RNA–Protein interactions for RNA: ENST00000584601.5

ERBB2-219, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-219ENST00000584601 NUTM2DQ5VT03 806 aaPredicted RBP15.47■□□□□ 0.07
ERBB2-219ENST00000584601 TERF2IPQ9NYB0 399 aa15.47■□□□□ 0.07
ERBB2-219ENST00000584601 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
ERBB2-219ENST00000584601 EHBP1L1Q8N3D4 1523 aa15.47■□□□□ 0.07
ERBB2-219ENST00000584601 PANK3Q9H999 370 aa15.47■□□□□ 0.07
ERBB2-219ENST00000584601 GSE1Q14687 1217 aa15.47■□□□□ 0.07
ERBB2-219ENST00000584601 TRAK1Q9UPV9 953 aa15.47■□□□□ 0.07
ERBB2-219ENST00000584601 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
ERBB2-219ENST00000584601 SLC4A3P48751 1232 aa15.45■□□□□ 0.06
ERBB2-219ENST00000584601 PLIN1O60240 522 aa15.45■□□□□ 0.06
ERBB2-219ENST00000584601 RWDD1Q9H446 243 aaPredicted RBP15.44■□□□□ 0.06
ERBB2-219ENST00000584601 ABCA10Q8WWZ4 1543 aa15.44■□□□□ 0.06
ERBB2-219ENST00000584601 CCDC7Q96M83 1385 aa15.43■□□□□ 0.06
ERBB2-219ENST00000584601 MSNP26038 577 aaKnown RBP15.43■□□□□ 0.06
ERBB2-219ENST00000584601 CENPQQ7L2Z9 268 aaPredicted RBP15.43■□□□□ 0.06
ERBB2-219ENST00000584601 SYNJ2O15056 1496 aa15.43■□□□□ 0.06
ERBB2-219ENST00000584601 FAM161AQ3B820 660 aa15.43■□□□□ 0.06
ERBB2-219ENST00000584601 WASHC2AQ641Q2 1341 aa15.42■□□□□ 0.06
ERBB2-219ENST00000584601 GOLGA6L3A6NEY3 463 aa15.42■□□□□ 0.06
ERBB2-219ENST00000584601 IPO8O15397 1037 aaKnown RBP15.42■□□□□ 0.06
ERBB2-219ENST00000584601 MIA2Q96PC5 1412 aa15.42■□□□□ 0.06
ERBB2-219ENST00000584601 CALD1Q05682 793 aaKnown RBP15.42■□□□□ 0.06
ERBB2-219ENST00000584601 TPRNQ4KMQ1 711 aa15.42■□□□□ 0.06
ERBB2-219ENST00000584601 GBP4Q96PP9 640 aa15.41■□□□□ 0.06
ERBB2-219ENST00000584601 VGFO15240 615 aaPredicted RBP15.41■□□□□ 0.06
ERBB2-219ENST00000584601 PMFBP1Q8TBY8 1022 aa15.41■□□□□ 0.06
ERBB2-219ENST00000584601 RTF1Q92541 710 aaKnown RBP15.41■□□□□ 0.06
ERBB2-219ENST00000584601 CRBNQ96SW2 442 aa15.41■□□□□ 0.06
ERBB2-219ENST00000584601 PRG4Q92954 1404 aaPredicted RBP15.41■□□□□ 0.06
ERBB2-219ENST00000584601 CCDC146Q8IYE0 955 aa15.41■□□□□ 0.06
ERBB2-219ENST00000584601 CNTLNQ9NXG0 1405 aa15.4■□□□□ 0.06
ERBB2-219ENST00000584601 HECW1Q76N89 1606 aa15.4■□□□□ 0.06
ERBB2-219ENST00000584601 KIF7Q2M1P5 1343 aa15.4■□□□□ 0.06
ERBB2-219ENST00000584601 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
ERBB2-219ENST00000584601 PLCB2Q00722 1185 aa15.39■□□□□ 0.05
ERBB2-219ENST00000584601 HFM1A2PYH4 1435 aa15.39■□□□□ 0.05
ERBB2-219ENST00000584601 LAMC3Q9Y6N6 1575 aa15.38■□□□□ 0.05
ERBB2-219ENST00000584601 CYB5RLQ6IPT4 315 aa15.37■□□□□ 0.05
ERBB2-219ENST00000584601 TROQ12816 1431 aaPredicted RBP15.37■□□□□ 0.05
ERBB2-219ENST00000584601 STAC3Q96MF2 364 aa15.37■□□□□ 0.05
ERBB2-219ENST00000584601 ARHGAP5Q13017 1502 aa15.37■□□□□ 0.05
ERBB2-219ENST00000584601 MFAP1P55081 439 aaKnown RBP15.37■□□□□ 0.05
ERBB2-219ENST00000584601 EID1Q9Y6B2 187 aa15.37■□□□□ 0.05
ERBB2-219ENST00000584601 CENPJQ9HC77 1338 aaPredicted RBP15.37■□□□□ 0.05
ERBB2-219ENST00000584601 UNC13AQ9UPW8 1703 aa15.36■□□□□ 0.05
ERBB2-219ENST00000584601 CLUAP1Q96AJ1 413 aa15.36■□□□□ 0.05
ERBB2-219ENST00000584601 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.36■□□□□ 0.05
ERBB2-219ENST00000584601 OS9Q13438 667 aaPredicted RBP15.35■□□□□ 0.05
ERBB2-219ENST00000584601 EVC2Q86UK5 1308 aa15.35■□□□□ 0.05
ERBB2-219ENST00000584601 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
ERBB2-219ENST00000584601 ITPRIPQ8IWB1 547 aa15.35■□□□□ 0.05
ERBB2-219ENST00000584601 PTMSP20962 102 aa15.34■□□□□ 0.05
ERBB2-219ENST00000584601 RSPH6AQ9H0K4 717 aa15.34■□□□□ 0.05
ERBB2-219ENST00000584601 SUPT6HQ7KZ85 1726 aaKnown RBP15.34■□□□□ 0.05
ERBB2-219ENST00000584601 CUL7Q14999 1698 aa15.33■□□□□ 0.04
ERBB2-219ENST00000584601 KIAA0586Q9BVV6 1533 aa15.33■□□□□ 0.04
ERBB2-219ENST00000584601 CGNL1Q0VF96 1302 aa15.33■□□□□ 0.04
ERBB2-219ENST00000584601 SMC4Q9NTJ3 1288 aa15.32■□□□□ 0.04
ERBB2-219ENST00000584601 CFAP44Q96MT7 982 aa15.32■□□□□ 0.04
ERBB2-219ENST00000584601 PCF11O94913 1555 aaKnown RBP15.32■□□□□ 0.04
ERBB2-219ENST00000584601 C9orf84Q5VXU9 1444 aa15.32■□□□□ 0.04
ERBB2-219ENST00000584601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.32■□□□□ 0.04
ERBB2-219ENST00000584601 BIVM-ERCC5R4GMW8 1640 aa15.31■□□□□ 0.04
ERBB2-219ENST00000584601 EPRSP07814 1512 aaKnown RBP15.31■□□□□ 0.04
ERBB2-219ENST00000584601 AFAP1Q8N556 730 aa15.31■□□□□ 0.04
ERBB2-219ENST00000584601 IQGAP2Q13576 1575 aa15.3■□□□□ 0.04
ERBB2-219ENST00000584601 DAPK1P53355 1430 aa15.29■□□□□ 0.04
ERBB2-219ENST00000584601 KIAA1107Q9UPP5 1409 aa15.29■□□□□ 0.04
ERBB2-219ENST00000584601 NFKBIBQ15653 356 aa15.29■□□□□ 0.04
ERBB2-219ENST00000584601 NGDNQ8NEJ9 315 aaKnown RBP15.29■□□□□ 0.04
ERBB2-219ENST00000584601 CDK13Q14004 1512 aaKnown RBP15.28■□□□□ 0.04
ERBB2-219ENST00000584601 LMOD3Q0VAK6 560 aa15.28■□□□□ 0.04
ERBB2-219ENST00000584601 MAP3K1Q13233 1512 aa15.28■□□□□ 0.04
ERBB2-219ENST00000584601 MSH5O43196 834 aa15.28■□□□□ 0.04
ERBB2-219ENST00000584601 ZRSR1Q15695 479 aaKnown RBP15.28■□□□□ 0.04
ERBB2-219ENST00000584601 RRP7AQ9Y3A4 280 aaKnown RBP15.28■□□□□ 0.04
ERBB2-219ENST00000584601 PLEKHH2Q8IVE3 1493 aa15.27■□□□□ 0.03
ERBB2-219ENST00000584601 MINK1Q8N4C8 1332 aaPredicted RBP15.27■□□□□ 0.03
ERBB2-219ENST00000584601 WDR97A6NE52 1622 aa15.26■□□□□ 0.03
ERBB2-219ENST00000584601 E9PSI1 815 aa15.26■□□□□ 0.03
ERBB2-219ENST00000584601 COG6Q9Y2V7 657 aa15.26■□□□□ 0.03
ERBB2-219ENST00000584601 CHAF1AQ13111 956 aaPredicted RBP15.25■□□□□ 0.03
ERBB2-219ENST00000584601 NAIPQ13075 1403 aa15.25■□□□□ 0.03
ERBB2-219ENST00000584601 MCCP23508 829 aa15.25■□□□□ 0.03
ERBB2-219ENST00000584601 NUTM2FA1L443 756 aa15.25■□□□□ 0.03
ERBB2-219ENST00000584601 CCDC184Q52MB2 194 aa15.25■□□□□ 0.03
ERBB2-219ENST00000584601 DDX11L8A8MPP1 907 aa15.24■□□□□ 0.03
ERBB2-219ENST00000584601 APBB1O00213 710 aa15.24■□□□□ 0.03
ERBB2-219ENST00000584601 APAF1O14727 1248 aa15.24■□□□□ 0.03
ERBB2-219ENST00000584601 HSP90AA2PQ14568 343 aaPredicted RBP15.24■□□□□ 0.03
ERBB2-219ENST00000584601 FAM69CQ0P6D2 419 aa15.24■□□□□ 0.03
ERBB2-219ENST00000584601 STK31Q9BXU1 1019 aa15.24■□□□□ 0.03
ERBB2-219ENST00000584601 AKNAQ7Z591 1439 aa15.24■□□□□ 0.03
ERBB2-219ENST00000584601 KCNJ4P48050 445 aa15.24■□□□□ 0.03
ERBB2-219ENST00000584601 CHMP4AQ9BY43 222 aa15.24■□□□□ 0.03
ERBB2-219ENST00000584601 BCL2L13Q9BXK5 485 aa15.23■□□□□ 0.03
ERBB2-219ENST00000584601 AMPHP49418 695 aa15.23■□□□□ 0.03
ERBB2-219ENST00000584601 NBPF8Q3BBV2 869 aa15.23■□□□□ 0.03
ERBB2-219ENST00000584601 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
ERBB2-219ENST00000584601 NGEFQ8N5V2 710 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms