RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 ADCY10Q96PN6 1610 aa15.86■□□□□ 0.13
CDK5RAP3-231ENST00000584063 RBM10P98175 930 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-231ENST00000584063 ZNF326Q5BKZ1 582 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-231ENST00000584063 ABCC10Q5T3U5 1492 aa15.85■□□□□ 0.13
CDK5RAP3-231ENST00000584063 ANKRD30AQ9BXX3 1397 aa15.85■□□□□ 0.13
CDK5RAP3-231ENST00000584063 ARHGAP5Q13017 1502 aa15.84■□□□□ 0.13
CDK5RAP3-231ENST00000584063 NCOA1Q15788 1441 aa15.84■□□□□ 0.13
CDK5RAP3-231ENST00000584063 EIF4G2P78344 907 aaKnown RBP eCLIP15.84■□□□□ 0.13
CDK5RAP3-231ENST00000584063 AKNAQ7Z591 1439 aa15.83■□□□□ 0.12
CDK5RAP3-231ENST00000584063 CDC42BPAQ5VT25 1732 aa15.83■□□□□ 0.12
CDK5RAP3-231ENST00000584063 EFCAB2Q5VUJ9 269 aa15.83■□□□□ 0.12
CDK5RAP3-231ENST00000584063 TTC37Q6PGP7 1564 aa15.83■□□□□ 0.12
CDK5RAP3-231ENST00000584063 MSH5O43196 834 aa15.82■□□□□ 0.12
CDK5RAP3-231ENST00000584063 AFAP1Q8N556 730 aa15.82■□□□□ 0.12
CDK5RAP3-231ENST00000584063 PKD2Q13563 968 aa15.81■□□□□ 0.12
CDK5RAP3-231ENST00000584063 RSPH4AQ5TD94 716 aa15.81■□□□□ 0.12
CDK5RAP3-231ENST00000584063 C9orf84Q5VXU9 1444 aa15.81■□□□□ 0.12
CDK5RAP3-231ENST00000584063 ANKRD30BQ9BXX2 1392 aa15.81■□□□□ 0.12
CDK5RAP3-231ENST00000584063 ROCK1Q13464 1354 aa15.81■□□□□ 0.12
CDK5RAP3-231ENST00000584063 DNMT1P26358 1616 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-231ENST00000584063 NUP155O75694 1391 aa15.8■□□□□ 0.12
CDK5RAP3-231ENST00000584063 RSPH6AQ9H0K4 717 aa15.8■□□□□ 0.12
CDK5RAP3-231ENST00000584063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.8■□□□□ 0.123e-9■■□□□ 12.3
CDK5RAP3-231ENST00000584063 ANKRD50Q9ULJ7 1429 aa15.79■□□□□ 0.12
CDK5RAP3-231ENST00000584063 ITSN2Q9NZM3 1697 aa15.79■□□□□ 0.12
CDK5RAP3-231ENST00000584063 DEKP35659 375 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-231ENST00000584063 KIF15Q9NS87 1388 aa15.79■□□□□ 0.12
CDK5RAP3-231ENST00000584063 NAP1L5Q96NT1 182 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-231ENST00000584063 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.77■□□□□ 0.11
CDK5RAP3-231ENST00000584063 B4GALNT3Q6L9W6 998 aa15.76■□□□□ 0.11
CDK5RAP3-231ENST00000584063 UHRF1BP1LA0JNW5 1464 aa15.76■□□□□ 0.11
CDK5RAP3-231ENST00000584063 CDC42BPBQ9Y5S2 1711 aa15.76■□□□□ 0.11
CDK5RAP3-231ENST00000584063 ASXL2Q76L83 1435 aa15.75■□□□□ 0.11
CDK5RAP3-231ENST00000584063 HSP90B1P14625 803 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP3-231ENST00000584063 TEX14Q8IWB6 1497 aa15.74■□□□□ 0.11
CDK5RAP3-231ENST00000584063 CCDC7Q96M83 1385 aa15.74■□□□□ 0.11
CDK5RAP3-231ENST00000584063 SYCP2Q9BX26 1530 aa15.74■□□□□ 0.11
CDK5RAP3-231ENST00000584063 MRS2Q9HD23 443 aa15.74■□□□□ 0.11
CDK5RAP3-231ENST00000584063 PZPP20742 1482 aa15.74■□□□□ 0.11
CDK5RAP3-231ENST00000584063 RPRD2Q5VT52 1461 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-231ENST00000584063 KIF7Q2M1P5 1343 aa15.73■□□□□ 0.11
CDK5RAP3-231ENST00000584063 MBD5Q9P267 1494 aa15.73■□□□□ 0.11
CDK5RAP3-231ENST00000584063 SAMD9LQ8IVG5 1584 aa15.72■□□□□ 0.11
CDK5RAP3-231ENST00000584063 CNTLNQ9NXG0 1405 aa15.72■□□□□ 0.11
CDK5RAP3-231ENST00000584063 KDM2AQ9Y2K7 1162 aa15.71■□□□□ 0.11
CDK5RAP3-231ENST00000584063 WDR7Q9Y4E6 1490 aa15.71■□□□□ 0.11
CDK5RAP3-231ENST00000584063 PLCH2O75038 1416 aa15.71■□□□□ 0.11
CDK5RAP3-231ENST00000584063 CCDC141Q6ZP82 1450 aa15.71■□□□□ 0.11
CDK5RAP3-231ENST00000584063 PRKRIP1Q9H875 184 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-231ENST00000584063 SPAG9O60271 1321 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-231ENST00000584063 PREX2Q70Z35 1606 aa15.69■□□□□ 0.1
CDK5RAP3-231ENST00000584063 RIMBP3CA6NJZ7 1639 aa15.69■□□□□ 0.1
CDK5RAP3-231ENST00000584063 RIMBP3BA6NNM3 1639 aa15.69■□□□□ 0.1
CDK5RAP3-231ENST00000584063 RIMBP3Q9UFD9 1639 aa15.69■□□□□ 0.1
CDK5RAP3-231ENST00000584063 RGL3Q3MIN7 710 aa15.68■□□□□ 0.1
CDK5RAP3-231ENST00000584063 TRAPPC8Q9Y2L5 1435 aa15.68■□□□□ 0.1
CDK5RAP3-231ENST00000584063 ZMYND15Q9H091 742 aa15.68■□□□□ 0.1
CDK5RAP3-231ENST00000584063 MYO5CQ9NQX4 1742 aa15.68■□□□□ 0.1
CDK5RAP3-231ENST00000584063 ARHGEF12Q9NZN5 1544 aa15.67■□□□□ 0.1
CDK5RAP3-231ENST00000584063 ERICH6BQ5W0A0 696 aa15.65■□□□□ 0.1
CDK5RAP3-231ENST00000584063 SPATA31E1Q6ZUB1 1445 aa15.65■□□□□ 0.1
CDK5RAP3-231ENST00000584063 ADGRL2O95490 1459 aa15.64■□□□□ 0.09
CDK5RAP3-231ENST00000584063 FANCAO15360 1455 aa15.63■□□□□ 0.09
CDK5RAP3-231ENST00000584063 SCAPERQ9BY12 1400 aa15.63■□□□□ 0.09
CDK5RAP3-231ENST00000584063 PLEKHH2Q8IVE3 1493 aa15.62■□□□□ 0.09
CDK5RAP3-231ENST00000584063 KIF3BO15066 747 aa15.62■□□□□ 0.09
CDK5RAP3-231ENST00000584063 KIAA1107Q9UPP5 1409 aa15.62■□□□□ 0.09
CDK5RAP3-231ENST00000584063 RAPGEF3O95398 923 aa15.61■□□□□ 0.09
CDK5RAP3-231ENST00000584063 CROCC2H7BZ55 1655 aa15.61■□□□□ 0.09
CDK5RAP3-231ENST00000584063 DCAF11Q8TEB1 546 aa15.61■□□□□ 0.09
CDK5RAP3-231ENST00000584063 USP47Q96K76 1375 aa15.61■□□□□ 0.09
CDK5RAP3-231ENST00000584063 SHANK2Q9UPX8 1470 aa15.6■□□□□ 0.09
CDK5RAP3-231ENST00000584063 BCCIPQ9P287 314 aaKnown RBP eCLIP15.6■□□□□ 0.09
CDK5RAP3-231ENST00000584063 ADGBQ8N7X0 1667 aa15.59■□□□□ 0.09
CDK5RAP3-231ENST00000584063 CD109Q6YHK3 1445 aa15.59■□□□□ 0.09
CDK5RAP3-231ENST00000584063 BRPF3Q9ULD4 1205 aa15.58■□□□□ 0.09
CDK5RAP3-231ENST00000584063 BCORL1Q5H9F3 1711 aa15.58■□□□□ 0.09
CDK5RAP3-231ENST00000584063 FAM69CQ0P6D2 419 aa15.58■□□□□ 0.08
CDK5RAP3-231ENST00000584063 ADGRL1O94910 1474 aa15.58■□□□□ 0.08
CDK5RAP3-231ENST00000584063 PPP4R2Q9NY27 417 aa15.58■□□□□ 0.08
CDK5RAP3-231ENST00000584063 ARHGEF5Q12774 1597 aa15.57■□□□□ 0.08
CDK5RAP3-231ENST00000584063 GGT6Q6P531 493 aa15.56■□□□□ 0.08
CDK5RAP3-231ENST00000584063 NBR1Q14596 966 aa15.55■□□□□ 0.08
CDK5RAP3-231ENST00000584063 CARD11Q9BXL7 1154 aa15.55■□□□□ 0.08
CDK5RAP3-231ENST00000584063 DHX29Q7Z478 1369 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-231ENST00000584063 ABCC1P33527 1531 aa15.53■□□□□ 0.08
CDK5RAP3-231ENST00000584063 ST20-MTHFSA0A0A6YYL1 179 aa15.53■□□□□ 0.08
CDK5RAP3-231ENST00000584063 ABCA9Q8IUA7 1624 aa15.53■□□□□ 0.08
CDK5RAP3-231ENST00000584063 CCDC9Q9Y3X0 531 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-231ENST00000584063 TSPOAP1O95153 1857 aa15.5■□□□□ 0.07
CDK5RAP3-231ENST00000584063 FAM135AQ9P2D6 1515 aa15.5■□□□□ 0.07
CDK5RAP3-231ENST00000584063 CCDC144AA2RUR9 1427 aa15.49■□□□□ 0.07
CDK5RAP3-231ENST00000584063 NBPF1Q3BBV0 1214 aa15.49■□□□□ 0.07
CDK5RAP3-231ENST00000584063 SENP3Q9H4L4 574 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-231ENST00000584063 PAK3O75914 559 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-231ENST00000584063 CHGAP10645 457 aaKnown RBP15.47■□□□□ 0.07
CDK5RAP3-231ENST00000584063 FANCIQ9NVI1 1328 aa15.47■□□□□ 0.07
CDK5RAP3-231ENST00000584063 GLIPR1L2Q4G1C9 344 aa15.47■□□□□ 0.07
CDK5RAP3-231ENST00000584063 ZBED9Q6R2W3 1325 aa15.47■□□□□ 0.07
CDK5RAP3-231ENST00000584063 KDM5CP41229 1560 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms