RNA–Protein interactions for RNA: ENST00000587877.1

LINC01478-201, Transcript of long intergenic non-protein coding RNA 1478, humanhuman

TSL 1 (best) BASIC

Gene LINC01478, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01478-201ENST00000587877 KIAA0556O60303 1618 aa7.87□□□□□ -1.15
LINC01478-201ENST00000587877 UHRF1BP1Q6BDS2 1440 aa7.87□□□□□ -1.15
LINC01478-201ENST00000587877 NUP153P49790 1475 aaKnown RBP7.87□□□□□ -1.15
LINC01478-201ENST00000587877 ADGBQ8N7X0 1667 aa7.86□□□□□ -1.15
LINC01478-201ENST00000587877 ITSN2Q9NZM3 1697 aa7.86□□□□□ -1.15
LINC01478-201ENST00000587877 TROQ12816 1431 aaPredicted RBP7.86□□□□□ -1.15
LINC01478-201ENST00000587877 ARHGEF12Q9NZN5 1544 aa7.86□□□□□ -1.15
LINC01478-201ENST00000587877 CLEC11AQ9Y240 323 aa7.86□□□□□ -1.15
LINC01478-201ENST00000587877 RAPGEF6Q8TEU7 1601 aa7.86□□□□□ -1.15
LINC01478-201ENST00000587877 USP47Q96K76 1375 aa7.86□□□□□ -1.15
LINC01478-201ENST00000587877 DISP1Q96F81 1524 aa7.85□□□□□ -1.15
LINC01478-201ENST00000587877 B4GALNT3Q6L9W6 998 aa7.85□□□□□ -1.15
LINC01478-201ENST00000587877 RALGAPBQ86X10 1494 aa7.85□□□□□ -1.15
LINC01478-201ENST00000587877 CAMSAP2Q08AD1 1489 aa7.84□□□□□ -1.15
LINC01478-201ENST00000587877 IFT140Q96RY7 1462 aa7.84□□□□□ -1.15
LINC01478-201ENST00000587877 MRC2Q9UBG0 1479 aa7.84□□□□□ -1.15
LINC01478-201ENST00000587877 KDM5CP41229 1560 aa7.84□□□□□ -1.15
LINC01478-201ENST00000587877 ADCY10Q96PN6 1610 aa7.84□□□□□ -1.15
LINC01478-201ENST00000587877 PROM2Q8N271 834 aa7.84□□□□□ -1.15
LINC01478-201ENST00000587877 NOP58Q9Y2X3 529 aaKnown RBP7.84□□□□□ -1.15
LINC01478-201ENST00000587877 ANKRD30AQ9BXX3 1397 aa7.83□□□□□ -1.16
LINC01478-201ENST00000587877 SHANK2Q9UPX8 1470 aa7.83□□□□□ -1.16
LINC01478-201ENST00000587877 CROCC2H7BZ55 1655 aa7.83□□□□□ -1.16
LINC01478-201ENST00000587877 KDM5DQ9BY66 1539 aa7.83□□□□□ -1.16
LINC01478-201ENST00000587877 KIF15Q9NS87 1388 aa7.83□□□□□ -1.16
LINC01478-201ENST00000587877 PRKAR2AP13861 404 aaKnown RBP7.83□□□□□ -1.16
LINC01478-201ENST00000587877 EVX2Q03828 476 aa7.83□□□□□ -1.16
LINC01478-201ENST00000587877 BRD4O60885 1362 aaPredicted RBP7.82□□□□□ -1.16
LINC01478-201ENST00000587877 LRPPRCP42704 1394 aaKnown RBP7.82□□□□□ -1.16
LINC01478-201ENST00000587877 GPATCH8Q9UKJ3 1502 aaKnown RBP7.82□□□□□ -1.16
LINC01478-201ENST00000587877 PNISRQ8TF01 805 aaKnown RBP7.82□□□□□ -1.16
LINC01478-201ENST00000587877 BCORL1Q5H9F3 1711 aa7.81□□□□□ -1.16
LINC01478-201ENST00000587877 INSRP06213 1382 aa7.81□□□□□ -1.16
LINC01478-201ENST00000587877 ANP32AP39687 249 aaKnown RBP7.81□□□□□ -1.16
LINC01478-201ENST00000587877 RALBP1Q15311 655 aa7.81□□□□□ -1.16
LINC01478-201ENST00000587877 CCDC136Q96JN2 1154 aa7.81□□□□□ -1.16
LINC01478-201ENST00000587877 CFDP1Q9UEE9 299 aaPredicted RBP7.81□□□□□ -1.16
LINC01478-201ENST00000587877 ZNF644Q9H582 1327 aaPredicted RBP7.8□□□□□ -1.16
LINC01478-201ENST00000587877 ZMYM4Q5VZL5 1548 aa7.8□□□□□ -1.16
LINC01478-201ENST00000587877 GRIN2AQ12879 1464 aa7.8□□□□□ -1.16
LINC01478-201ENST00000587877 ANKRD50Q9ULJ7 1429 aa7.8□□□□□ -1.16
LINC01478-201ENST00000587877 MYBBP1AQ9BQG0 1328 aaKnown RBP7.79□□□□□ -1.16
LINC01478-201ENST00000587877 PDE3BQ13370 1112 aa7.79□□□□□ -1.16
LINC01478-201ENST00000587877 TMC1Q8TDI8 760 aa7.79□□□□□ -1.16
LINC01478-201ENST00000587877 IPO9Q96P70 1041 aaKnown RBP7.79□□□□□ -1.16
LINC01478-201ENST00000587877 PTPRGP23470 1445 aa7.79□□□□□ -1.16
LINC01478-201ENST00000587877 PKD2Q13563 968 aa7.79□□□□□ -1.16
LINC01478-201ENST00000587877 PRG4Q92954 1404 aaPredicted RBP7.78□□□□□ -1.16
LINC01478-201ENST00000587877 GABBR2O75899 941 aa7.78□□□□□ -1.16
LINC01478-201ENST00000587877 DEKP35659 375 aaKnown RBP7.78□□□□□ -1.16
LINC01478-201ENST00000587877 RTN4Q9NQC3 1192 aaKnown RBP7.78□□□□□ -1.16
LINC01478-201ENST00000587877 MAGI1Q96QZ7 1491 aaPredicted RBP7.78□□□□□ -1.16
LINC01478-201ENST00000587877 CEP170Q5SW79 1584 aa7.77□□□□□ -1.16
LINC01478-201ENST00000587877 E9PCH4 1651 aa7.77□□□□□ -1.17
LINC01478-201ENST00000587877 CARMIL2Q6F5E8 1435 aa7.77□□□□□ -1.17
LINC01478-201ENST00000587877 TCERG1O14776 1098 aaKnown RBP7.77□□□□□ -1.17
LINC01478-201ENST00000587877 CARD11Q9BXL7 1154 aa7.77□□□□□ -1.17
LINC01478-201ENST00000587877 WASHC2CQ9Y4E1 1318 aa7.76□□□□□ -1.17
LINC01478-201ENST00000587877 C9orf84Q5VXU9 1444 aa7.76□□□□□ -1.17
LINC01478-201ENST00000587877 MS4A1P11836 297 aa7.76□□□□□ -1.17
LINC01478-201ENST00000587877 ARHGEF5Q12774 1597 aa7.76□□□□□ -1.17
LINC01478-201ENST00000587877 RRP1P56182 461 aaKnown RBP7.75□□□□□ -1.17
LINC01478-201ENST00000587877 ZBTB47Q9UFB7 747 aaPredicted RBP7.75□□□□□ -1.17
LINC01478-201ENST00000587877 ABCC10Q5T3U5 1492 aa7.75□□□□□ -1.17
LINC01478-201ENST00000587877 NUP155O75694 1391 aa7.75□□□□□ -1.17
LINC01478-201ENST00000587877 PARD3Q8TEW0 1356 aa7.75□□□□□ -1.17
LINC01478-201ENST00000587877 ARID3CA6NKF2 412 aa7.75□□□□□ -1.17
LINC01478-201ENST00000587877 NLRP13Q86W25 1043 aa7.75□□□□□ -1.17
LINC01478-201ENST00000587877 ZNF608Q9ULD9 1512 aaPredicted RBP7.75□□□□□ -1.17
LINC01478-201ENST00000587877 PLEKHH2Q8IVE3 1493 aa7.74□□□□□ -1.17
LINC01478-201ENST00000587877 LAMC1P11047 1609 aa7.74□□□□□ -1.17
LINC01478-201ENST00000587877 C19orf67A6NJJ6 358 aa7.74□□□□□ -1.17
LINC01478-201ENST00000587877 RTL5Q5HYW3 569 aaPredicted RBP7.74□□□□□ -1.17
LINC01478-201ENST00000587877 SYNJ2O15056 1496 aa7.74□□□□□ -1.17
LINC01478-201ENST00000587877 PLB1Q6P1J6 1458 aa7.74□□□□□ -1.17
LINC01478-201ENST00000587877 GPRASP1Q5JY77 1395 aa7.74□□□□□ -1.17
LINC01478-201ENST00000587877 PAK3O75914 559 aaPredicted RBP7.74□□□□□ -1.17
LINC01478-201ENST00000587877 EIF4G3O43432 1585 aaKnown RBP7.73□□□□□ -1.17
LINC01478-201ENST00000587877 ABCA8O94911 1581 aa7.73□□□□□ -1.17
LINC01478-201ENST00000587877 PRR29P0C7W0 189 aa7.73□□□□□ -1.17
LINC01478-201ENST00000587877 CDC42BPAQ5VT25 1732 aa7.73□□□□□ -1.17
LINC01478-201ENST00000587877 USP35Q9P2H5 1018 aa7.73□□□□□ -1.17
LINC01478-201ENST00000587877 RCAN3Q9UKA8 241 aa7.73□□□□□ -1.17
LINC01478-201ENST00000587877 NUP160Q12769 1436 aa7.72□□□□□ -1.17
LINC01478-201ENST00000587877 TSPY4P0CV99 314 aa7.72□□□□□ -1.17
LINC01478-201ENST00000587877 TSPY10P0CW01 314 aa7.72□□□□□ -1.17
LINC01478-201ENST00000587877 ZNF326Q5BKZ1 582 aaKnown RBP7.72□□□□□ -1.17
LINC01478-201ENST00000587877 RSPH4AQ5TD94 716 aa7.72□□□□□ -1.17
LINC01478-201ENST00000587877 ST20-MTHFSA0A0A6YYL1 179 aa7.72□□□□□ -1.17
LINC01478-201ENST00000587877 PLEKHD1A6NEE1 506 aa7.72□□□□□ -1.17
LINC01478-201ENST00000587877 POLR3GLQ9BT43 218 aa7.72□□□□□ -1.17
LINC01478-201ENST00000587877 BLMP54132 1417 aaPredicted RBP7.71□□□□□ -1.17
LINC01478-201ENST00000587877 PRAG1Q86YV5 1406 aa7.71□□□□□ -1.17
LINC01478-201ENST00000587877 CHADLQ6NUI6 762 aa7.71□□□□□ -1.18
LINC01478-201ENST00000587877 ZNF777Q9ULD5 760 aaPredicted RBP7.71□□□□□ -1.18
LINC01478-201ENST00000587877 TRPM1Q7Z4N2 1603 aa7.7□□□□□ -1.18
LINC01478-201ENST00000587877 CCDC141Q6ZP82 1450 aa7.7□□□□□ -1.18
LINC01478-201ENST00000587877 COL17A1Q9UMD9 1497 aaPredicted RBP7.7□□□□□ -1.18
LINC01478-201ENST00000587877 EIF2AK4Q9P2K8 1649 aaKnown RBP7.7□□□□□ -1.18
LINC01478-201ENST00000587877 ATP10BO94823 1461 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms