RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 MLLT3P42568 568 aaPredicted RBP8.81□□□□□ -1
PPP4R1-229ENST00000584754 PRIM1P49642 420 aaKnown RBP8.81□□□□□ -1
PPP4R1-229ENST00000584754 ARHGEF1Q92888 912 aaKnown RBP8.81□□□□□ -1
PPP4R1-229ENST00000584754 KCNH8Q96L42 1107 aa8.81□□□□□ -1
PPP4R1-229ENST00000584754 PHF14O94880 888 aa8.8□□□□□ -1
PPP4R1-229ENST00000584754 NBR1Q14596 966 aa8.8□□□□□ -1
PPP4R1-229ENST00000584754 TK2O00142 265 aa8.79□□□□□ -1
PPP4R1-229ENST00000584754 SEMA3EO15041 775 aa8.79□□□□□ -1
PPP4R1-229ENST00000584754 TYW1BQ6NUM6 668 aa8.79□□□□□ -1
PPP4R1-229ENST00000584754 KCTD12Q96CX2 325 aaKnown RBP8.79□□□□□ -1
PPP4R1-229ENST00000584754 BCL2L12Q9HB09 334 aa8.78□□□□□ -1
PPP4R1-229ENST00000584754 COL9A1P20849 921 aa8.77□□□□□ -1.01
PPP4R1-229ENST00000584754 TSR1Q2NL82 804 aaKnown RBP8.77□□□□□ -1.01
PPP4R1-229ENST00000584754 PTPREP23469 700 aa8.76□□□□□ -1.01
PPP4R1-229ENST00000584754 P3H3Q8IVL6 736 aa8.76□□□□□ -1.01
PPP4R1-229ENST00000584754 HRO43593 1189 aa8.75□□□□□ -1.01
PPP4R1-229ENST00000584754 OSBPP22059 807 aa8.75□□□□□ -1.01
PPP4R1-229ENST00000584754 C6orf132Q5T0Z8 1188 aa8.75□□□□□ -1.01
PPP4R1-229ENST00000584754 EPAS1Q99814 870 aa8.75□□□□□ -1.01
PPP4R1-229ENST00000584754 MAP3K7O43318 606 aa8.74□□□□□ -1.01
PPP4R1-229ENST00000584754 FBXW7Q969H0 707 aa8.74□□□□□ -1.01
PPP4R1-229ENST00000584754 PTPN5P54829 565 aa8.72□□□□□ -1.01
PPP4R1-229ENST00000584754 EN1Q05925 392 aaPredicted RBP8.72□□□□□ -1.01
PPP4R1-229ENST00000584754 PROX2Q3B8N5 592 aa8.72□□□□□ -1.01
PPP4R1-229ENST00000584754 CDHR5Q9HBB8 845 aa8.71□□□□□ -1.02
PPP4R1-229ENST00000584754 VPS9D1Q9Y2B5 631 aa8.71□□□□□ -1.02
PPP4R1-229ENST00000584754 ZBED2Q9BTP6 218 aa8.7□□□□□ -1.02
PPP4R1-229ENST00000584754 PPP1R3GB7ZBB8 358 aa8.68□□□□□ -1.02
PPP4R1-229ENST00000584754 GOLGA8CPA6NN73 597 aa8.67□□□□□ -1.02
PPP4R1-229ENST00000584754 TESPA1A2RU30 521 aaPredicted RBP8.66□□□□□ -1.02
PPP4R1-229ENST00000584754 RBM26Q5T8P6 1007 aaKnown RBP8.66□□□□□ -1.02
PPP4R1-229ENST00000584754 NPDC1Q9NQX5 325 aaPredicted RBP8.64□□□□□ -1.03
PPP4R1-229ENST00000584754 KIAA1468Q9P260 1216 aa8.64□□□□□ -1.03
PPP4R1-229ENST00000584754 NUTM2FA1L443 756 aa8.63□□□□□ -1.03
PPP4R1-229ENST00000584754 FAM198AQ9UFP1 575 aa8.63□□□□□ -1.03
PPP4R1-229ENST00000584754 BHMG1C9JSJ3 638 aaPredicted RBP8.62□□□□□ -1.03
PPP4R1-229ENST00000584754 C3orf80F5H4A9 247 aa8.62□□□□□ -1.03
PPP4R1-229ENST00000584754 SLC4A5Q9BY07 1137 aa8.62□□□□□ -1.03
PPP4R1-229ENST00000584754 TSKSQ9UJT2 592 aa8.62□□□□□ -1.03
PPP4R1-229ENST00000584754 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
PPP4R1-229ENST00000584754 WNT2BQ93097 391 aa8.61□□□□□ -1.03
PPP4R1-229ENST00000584754 CDCA7LQ96GN5 454 aa8.61□□□□□ -1.03
PPP4R1-229ENST00000584754 SEPT9Q9UHD8 586 aaPredicted RBP8.61□□□□□ -1.03
PPP4R1-229ENST00000584754 TRIM6-TRIM34B2RNG4 842 aa8.6□□□□□ -1.03
PPP4R1-229ENST00000584754 SMAPO00193 183 aa8.6□□□□□ -1.03
PPP4R1-229ENST00000584754 PRSS12P56730 875 aa8.59□□□□□ -1.03
PPP4R1-229ENST00000584754 THSD4Q6ZMP0 1018 aa8.59□□□□□ -1.03
PPP4R1-229ENST00000584754 RABGEF1Q9UJ41 708 aa8.58□□□□□ -1.04
PPP4R1-229ENST00000584754 FAM161AQ3B820 660 aa8.57□□□□□ -1.04
PPP4R1-229ENST00000584754 PADI6Q6TGC4 694 aa8.57□□□□□ -1.04
PPP4R1-229ENST00000584754 PTGDRQ13258 359 aa8.56□□□□□ -1.04
PPP4R1-229ENST00000584754 NBPF3Q9H094 633 aa8.56□□□□□ -1.04
PPP4R1-229ENST00000584754 SMYD5Q6GMV2 418 aa8.55□□□□□ -1.04
PPP4R1-229ENST00000584754 IRX2Q9BZI1 471 aaPredicted RBP8.55□□□□□ -1.04
PPP4R1-229ENST00000584754 PACS2Q86VP3 889 aa8.54□□□□□ -1.04
PPP4R1-229ENST00000584754 CERKQ8TCT0 537 aa8.54□□□□□ -1.04
PPP4R1-229ENST00000584754 RGS20O76081 388 aa8.53□□□□□ -1.04
PPP4R1-229ENST00000584754 FECHP22830 423 aa8.53□□□□□ -1.04
PPP4R1-229ENST00000584754 NUDT18Q6ZVK8 323 aa8.53□□□□□ -1.04
PPP4R1-229ENST00000584754 PNMA3Q9UL41 463 aa8.53□□□□□ -1.04
PPP4R1-229ENST00000584754 ONECUT3O60422 494 aaPredicted RBP8.52□□□□□ -1.05
PPP4R1-229ENST00000584754 IFFO2Q5TF58 517 aa8.52□□□□□ -1.05
PPP4R1-229ENST00000584754 TATDN2Q93075 761 aa8.52□□□□□ -1.05
PPP4R1-229ENST00000584754 A0A0G2JS52 829 aa8.51□□□□□ -1.05
PPP4R1-229ENST00000584754 FCHSD2O94868 740 aa8.51□□□□□ -1.05
PPP4R1-229ENST00000584754 BCAMP50895 628 aa8.51□□□□□ -1.05
PPP4R1-229ENST00000584754 TTC13Q8NBP0 860 aa8.51□□□□□ -1.05
PPP4R1-229ENST00000584754 ZFRQ96KR1 1074 aaKnown RBP8.51□□□□□ -1.05
PPP4R1-229ENST00000584754 GPR37O15354 613 aa8.5□□□□□ -1.05
PPP4R1-229ENST00000584754 TULP1O00294 542 aaPredicted RBP8.49□□□□□ -1.05
PPP4R1-229ENST00000584754 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.49□□□□□ -1.05
PPP4R1-229ENST00000584754 GPIHBP1Q8IV16 184 aa8.49□□□□□ -1.05
PPP4R1-229ENST00000584754 ANKK1Q8NFD2 765 aa8.49□□□□□ -1.05
PPP4R1-229ENST00000584754 FAM98CQ17RN3 349 aaKnown RBP8.48□□□□□ -1.05
PPP4R1-229ENST00000584754 NBPF26B4DH59 902 aa8.47□□□□□ -1.05
PPP4R1-229ENST00000584754 LAPTM4BQ86VI4 370 aa8.47□□□□□ -1.05
PPP4R1-229ENST00000584754 SAMD7Q7Z3H4 446 aa8.46□□□□□ -1.06
PPP4R1-229ENST00000584754 RBM27Q9P2N5 1060 aaKnown RBP8.46□□□□□ -1.06
PPP4R1-229ENST00000584754 ADGRG1Q9Y653 693 aa8.46□□□□□ -1.06
PPP4R1-229ENST00000584754 LMOD2Q6P5Q4 547 aa8.45□□□□□ -1.06
PPP4R1-229ENST00000584754 EYA1Q99502 592 aa8.45□□□□□ -1.06
PPP4R1-229ENST00000584754 SOWAHBA6NEL2 793 aa8.44□□□□□ -1.06
PPP4R1-229ENST00000584754 GNPATO15228 680 aa8.44□□□□□ -1.06
PPP4R1-229ENST00000584754 HIC1Q14526 733 aa8.44□□□□□ -1.06
PPP4R1-229ENST00000584754 NLRP7Q8WX94 980 aa8.44□□□□□ -1.06
PPP4R1-229ENST00000584754 WBP1LQ9NX94 342 aa8.43□□□□□ -1.06
PPP4R1-229ENST00000584754 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.43□□□□□ -1.06
PPP4R1-229ENST00000584754 RNF40O75150 1001 aa8.42□□□□□ -1.06
PPP4R1-229ENST00000584754 SWT1Q5T5J6 900 aaKnown RBP8.42□□□□□ -1.06
PPP4R1-229ENST00000584754 LRCH3Q96II8 777 aa8.42□□□□□ -1.06
PPP4R1-229ENST00000584754 HPS5Q9UPZ3 1129 aa8.41□□□□□ -1.06
PPP4R1-229ENST00000584754 RBM46Q8TBY0 533 aaKnown RBP8.4□□□□□ -1.06
PPP4R1-229ENST00000584754 RCCD1A6NED2 376 aa8.39□□□□□ -1.07
PPP4R1-229ENST00000584754 Q6ZNB5 142 aa8.39□□□□□ -1.07
PPP4R1-229ENST00000584754 PHOX2BQ99453 314 aa8.39□□□□□ -1.07
PPP4R1-229ENST00000584754 ITGBL1O95965 494 aaPredicted RBP8.38□□□□□ -1.07
PPP4R1-229ENST00000584754 PPP4CP60510 307 aa8.37□□□□□ -1.07
PPP4R1-229ENST00000584754 KCNC4Q03721 635 aa8.37□□□□□ -1.07
PPP4R1-229ENST00000584754 NYAP1Q6ZVC0 841 aa8.37□□□□□ -1.07
PPP4R1-229ENST00000584754 METTL3Q86U44 580 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms