RNA–Protein interactions for RNA: ENST00000583994.5

RHOT1-215, Transcript of ras homolog family member T1, humanhuman

TSL 2

Gene RHOT1, Length 3,289 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-215ENST00000583994 TCOF1Q13428 1488 aaKnown RBP21.6■■□□□ 1.05
RHOT1-215ENST00000583994 GCC2Q8IWJ2 1684 aa21.59■■□□□ 1.05
RHOT1-215ENST00000583994 DNMBPQ6XZF7 1577 aa21.59■■□□□ 1.05
RHOT1-215ENST00000583994 C8orf34Q49A92 452 aa21.58■■□□□ 1.04
RHOT1-215ENST00000583994 PDS5BQ9NTI5 1447 aa21.58■■□□□ 1.04
RHOT1-215ENST00000583994 HNRNPMP52272 730 aaKnown RBP eCLIP21.57■■□□□ 1.04
RHOT1-215ENST00000583994 NAP1L5Q96NT1 182 aaPredicted RBP21.57■■□□□ 1.04
RHOT1-215ENST00000583994 CUL7Q14999 1698 aa21.57■■□□□ 1.04
RHOT1-215ENST00000583994 KNSTRNQ9Y448 316 aa21.56■■□□□ 1.04
RHOT1-215ENST00000583994 GOLGA2Q08379 1002 aa21.56■■□□□ 1.04
RHOT1-215ENST00000583994 BCAR3O75815 825 aa21.55■■□□□ 1.04
RHOT1-215ENST00000583994 UBE2Q2Q8WVN8 375 aa21.55■■□□□ 1.04
RHOT1-215ENST00000583994 ROCK1Q13464 1354 aa21.54■■□□□ 1.04
RHOT1-215ENST00000583994 ANKRD30AQ9BXX3 1397 aa21.54■■□□□ 1.04
RHOT1-215ENST00000583994 CC2D2AQ9P2K1 1620 aa21.54■■□□□ 1.04
RHOT1-215ENST00000583994 PRG4Q92954 1404 aaPredicted RBP21.53■■□□□ 1.04
RHOT1-215ENST00000583994 PRDM2Q13029 1718 aa21.53■■□□□ 1.04
RHOT1-215ENST00000583994 PZPP20742 1482 aa21.53■■□□□ 1.04
RHOT1-215ENST00000583994 ANKRD50Q9ULJ7 1429 aa21.51■■□□□ 1.03
RHOT1-215ENST00000583994 BECN1Q14457 450 aa21.51■■□□□ 1.03
RHOT1-215ENST00000583994 TMF1P82094 1093 aa21.5■■□□□ 1.03
RHOT1-215ENST00000583994 RSPH6AQ9H0K4 717 aa21.5■■□□□ 1.03
RHOT1-215ENST00000583994 COG6Q9Y2V7 657 aa21.5■■□□□ 1.03
RHOT1-215ENST00000583994 APAF1O14727 1248 aa21.49■■□□□ 1.03
RHOT1-215ENST00000583994 SEC24BO95487 1268 aa21.49■■□□□ 1.03
RHOT1-215ENST00000583994 SAMD9Q5K651 1589 aa21.48■■□□□ 1.03
RHOT1-215ENST00000583994 PER1O15534 1290 aaPredicted RBP21.47■■□□□ 1.03
RHOT1-215ENST00000583994 TNNT2P45379 298 aaPredicted RBP21.47■■□□□ 1.03
RHOT1-215ENST00000583994 UPF2Q9HAU5 1272 aaKnown RBP21.47■■□□□ 1.03
RHOT1-215ENST00000583994 DNAJC5BQ9UF47 199 aa21.47■■□□□ 1.03
RHOT1-215ENST00000583994 DUSP27Q5VZP5 1158 aa21.46■■□□□ 1.03
RHOT1-215ENST00000583994 PANK1Q8TE04 598 aa21.46■■□□□ 1.03
RHOT1-215ENST00000583994 ARHGEF11O15085 1522 aa21.46■■□□□ 1.03
RHOT1-215ENST00000583994 FAM43AQ8N2R8 423 aa21.46■■□□□ 1.03
RHOT1-215ENST00000583994 PLEKHD1A6NEE1 506 aa21.46■■□□□ 1.03
RHOT1-215ENST00000583994 KDM2BQ8NHM5 1336 aa21.45■■□□□ 1.03
RHOT1-215ENST00000583994 BCL2L13Q9BXK5 485 aa21.45■■□□□ 1.02
RHOT1-215ENST00000583994 IGHDP01880 384 aa21.45■■□□□ 1.02
RHOT1-215ENST00000583994 CLUAP1Q96AJ1 413 aa21.45■■□□□ 1.02
RHOT1-215ENST00000583994 URB2Q14146 1524 aaKnown RBP21.44■■□□□ 1.02
RHOT1-215ENST00000583994 ABCA5Q8WWZ7 1642 aa21.44■■□□□ 1.02
RHOT1-215ENST00000583994 PARD3Q8TEW0 1356 aa21.44■■□□□ 1.02
RHOT1-215ENST00000583994 DISP3Q9P2K9 1392 aa21.42■■□□□ 1.02
RHOT1-215ENST00000583994 KDM5CP41229 1560 aa21.42■■□□□ 1.02
RHOT1-215ENST00000583994 RRAGDQ9NQL2 400 aaPredicted RBP21.41■■□□□ 1.02
RHOT1-215ENST00000583994 PLEKHH1Q9ULM0 1364 aa21.41■■□□□ 1.02
RHOT1-215ENST00000583994 SPINK5Q9NQ38 1064 aaPredicted RBP21.41■■□□□ 1.02
RHOT1-215ENST00000583994 PPP2R1AP30153 589 aa21.4■■□□□ 1.02
RHOT1-215ENST00000583994 RRP7AQ9Y3A4 280 aaKnown RBP21.4■■□□□ 1.02
RHOT1-215ENST00000583994 CAMSAP2Q08AD1 1489 aa21.38■■□□□ 1.01
RHOT1-215ENST00000583994 RALGAPBQ86X10 1494 aa21.38■■□□□ 1.01
RHOT1-215ENST00000583994 VSIG10Q8N0Z9 540 aa21.37■■□□□ 1.01
RHOT1-215ENST00000583994 PNNQ9H307 717 aaKnown RBP21.37■■□□□ 1.01
RHOT1-215ENST00000583994 L1TD1Q5T7N2 865 aaKnown RBP21.36■■□□□ 1.01
RHOT1-215ENST00000583994 LAMC3Q9Y6N6 1575 aa21.35■■□□□ 1.01
RHOT1-215ENST00000583994 GOLGA6L3A6NEY3 463 aa21.35■■□□□ 1.01
RHOT1-215ENST00000583994 CHMP7Q8WUX9 453 aaPredicted RBP21.35■■□□□ 1.01
RHOT1-215ENST00000583994 PANK2Q9BZ23 570 aa21.35■■□□□ 1.01
RHOT1-215ENST00000583994 CCDC144AA2RUR9 1427 aa21.35■■□□□ 1.01
RHOT1-215ENST00000583994 MBD5Q9P267 1494 aa21.34■■□□□ 1.01
RHOT1-215ENST00000583994 POLR1AO95602 1720 aaPredicted RBP21.34■■□□□ 1.01
RHOT1-215ENST00000583994 DNMT1P26358 1616 aaKnown RBP21.33■■□□□ 1.01
RHOT1-215ENST00000583994 KIF14Q15058 1648 aa21.33■■□□□ 1.01
RHOT1-215ENST00000583994 SLFN5Q08AF3 891 aa21.33■■□□□ 1
RHOT1-215ENST00000583994 IQGAP2Q13576 1575 aa21.32■■□□□ 1
RHOT1-215ENST00000583994 KIAA0586Q9BVV6 1533 aa21.32■■□□□ 1
RHOT1-215ENST00000583994 MFAP1P55081 439 aaKnown RBP21.32■■□□□ 1
RHOT1-215ENST00000583994 GLIPR1L2Q4G1C9 344 aa21.31■■□□□ 1
RHOT1-215ENST00000583994 DMRT2Q9Y5R5 561 aa21.31■■□□□ 1
RHOT1-215ENST00000583994 TESK2Q96S53 571 aa21.3■■□□□ 1
RHOT1-215ENST00000583994 CENPJQ9HC77 1338 aaPredicted RBP21.29■■□□□ 1
RHOT1-215ENST00000583994 WDR62O43379 1518 aa21.28■■□□□ 1
RHOT1-215ENST00000583994 TNNQ9UQP3 1299 aa21.28■■□□□ 1
RHOT1-215ENST00000583994 SENP3Q9H4L4 574 aaPredicted RBP21.28■■□□□ 1
RHOT1-215ENST00000583994 C9orf84Q5VXU9 1444 aa21.27■□□□□ 0.99
RHOT1-215ENST00000583994 NUP153P49790 1475 aaKnown RBP21.27■□□□□ 0.99
RHOT1-215ENST00000583994 FOXD4L1Q9NU39 408 aa21.26■□□□□ 0.99
RHOT1-215ENST00000583994 TROQ12816 1431 aaPredicted RBP21.26■□□□□ 0.99
RHOT1-215ENST00000583994 UHRF1BP1Q6BDS2 1440 aa21.26■□□□□ 0.99
RHOT1-215ENST00000583994 ERBINQ96RT1 1412 aa21.26■□□□□ 0.99
RHOT1-215ENST00000583994 XRCC6P12956 609 aaKnown RBP eCLIP21.25■□□□□ 0.99
RHOT1-215ENST00000583994 TBC1D2Q9BYX2 928 aa21.25■□□□□ 0.99
RHOT1-215ENST00000583994 PLB1Q6P1J6 1458 aa21.25■□□□□ 0.99
RHOT1-215ENST00000583994 HSP90AA1P07900 732 aaKnown RBP21.25■□□□□ 0.99
RHOT1-215ENST00000583994 GPATCH8Q9UKJ3 1502 aaKnown RBP21.24■□□□□ 0.99
RHOT1-215ENST00000583994 HSP90AA2PQ14568 343 aaPredicted RBP21.24■□□□□ 0.99
RHOT1-215ENST00000583994 PDZRN3Q9UPQ7 1066 aa21.23■□□□□ 0.99
RHOT1-215ENST00000583994 USP19O94966 1318 aa21.22■□□□□ 0.99
RHOT1-215ENST00000583994 MAPK8IP3Q9UPT6 1336 aa21.22■□□□□ 0.99
RHOT1-215ENST00000583994 E9PSI1 815 aa21.22■□□□□ 0.99
RHOT1-215ENST00000583994 TRIM44Q96DX7 344 aaPredicted RBP21.22■□□□□ 0.99
RHOT1-215ENST00000583994 PKNOX2Q96KN3 472 aa21.21■□□□□ 0.99
RHOT1-215ENST00000583994 BLMP54132 1417 aaPredicted RBP21.21■□□□□ 0.99
RHOT1-215ENST00000583994 CGNL1Q0VF96 1302 aa21.21■□□□□ 0.99
RHOT1-215ENST00000583994 TRAK2O60296 914 aa21.19■□□□□ 0.98
RHOT1-215ENST00000583994 ZMYM4Q5VZL5 1548 aa21.18■□□□□ 0.98
RHOT1-215ENST00000583994 MYH16Q9H6N6 1097 aa21.18■□□□□ 0.98
RHOT1-215ENST00000583994 FTSJ3Q8IY81 847 aaKnown RBP21.18■□□□□ 0.98
RHOT1-215ENST00000583994 PRAG1Q86YV5 1406 aa21.18■□□□□ 0.98
RHOT1-215ENST00000583994 MCM4P33991 863 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms