212ENST00000588236 PARP9Q8IXQ6 854 aa6.79□□□□□ -1.32
SPIRE1-212ENST00000588236 PXYLP1Q8TE99 480 aa6.79□□□□□ -1.32
SPIRE1-212ENST00000588236 GPBP1L1Q9HC44 474 aaPredicted RBP6.79□□□□□ -1.32
SPIRE1-212ENST00000588236 SLC4A3P48751 1232 aa6.78□□□□□ -1.32
SPIRE1-212ENST00000588236 HDGFP51858 240 aaKnown RBP6.78□□□□□ -1.32
SPIRE1-212ENST00000588236 SULF1Q8IWU6 871 aa6.78□□□□□ -1.32
SPIRE1-212ENST00000588236 TRIM6-TRIM34B2RNG4 842 aa6.77□□□□□ -1.33
SPIRE1-212ENST00000588236 GIGYF2Q6Y7W6 1299 aaKnown RBP6.77□□□□□ -1.33
SPIRE1-212ENST00000588236 IL27Q8NEV9 243 aa6.77□□□□□ -1.33
SPIRE1-212ENST00000588236 TMUB1Q9BVT8 246 aa6.77□□□□□ -1.33
SPIRE1-212ENST00000588236 DNAJB2P25686 324 aa6.76□□□□□ -1.33
SPIRE1-212ENST00000588236 SSTR3P32745 418 aaPredicted RBP6.75□□□□□ -1.33
SPIRE1-212ENST00000588236 EMP3P54852 163 aa6.75□□□□□ -1.33
SPIRE1-212ENST00000588236 ZNF687Q8N1G0 1237 aa6.75□□□□□ -1.33
SPIRE1-212ENST00000588236 EYA1Q99502 592 aa6.75□□□□□ -1.33
SPIRE1-212ENST00000588236 COL9A1P20849 921 aa6.74□□□□□ -1.33
SPIRE1-212ENST00000588236 MDM2Q00987 491 aaPredicted RBP6.74□□□□□ -1.33
SPIRE1-212ENST00000588236 NECTIN2Q92692 538 aa6.74□□□□□ -1.33
SPIRE1-212ENST00000588236 TATDN2Q93075 761 aa6.74□□□□□ -1.33
SPIRE1-212ENST00000588236 KCNK17Q96T54 332 aa6.74□□□□□ -1.33
SPIRE1-212ENST00000588236 RABGEF1Q9UJ41 708 aa6.74□□□□□ -1.33
SPIRE1-212ENST00000588236 ST18O60284 1047 aa6.73□□□□□ -1.33
SPIRE1-212ENST00000588236 VARS2Q5ST30 1063 aaKnown RBP6.73□□□□□ -1.33
SPIRE1-212ENST00000588236 LAPTM4BQ86VI4 370 aa6.73□□□□□ -1.33
SPIRE1-212ENST00000588236 ZBED2Q9BTP6 218 aa6.73□□□□□ -1.33
SPIRE1-212ENST00000588236 FAM117AQ9C073 453 aa6.73□□□□□ -1.33
SPIRE1-212ENST00000588236 FAM217BQ9NTX9 383 aaPredicted RBP6.73□□□□□ -1.33
SPIRE1-212ENST00000588236 TK2O00142 265 aa6.72□□□□□ -1.33
SPIRE1-212ENST00000588236 NUDT18Q6ZVK8 323 aa6.72□□□□□ -1.33
SPIRE1-212ENST00000588236 PCMTD1Q96MG8 357 aaPredicted RBP6.72□□□□□ -1.33
SPIRE1-212ENST00000588236 TSKSQ9UJT2 592 aa6.72□□□□□ -1.33
SPIRE1-212ENST00000588236 PNMA3Q9UL41 463 aa6.72□□□□□ -1.33
SPIRE1-212ENST00000588236 RCCD1A6NED2 376 aa6.71□□□□□ -1.34
SPIRE1-212ENST00000588236 NBPF3Q9H094 633 aa6.71□□□□□ -1.34
SPIRE1-212ENST00000588236 SKIV2LQ15477 1246 aaKnown RBP6.7□□□□□ -1.34
SPIRE1-212ENST00000588236 SH3D19Q5HYK7 790 aa6.7□□□□□ -1.34
SPIRE1-212ENST00000588236 PHOX2BQ99453 314 aa6.7□□□□□ -1.34
SPIRE1-212ENST00000588236 BEGAINQ9BUH8 593 aa6.7□□□□□ -1.34
SPIRE1-212ENST00000588236 TMEM134Q9H6X4 195 aa6.7□□□□□ -1.34
SPIRE1-212ENST00000588236 KIAA1468Q9P260 1216 aa6.7□□□□□ -1.34
SPIRE1-212ENST00000588236 PLEKHG3A1L390 1219 aa6.69□□□□□ -1.34
SPIRE1-212ENST00000588236 MS4A1P11836 297 aa6.69□□□□□ -1.34
SPIRE1-212ENST00000588236 FAM163AQ96GL9 167 aaPredicted RBP6.69□□□□□ -1.34
SPIRE1-212ENST00000588236 GJA5P36382 358 aa6.68□□□□□ -1.34
SPIRE1-212ENST00000588236 FAM98CQ17RN3 349 aaKnown RBP6.68□□□□□ -1.34
SPIRE1-212ENST00000588236 FAM205CA6NFA0 338 aa6.67□□□□□ -1.34
SPIRE1-212ENST00000588236 USP46P62068 366 aa6.67□□□□□ -1.34
SPIRE1-212ENST00000588236 FLIIQ13045 1269 aa6.67□□□□□ -1.34
SPIRE1-212ENST00000588236 FAM161AQ3B820 660 aa6.67□□□□□ -1.34
SPIRE1-212ENST00000588236 SLF2Q8IX21 1173 aa6.67□□□□□ -1.34
SPIRE1-212ENST00000588236 STAC3Q96MF2 364 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms