RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 CCNB3Q8WWL7 1395 aa14.06□□□□□ -0.16
MSI2-217ENST00000583705 TSR1Q2NL82 804 aaKnown RBP14.05□□□□□ -0.16
MSI2-217ENST00000583705 AMOTL1Q8IY63 956 aa14.05□□□□□ -0.16
MSI2-217ENST00000583705 GBP4Q96PP9 640 aa14.05□□□□□ -0.16
MSI2-217ENST00000583705 APPP05067 770 aa14.05□□□□□ -0.16
MSI2-217ENST00000583705 PAF1Q8N7H5 531 aa14.05□□□□□ -0.16
MSI2-217ENST00000583705 FYB1O15117 783 aa14.05□□□□□ -0.16
MSI2-217ENST00000583705 MCTP1Q6DN14 999 aa14.04□□□□□ -0.16
MSI2-217ENST00000583705 CALD1Q05682 793 aaKnown RBP14.03□□□□□ -0.16
MSI2-217ENST00000583705 SYAP1Q96A49 352 aaPredicted RBP14.03□□□□□ -0.16
MSI2-217ENST00000583705 KIF16BQ96L93 1317 aa14.03□□□□□ -0.16
MSI2-217ENST00000583705 C1orf141Q5JVX7 400 aa14.03□□□□□ -0.16
MSI2-217ENST00000583705 CFAP44Q96MT7 982 aa14.03□□□□□ -0.16
MSI2-217ENST00000583705 VSIG10Q8N0Z9 540 aa14.02□□□□□ -0.16
MSI2-217ENST00000583705 FOSBP53539 338 aa14.02□□□□□ -0.17
MSI2-217ENST00000583705 TPM2P07951 284 aa14.02□□□□□ -0.17
MSI2-217ENST00000583705 FAM184AQ8NB25 1140 aa14.02□□□□□ -0.17
MSI2-217ENST00000583705 EIF2S2P20042 333 aaKnown RBP14.01□□□□□ -0.17
MSI2-217ENST00000583705 CCAR1Q8IX12 1150 aaKnown RBP14.01□□□□□ -0.17
MSI2-217ENST00000583705 KDM4AO75164 1064 aa14.01□□□□□ -0.17
MSI2-217ENST00000583705 ELL2O00472 640 aaPredicted RBP14.01□□□□□ -0.17
MSI2-217ENST00000583705 TMEM132AQ24JP5 1023 aa14□□□□□ -0.17
MSI2-217ENST00000583705 IBSPP21815 317 aaPredicted RBP13.99□□□□□ -0.17
MSI2-217ENST00000583705 ZFYVE27Q5T4F4 411 aa13.99□□□□□ -0.17
MSI2-217ENST00000583705 SYNE3Q6ZMZ3 975 aa13.99□□□□□ -0.17
MSI2-217ENST00000583705 BCL11BQ9C0K0 894 aaPredicted RBP13.99□□□□□ -0.17
MSI2-217ENST00000583705 RWDD1Q9H446 243 aaPredicted RBP13.98□□□□□ -0.17
MSI2-217ENST00000583705 ROCK2O75116 1388 aaKnown RBP13.98□□□□□ -0.17
MSI2-217ENST00000583705 HMMRO75330 724 aa13.98□□□□□ -0.17
MSI2-217ENST00000583705 RBM33Q96EV2 1170 aaKnown RBP13.97□□□□□ -0.17
MSI2-217ENST00000583705 RRP7AQ9Y3A4 280 aaKnown RBP13.97□□□□□ -0.17
MSI2-217ENST00000583705 ODF2Q5BJF6 829 aa13.97□□□□□ -0.17
MSI2-217ENST00000583705 IKQ13123 557 aaPredicted RBP13.97□□□□□ -0.17
MSI2-217ENST00000583705 CSPP1Q1MSJ5 1256 aa13.97□□□□□ -0.17
MSI2-217ENST00000583705 TTC5Q8N0Z6 440 aa13.96□□□□□ -0.17
MSI2-217ENST00000583705 R3HCC1Q9Y3T6 440 aaKnown RBP13.96□□□□□ -0.17
MSI2-217ENST00000583705 CT47A1Q5JQC4 288 aaPredicted RBP13.96□□□□□ -0.18
MSI2-217ENST00000583705 KTN1Q86UP2 1357 aaKnown RBP13.95□□□□□ -0.18
MSI2-217ENST00000583705 FAM177BA6PVY3 158 aa13.95□□□□□ -0.18
MSI2-217ENST00000583705 CCDC27Q2M243 656 aa13.95□□□□□ -0.18
MSI2-217ENST00000583705 NAP1L1P55209 391 aaKnown RBP13.95□□□□□ -0.18
MSI2-217ENST00000583705 ZNF592Q92610 1267 aa13.94□□□□□ -0.18
MSI2-217ENST00000583705 KIF3BO15066 747 aa13.94□□□□□ -0.18
MSI2-217ENST00000583705 PLIN1O60240 522 aa13.94□□□□□ -0.18
MSI2-217ENST00000583705 PKD2Q13563 968 aa13.94□□□□□ -0.18
MSI2-217ENST00000583705 DEKP35659 375 aaKnown RBP13.93□□□□□ -0.18
MSI2-217ENST00000583705 NFXL1Q6ZNB6 911 aa13.93□□□□□ -0.18
MSI2-217ENST00000583705 SETQ01105 290 aaPredicted RBP13.93□□□□□ -0.18
MSI2-217ENST00000583705 TRIM29Q14134 588 aa13.93□□□□□ -0.18
MSI2-217ENST00000583705 GOLGA6L19H0YKK7 550 aa13.92□□□□□ -0.18
MSI2-217ENST00000583705 TPM1P09493 284 aa13.92□□□□□ -0.18
MSI2-217ENST00000583705 TRAK1Q9UPV9 953 aa13.92□□□□□ -0.18
MSI2-217ENST00000583705 WASHC2CQ9Y4E1 1318 aa13.92□□□□□ -0.18
MSI2-217ENST00000583705 TERF2IPQ9NYB0 399 aa13.92□□□□□ -0.18
MSI2-217ENST00000583705 HDAC5Q9UQL6 1122 aa13.92□□□□□ -0.18
MSI2-217ENST00000583705 PPM1FP49593 454 aaPredicted RBP13.91□□□□□ -0.18
MSI2-217ENST00000583705 USP35Q9P2H5 1018 aa13.91□□□□□ -0.18
MSI2-217ENST00000583705 C9orf78Q9NZ63 289 aaPredicted RBP13.91□□□□□ -0.18
MSI2-217ENST00000583705 RRP12Q5JTH9 1297 aaKnown RBP13.91□□□□□ -0.18
MSI2-217ENST00000583705 PTMSP20962 102 aa13.9□□□□□ -0.18
MSI2-217ENST00000583705 TEFQ10587 303 aa13.9□□□□□ -0.18
MSI2-217ENST00000583705 BCL2L13Q9BXK5 485 aa13.9□□□□□ -0.18
MSI2-217ENST00000583705 SKIDA1Q1XH10 827 aa13.9□□□□□ -0.18
MSI2-217ENST00000583705 PSME1Q06323 249 aa13.9□□□□□ -0.18
MSI2-217ENST00000583705 RCAN3Q9UKA8 241 aa13.9□□□□□ -0.18
MSI2-217ENST00000583705 KIF3AQ9Y496 699 aa13.9□□□□□ -0.19
MSI2-217ENST00000583705 CHMP4AQ9BY43 222 aa13.89□□□□□ -0.19
MSI2-217ENST00000583705 BECN2A8MW95 431 aa13.89□□□□□ -0.19
MSI2-217ENST00000583705 PMFBP1Q8TBY8 1022 aa13.89□□□□□ -0.19
MSI2-217ENST00000583705 CCDC70Q6NSX1 233 aa13.89□□□□□ -0.19
MSI2-217ENST00000583705 HSPA5P11021 654 aaKnown RBP13.88□□□□□ -0.19
MSI2-217ENST00000583705 ST18O60284 1047 aa13.88□□□□□ -0.19
MSI2-217ENST00000583705 ANKRD45Q5TZF3 282 aa13.88□□□□□ -0.19
MSI2-217ENST00000583705 WWC2Q6AWC2 1192 aa13.88□□□□□ -0.19
MSI2-217ENST00000583705 HSP90AB2PQ58FF8 381 aa13.87□□□□□ -0.19
MSI2-217ENST00000583705 WDR70Q9NW82 654 aa13.87□□□□□ -0.19
MSI2-217ENST00000583705 SF3B2Q13435 895 aaKnown RBP13.87□□□□□ -0.19
MSI2-217ENST00000583705 TCERG1O14776 1098 aaKnown RBP13.87□□□□□ -0.19
MSI2-217ENST00000583705 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
MSI2-217ENST00000583705 CCDC180Q9P1Z9 1646 aa13.87□□□□□ -0.19
MSI2-217ENST00000583705 ZNF428Q96B54 188 aa13.87□□□□□ -0.19
MSI2-217ENST00000583705 ERICH2A1L162 156 aa13.87□□□□□ -0.19
MSI2-217ENST00000583705 EPS15P42566 896 aa13.87□□□□□ -0.19
MSI2-217ENST00000583705 NEXNQ0ZGT2 675 aa13.87□□□□□ -0.19
MSI2-217ENST00000583705 GOLGA6L3A6NEY3 463 aa13.87□□□□□ -0.19
MSI2-217ENST00000583705 CCDC47Q96A33 483 aaKnown RBP13.86□□□□□ -0.19
MSI2-217ENST00000583705 ANO2Q9NQ90 1003 aa13.86□□□□□ -0.19
MSI2-217ENST00000583705 PHF14O94880 888 aa13.86□□□□□ -0.19
MSI2-217ENST00000583705 NUTM2GQ5VZR2 741 aa13.85□□□□□ -0.19
MSI2-217ENST00000583705 GOLGA3Q08378 1498 aa13.85□□□□□ -0.19
MSI2-217ENST00000583705 CPLX1O14810 134 aa13.85□□□□□ -0.19
MSI2-217ENST00000583705 HNRNPMP52272 730 aaKnown RBP eCLIP13.85□□□□□ -0.19
MSI2-217ENST00000583705 DIAPH3Q9NSV4 1193 aa13.85□□□□□ -0.19
MSI2-217ENST00000583705 AIMP1Q12904 312 aaKnown RBP13.85□□□□□ -0.19
MSI2-217ENST00000583705 ATP2B2Q01814 1243 aa13.84□□□□□ -0.19
MSI2-217ENST00000583705 CEP162Q5TB80 1403 aa13.84□□□□□ -0.19
MSI2-217ENST00000583705 IPO7O95373 1038 aaKnown RBP13.84□□□□□ -0.19
MSI2-217ENST00000583705 STK11IPQ8N1F8 1099 aa13.83□□□□□ -0.19
MSI2-217ENST00000583705 NUTM2BA6NNL0 878 aaPredicted RBP13.83□□□□□ -0.2
MSI2-217ENST00000583705 NUTM2EB1AL46 878 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms