RNA–Protein interactions for RNA: ENST00000588156.5

PIK3C3-208, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2

Gene PIK3C3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-208ENST00000588156 RABGEF1Q9UJ41 708 aa13.47□□□□□ -0.25
PIK3C3-208ENST00000588156 ANKK1Q8NFD2 765 aa13.42□□□□□ -0.26
PIK3C3-208ENST00000588156 RBM33Q96EV2 1170 aaKnown RBP13.42□□□□□ -0.26
PIK3C3-208ENST00000588156 BCAMP50895 628 aa13.41□□□□□ -0.26
PIK3C3-208ENST00000588156 C6orf132Q5T0Z8 1188 aa13.41□□□□□ -0.26
PIK3C3-208ENST00000588156 DDX12PQ92771 950 aa13.41□□□□□ -0.26
PIK3C3-208ENST00000588156 KIAA1468Q9P260 1216 aa13.41□□□□□ -0.26
PIK3C3-208ENST00000588156 BBXQ8WY36 941 aaPredicted RBP13.4□□□□□ -0.26
PIK3C3-208ENST00000588156 EPAS1Q99814 870 aa13.4□□□□□ -0.26
PIK3C3-208ENST00000588156 IFFO2Q5TF58 517 aa13.39□□□□□ -0.27
PIK3C3-208ENST00000588156 SEPT9Q9UHD8 586 aaPredicted RBP13.37□□□□□ -0.27
PIK3C3-208ENST00000588156 A0A0G2JS52 829 aa13.36□□□□□ -0.27
PIK3C3-208ENST00000588156 LAPTM4BQ86VI4 370 aa13.35□□□□□ -0.27
PIK3C3-208ENST00000588156 ZFRQ96KR1 1074 aaKnown RBP13.35□□□□□ -0.27
PIK3C3-208ENST00000588156 SOWAHBA6NEL2 793 aa13.33□□□□□ -0.28
PIK3C3-208ENST00000588156 TRIM6-TRIM34B2RNG4 842 aa13.32□□□□□ -0.28
PIK3C3-208ENST00000588156 ONECUT3O60422 494 aaPredicted RBP13.31□□□□□ -0.28
PIK3C3-208ENST00000588156 NBR1Q14596 966 aa13.31□□□□□ -0.28
PIK3C3-208ENST00000588156 TSR1Q2NL82 804 aaKnown RBP13.3□□□□□ -0.28
PIK3C3-208ENST00000588156 SPRYD3Q8NCJ5 442 aa13.29□□□□□ -0.28
PIK3C3-208ENST00000588156 WBP1LQ9NX94 342 aa13.29□□□□□ -0.28
PIK3C3-208ENST00000588156 MAP3K7O43318 606 aa13.28□□□□□ -0.28
PIK3C3-208ENST00000588156 RGS20O76081 388 aa13.28□□□□□ -0.28
PIK3C3-208ENST00000588156 EN1Q05925 392 aaPredicted RBP13.27□□□□□ -0.29
PIK3C3-208ENST00000588156 PDIA6Q15084 440 aa13.27□□□□□ -0.29
PIK3C3-208ENST00000588156 FAM98CQ17RN3 349 aaKnown RBP13.26□□□□□ -0.29
PIK3C3-208ENST00000588156 ITGBL1O95965 494 aaPredicted RBP13.25□□□□□ -0.29
PIK3C3-208ENST00000588156 TSKSQ9UJT2 592 aa13.24□□□□□ -0.29
PIK3C3-208ENST00000588156 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.23□□□□□ -0.29
PIK3C3-208ENST00000588156 IRX2Q9BZI1 471 aaPredicted RBP13.22□□□□□ -0.29
PIK3C3-208ENST00000588156 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.22□□□□□ -0.29
PIK3C3-208ENST00000588156 SPDYE16A6NNV3 312 aaPredicted RBP13.21□□□□□ -0.29
PIK3C3-208ENST00000588156 LRCH3Q96II8 777 aa13.21□□□□□ -0.29
PIK3C3-208ENST00000588156 CFAP44Q96MT7 982 aa13.21□□□□□ -0.29
PIK3C3-208ENST00000588156 HPS5Q9UPZ3 1129 aa13.21□□□□□ -0.29
PIK3C3-208ENST00000588156 E2F4Q16254 413 aa13.2□□□□□ -0.3
PIK3C3-208ENST00000588156 NYAP1Q6ZVC0 841 aa13.2□□□□□ -0.3
PIK3C3-208ENST00000588156 PACS2Q86VP3 889 aa13.2□□□□□ -0.3
PIK3C3-208ENST00000588156 GRXCR2A6NFK2 248 aa13.19□□□□□ -0.3
PIK3C3-208ENST00000588156 PRIM1P49642 420 aaKnown RBP13.19□□□□□ -0.3
PIK3C3-208ENST00000588156 TSR3Q9UJK0 312 aaKnown RBP13.19□□□□□ -0.3
PIK3C3-208ENST00000588156 SMAPO00193 183 aa13.18□□□□□ -0.3
PIK3C3-208ENST00000588156 PAXIP1Q6ZW49 1069 aaPredicted RBP13.18□□□□□ -0.3
PIK3C3-208ENST00000588156 KCNC4Q03721 635 aa13.16□□□□□ -0.3
PIK3C3-208ENST00000588156 CDCA7LQ96GN5 454 aa13.16□□□□□ -0.3
PIK3C3-208ENST00000588156 WDR70Q9NW82 654 aa13.15□□□□□ -0.3
PIK3C3-208ENST00000588156 FAM198AQ9UFP1 575 aa13.15□□□□□ -0.3
PIK3C3-208ENST00000588156 PRSS12P56730 875 aa13.13□□□□□ -0.31
PIK3C3-208ENST00000588156 C3orf80F5H4A9 247 aa13.12□□□□□ -0.31
PIK3C3-208ENST00000588156 AMER1Q5JTC6 1135 aaPredicted RBP13.11□□□□□ -0.31
PIK3C3-208ENST00000588156 SAMD7Q7Z3H4 446 aa13.11□□□□□ -0.31
PIK3C3-208ENST00000588156 CDHR5Q9HBB8 845 aa13.11□□□□□ -0.31
PIK3C3-208ENST00000588156 PPP4CP60510 307 aa13.1□□□□□ -0.31
PIK3C3-208ENST00000588156 RTN4Q9NQC3 1192 aaKnown RBP13.1□□□□□ -0.31
PIK3C3-208ENST00000588156 PNMA3Q9UL41 463 aa13.09□□□□□ -0.31
PIK3C3-208ENST00000588156 ARIH1Q9Y4X5 557 aaPredicted RBP13.09□□□□□ -0.31
PIK3C3-208ENST00000588156 OSBPP22059 807 aa13.07□□□□□ -0.32
PIK3C3-208ENST00000588156 CERKQ8TCT0 537 aa13.07□□□□□ -0.32
PIK3C3-208ENST00000588156 TATDN2Q93075 761 aa13.07□□□□□ -0.32
PIK3C3-208ENST00000588156 NBPF26B4DH59 902 aa13.04□□□□□ -0.32
PIK3C3-208ENST00000588156 RNF40O75150 1001 aa13.02□□□□□ -0.33
PIK3C3-208ENST00000588156 NUDT18Q6ZVK8 323 aa13.02□□□□□ -0.33
PIK3C3-208ENST00000588156 TJAP1Q5JTD0 557 aa13□□□□□ -0.33
PIK3C3-208ENST00000588156 MTRQ99707 1265 aa12.98□□□□□ -0.33
PIK3C3-208ENST00000588156 Q6ZNB5 142 aa12.97□□□□□ -0.33
PIK3C3-208ENST00000588156 PADI6Q6TGC4 694 aa12.96□□□□□ -0.33
PIK3C3-208ENST00000588156 RBM27Q9P2N5 1060 aaKnown RBP12.95□□□□□ -0.34
PIK3C3-208ENST00000588156 HDGFP51858 240 aaKnown RBP12.94□□□□□ -0.34
PIK3C3-208ENST00000588156 NPDC1Q9NQX5 325 aaPredicted RBP12.94□□□□□ -0.34
PIK3C3-208ENST00000588156 APLP1P51693 650 aa12.93□□□□□ -0.34
PIK3C3-208ENST00000588156 ZNF516Q92618 1163 aa12.93□□□□□ -0.34
PIK3C3-208ENST00000588156 IL21Q9HBE4 155 aa12.93□□□□□ -0.34
PIK3C3-208ENST00000588156 SWT1Q5T5J6 900 aaKnown RBP12.91□□□□□ -0.34
PIK3C3-208ENST00000588156 TTC13Q8NBP0 860 aa12.91□□□□□ -0.34
PIK3C3-208ENST00000588156 PPP1R18Q6NYC8 613 aa12.89□□□□□ -0.35
PIK3C3-208ENST00000588156 PRKD2Q9BZL6 878 aa12.88□□□□□ -0.35
PIK3C3-208ENST00000588156 MLLT3P42568 568 aaPredicted RBP12.87□□□□□ -0.35
PIK3C3-208ENST00000588156 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
PIK3C3-208ENST00000588156 TSHZ2Q9NRE2 1034 aa12.86□□□□□ -0.35
PIK3C3-208ENST00000588156 GFRA3O60609 400 aa12.85□□□□□ -0.35
PIK3C3-208ENST00000588156 COPS2P61201 443 aa12.85□□□□□ -0.35
PIK3C3-208ENST00000588156 SLF2Q8IX21 1173 aa12.84□□□□□ -0.35
PIK3C3-208ENST00000588156 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.83□□□□□ -0.36
PIK3C3-208ENST00000588156 KCNV2Q8TDN2 545 aa12.82□□□□□ -0.36
PIK3C3-208ENST00000588156 EYA1Q99502 592 aa12.82□□□□□ -0.36
PIK3C3-208ENST00000588156 LAPTM4AQ15012 233 aa12.81□□□□□ -0.36
PIK3C3-208ENST00000588156 ARHGEF1Q92888 912 aaKnown RBP12.81□□□□□ -0.36
PIK3C3-208ENST00000588156 LCE2BO14633 110 aa12.79□□□□□ -0.36
PIK3C3-208ENST00000588156 NECTIN2Q92692 538 aa12.79□□□□□ -0.36
PIK3C3-208ENST00000588156 SLC4A3P48751 1232 aa12.76□□□□□ -0.37
PIK3C3-208ENST00000588156 V9GY48 417 aaPredicted RBP12.76□□□□□ -0.37
PIK3C3-208ENST00000588156 PTGDRQ13258 359 aa12.75□□□□□ -0.37
PIK3C3-208ENST00000588156 TRAF7Q6Q0C0 670 aa12.74□□□□□ -0.37
PIK3C3-208ENST00000588156 ZPR1O75312 459 aa12.73□□□□□ -0.37
PIK3C3-208ENST00000588156 PCDHB3Q9Y5E6 796 aa12.73□□□□□ -0.37
PIK3C3-208ENST00000588156 NRG2O14511 850 aaPredicted RBP12.72□□□□□ -0.37
PIK3C3-208ENST00000588156 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
PIK3C3-208ENST00000588156 NUTM2FA1L443 756 aa12.71□□□□□ -0.37
PIK3C3-208ENST00000588156 DNAJB2P25686 324 aa12.71□□□□□ -0.37
PIK3C3-208ENST00000588156 GGCXP38435 758 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms