RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 TIE1P35590 1138 aa8.87□□□□□ -0.99
VAPA-207ENST00000583879 CEBPAP49715 358 aaPredicted RBP8.87□□□□□ -0.99
VAPA-207ENST00000583879 RASEFQ8IZ41 740 aa8.87□□□□□ -0.99
VAPA-207ENST00000583879 CDK11AQ9UQ88 783 aaPredicted RBP8.87□□□□□ -0.99
VAPA-207ENST00000583879 ZFYVE16Q7Z3T8 1539 aa8.86□□□□□ -0.99
VAPA-207ENST00000583879 ATP10AO60312 1499 aa8.86□□□□□ -0.99
VAPA-207ENST00000583879 AFAP1Q8N556 730 aa8.86□□□□□ -0.99
VAPA-207ENST00000583879 EFCAB5A4FU69 1503 aa8.85□□□□□ -0.99
VAPA-207ENST00000583879 ZMYM4Q5VZL5 1548 aa8.85□□□□□ -0.99
VAPA-207ENST00000583879 RIMS1Q86UR5 1692 aaKnown RBP8.85□□□□□ -0.99
VAPA-207ENST00000583879 TRPC6Q9Y210 931 aa8.85□□□□□ -0.99
VAPA-207ENST00000583879 RICTORQ6R327 1708 aa8.85□□□□□ -0.99
VAPA-207ENST00000583879 HECW1Q76N89 1606 aa8.84□□□□□ -0.99
VAPA-207ENST00000583879 UBTFP17480 764 aaKnown RBP8.84□□□□□ -0.99
VAPA-207ENST00000583879 PLCD3Q8N3E9 789 aa8.84□□□□□ -0.99
VAPA-207ENST00000583879 FAM163AQ96GL9 167 aaPredicted RBP8.84□□□□□ -0.99
VAPA-207ENST00000583879 TTC37Q6PGP7 1564 aa8.83□□□□□ -1
VAPA-207ENST00000583879 CFAP74Q9C0B2 1584 aa8.83□□□□□ -1
VAPA-207ENST00000583879 MYT1LQ9UL68 1186 aa8.83□□□□□ -1
VAPA-207ENST00000583879 C9orf84Q5VXU9 1444 aa8.82□□□□□ -1
VAPA-207ENST00000583879 CDK13Q14004 1512 aaKnown RBP8.82□□□□□ -1
VAPA-207ENST00000583879 POTEFA5A3E0 1075 aa8.82□□□□□ -1
VAPA-207ENST00000583879 SEC24BO95487 1268 aa8.82□□□□□ -1
VAPA-207ENST00000583879 FMN1Q68DA7 1419 aa8.81□□□□□ -1
VAPA-207ENST00000583879 ARHGEF12Q9NZN5 1544 aa8.81□□□□□ -1
VAPA-207ENST00000583879 SIGLEC1Q9BZZ2 1709 aa8.81□□□□□ -1
VAPA-207ENST00000583879 TTLL13PA6NNM8 815 aa8.81□□□□□ -1
VAPA-207ENST00000583879 ZBTB47Q9UFB7 747 aaPredicted RBP8.8□□□□□ -1
VAPA-207ENST00000583879 ZNF518AQ6AHZ1 1483 aa8.79□□□□□ -1
VAPA-207ENST00000583879 SGIP1Q9BQI5 828 aa8.79□□□□□ -1
VAPA-207ENST00000583879 ESF1Q9H501 851 aaKnown RBP8.79□□□□□ -1
VAPA-207ENST00000583879 TROQ12816 1431 aaPredicted RBP8.79□□□□□ -1
VAPA-207ENST00000583879 UHRF1BP1Q6BDS2 1440 aa8.79□□□□□ -1
VAPA-207ENST00000583879 DISP3Q9P2K9 1392 aa8.78□□□□□ -1
VAPA-207ENST00000583879 LCE2DQ5TA82 110 aaPredicted RBP8.78□□□□□ -1
VAPA-207ENST00000583879 ILDR2Q71H61 639 aa8.78□□□□□ -1
VAPA-207ENST00000583879 PCDHB13Q9Y5F0 798 aa8.78□□□□□ -1
VAPA-207ENST00000583879 ARHGAP35Q9NRY4 1499 aa8.77□□□□□ -1
VAPA-207ENST00000583879 SOCS7O14512 581 aa8.77□□□□□ -1.01
VAPA-207ENST00000583879 CLIP1P30622 1438 aa8.77□□□□□ -1.01
VAPA-207ENST00000583879 MLH3Q9UHC1 1453 aa8.77□□□□□ -1.01
VAPA-207ENST00000583879 IER5LQ5T953 404 aa8.76□□□□□ -1.01
VAPA-207ENST00000583879 TRIM35Q9UPQ4 493 aa8.76□□□□□ -1.01
VAPA-207ENST00000583879 COLQQ9Y215 455 aaPredicted RBP8.76□□□□□ -1.01
VAPA-207ENST00000583879 PTPRTO14522 1441 aa8.76□□□□□ -1.01
VAPA-207ENST00000583879 TRAPPC8Q9Y2L5 1435 aa8.76□□□□□ -1.01
VAPA-207ENST00000583879 FER1L4A9Z1Z3 1794 aa8.76□□□□□ -1.01
VAPA-207ENST00000583879 ARHGAP5Q13017 1502 aa8.75□□□□□ -1.01
VAPA-207ENST00000583879 KDM5CP41229 1560 aa8.74□□□□□ -1.01
VAPA-207ENST00000583879 PREX1Q8TCU6 1659 aa8.73□□□□□ -1.01
VAPA-207ENST00000583879 NUBP1P53384 320 aa8.73□□□□□ -1.01
VAPA-207ENST00000583879 AGLP35573 1532 aa8.73□□□□□ -1.01
VAPA-207ENST00000583879 KIF14Q15058 1648 aa8.72□□□□□ -1.01
VAPA-207ENST00000583879 MYO5CQ9NQX4 1742 aa8.72□□□□□ -1.01
VAPA-207ENST00000583879 STRCQ7RTU9 1775 aa8.72□□□□□ -1.01
VAPA-207ENST00000583879 FAM212AQ96EL1 285 aa8.72□□□□□ -1.01
VAPA-207ENST00000583879 ZNF777Q9ULD5 760 aaPredicted RBP8.72□□□□□ -1.01
VAPA-207ENST00000583879 REREQ9P2R6 1566 aa8.72□□□□□ -1.01
VAPA-207ENST00000583879 DIP2CQ9Y2E4 1556 aa8.72□□□□□ -1.01
VAPA-207ENST00000583879 ZMYM3Q14202 1370 aa8.72□□□□□ -1.01
VAPA-207ENST00000583879 CNTLNQ9NXG0 1405 aa8.71□□□□□ -1.01
VAPA-207ENST00000583879 HNRNPMP52272 730 aaKnown RBP eCLIP8.71□□□□□ -1.02
VAPA-207ENST00000583879 SETD1BQ9UPS6 1966 aaKnown RBP8.7□□□□□ -1.02
VAPA-207ENST00000583879 IFNL1Q8IU54 200 aa8.7□□□□□ -1.02
VAPA-207ENST00000583879 SPAG9O60271 1321 aaKnown RBP8.7□□□□□ -1.02
VAPA-207ENST00000583879 NCKAP5LQ9HCH0 1330 aa8.7□□□□□ -1.02
VAPA-207ENST00000583879 NCOA1Q15788 1441 aa8.7□□□□□ -1.02
VAPA-207ENST00000583879 CASKIN1Q8WXD9 1431 aa8.7□□□□□ -1.02
VAPA-207ENST00000583879 TMEM106CQ9BVX2 250 aa8.69□□□□□ -1.02
VAPA-207ENST00000583879 NPATQ14207 1427 aa8.69□□□□□ -1.02
VAPA-207ENST00000583879 LTBP4Q8N2S1 1624 aa8.69□□□□□ -1.02
VAPA-207ENST00000583879 PKD2Q13563 968 aa8.68□□□□□ -1.02
VAPA-207ENST00000583879 GGT6Q6P531 493 aa8.68□□□□□ -1.02
VAPA-207ENST00000583879 CFDP1Q9UEE9 299 aaPredicted RBP8.68□□□□□ -1.02
VAPA-207ENST00000583879 IQSEC2Q5JU85 1478 aa8.68□□□□□ -1.02
VAPA-207ENST00000583879 CCDC18Q5T9S5 1454 aa8.68□□□□□ -1.02
VAPA-207ENST00000583879 ABCC1P33527 1531 aa8.68□□□□□ -1.02
VAPA-207ENST00000583879 ABCA6Q8N139 1617 aa8.68□□□□□ -1.02
VAPA-207ENST00000583879 UBAP1LF5GYI3 381 aa8.67□□□□□ -1.02
VAPA-207ENST00000583879 C3P01024 1663 aa8.67□□□□□ -1.02
VAPA-207ENST00000583879 PLCG2P16885 1265 aa8.67□□□□□ -1.02
VAPA-207ENST00000583879 SLAIN1Q8ND83 568 aa8.67□□□□□ -1.02
VAPA-207ENST00000583879 ZNF335Q9H4Z2 1342 aaPredicted RBP8.67□□□□□ -1.02
VAPA-207ENST00000583879 CDC42BPBQ9Y5S2 1711 aa8.66□□□□□ -1.02
VAPA-207ENST00000583879 KIAA1107Q9UPP5 1409 aa8.66□□□□□ -1.02
VAPA-207ENST00000583879 GPATCH8Q9UKJ3 1502 aaKnown RBP8.65□□□□□ -1.02
VAPA-207ENST00000583879 KIDINS220Q9ULH0 1771 aa8.65□□□□□ -1.02
VAPA-207ENST00000583879 CAMSAP1Q5T5Y3 1602 aa8.65□□□□□ -1.03
VAPA-207ENST00000583879 CDAN1Q8IWY9 1227 aa8.64□□□□□ -1.03
VAPA-207ENST00000583879 PREX2Q70Z35 1606 aa8.64□□□□□ -1.03
VAPA-207ENST00000583879 SAMD9LQ8IVG5 1584 aa8.64□□□□□ -1.03
VAPA-207ENST00000583879 A2MP01023 1474 aa8.64□□□□□ -1.03
VAPA-207ENST00000583879 PTPRKQ15262 1439 aa8.63□□□□□ -1.03
VAPA-207ENST00000583879 CCNB3Q8WWL7 1395 aa8.63□□□□□ -1.03
VAPA-207ENST00000583879 FKBP8Q14318 412 aa8.63□□□□□ -1.03
VAPA-207ENST00000583879 LRRIQ1Q96JM4 1722 aa8.63□□□□□ -1.03
VAPA-207ENST00000583879 ZNF644Q9H582 1327 aaPredicted RBP8.62□□□□□ -1.03
VAPA-207ENST00000583879 DCAF8Q5TAQ9 597 aa8.62□□□□□ -1.03
VAPA-207ENST00000583879 PLA2R1Q13018 1463 aa8.62□□□□□ -1.03
VAPA-207ENST00000583879 PLEKHH2Q8IVE3 1493 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms