RNA–Protein interactions for RNA: ENST00000583550.1

CCDC178-212, Transcript of coiled-coil domain containing 178, humanhuman

TSL 3

Gene CCDC178, Length 335 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-212ENST00000583550 PTPREP23469 700 aa8.95□□□□□ -0.98
CCDC178-212ENST00000583550 AXIN2Q9Y2T1 843 aa8.95□□□□□ -0.98
CCDC178-212ENST00000583550 CECR2Q9BXF3 1484 aa8.95□□□□□ -0.98
CCDC178-212ENST00000583550 DDX12PQ92771 950 aa8.94□□□□□ -0.98
CCDC178-212ENST00000583550 ADAM33Q9BZ11 813 aa8.94□□□□□ -0.98
CCDC178-212ENST00000583550 ANKRD13DQ6ZTN6 518 aa8.93□□□□□ -0.98
CCDC178-212ENST00000583550 SPNS2Q8IVW8 549 aa8.93□□□□□ -0.98
CCDC178-212ENST00000583550 KCNK17Q96T54 332 aa8.93□□□□□ -0.98
CCDC178-212ENST00000583550 PSEN2P49810 448 aa8.92□□□□□ -0.98
CCDC178-212ENST00000583550 PLSCR2Q9NRY7 297 aa8.91□□□□□ -0.98
CCDC178-212ENST00000583550 GRXCR2A6NFK2 248 aa8.9□□□□□ -0.98
CCDC178-212ENST00000583550 TK2O00142 265 aa8.9□□□□□ -0.98
CCDC178-212ENST00000583550 NBR1Q14596 966 aa8.9□□□□□ -0.98
CCDC178-212ENST00000583550 DMRTA1Q5VZB9 504 aa8.9□□□□□ -0.98
CCDC178-212ENST00000583550 SCRIBQ14160 1630 aa8.9□□□□□ -0.99
CCDC178-212ENST00000583550 SLC4A5Q9BY07 1137 aa8.89□□□□□ -0.99
CCDC178-212ENST00000583550 EN1Q05925 392 aaPredicted RBP8.88□□□□□ -0.99
CCDC178-212ENST00000583550 ADGRD1Q6QNK2 874 aa8.88□□□□□ -0.99
CCDC178-212ENST00000583550 PPP1R3GB7ZBB8 358 aa8.87□□□□□ -0.99
CCDC178-212ENST00000583550 C6orf132Q5T0Z8 1188 aa8.87□□□□□ -0.99
CCDC178-212ENST00000583550 RBM33Q96EV2 1170 aaKnown RBP8.87□□□□□ -0.99
CCDC178-212ENST00000583550 UNC13AQ9UPW8 1703 aa8.87□□□□□ -0.99
CCDC178-212ENST00000583550 OSBPP22059 807 aa8.86□□□□□ -0.99
CCDC178-212ENST00000583550 MAP3K7O43318 606 aa8.85□□□□□ -0.99
CCDC178-212ENST00000583550 MMRN1Q13201 1228 aa8.85□□□□□ -0.99
CCDC178-212ENST00000583550 ZBED2Q9BTP6 218 aa8.85□□□□□ -0.99
CCDC178-212ENST00000583550 EIF4G1Q04637 1599 aaKnown RBP8.85□□□□□ -0.99
CCDC178-212ENST00000583550 CC2D2AQ9P2K1 1620 aa8.84□□□□□ -0.99
CCDC178-212ENST00000583550 VPS9D1Q9Y2B5 631 aa8.84□□□□□ -0.99
CCDC178-212ENST00000583550 HRO43593 1189 aa8.83□□□□□ -1
CCDC178-212ENST00000583550 COL9A1P20849 921 aa8.83□□□□□ -1
CCDC178-212ENST00000583550 MLLT3P42568 568 aaPredicted RBP8.83□□□□□ -1
CCDC178-212ENST00000583550 SEMA3EO15041 775 aa8.82□□□□□ -1
CCDC178-212ENST00000583550 PRIM1P49642 420 aaKnown RBP8.82□□□□□ -1
CCDC178-212ENST00000583550 MYT1LQ9UL68 1186 aa8.82□□□□□ -1
CCDC178-212ENST00000583550 ONECUT3O60422 494 aaPredicted RBP8.81□□□□□ -1
CCDC178-212ENST00000583550 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
CCDC178-212ENST00000583550 CERKQ8TCT0 537 aa8.81□□□□□ -1
CCDC178-212ENST00000583550 SMYD5Q6GMV2 418 aa8.8□□□□□ -1
CCDC178-212ENST00000583550 STAC3Q96MF2 364 aa8.8□□□□□ -1
CCDC178-212ENST00000583550 TESPA1A2RU30 521 aaPredicted RBP8.79□□□□□ -1
CCDC178-212ENST00000583550 RNF166Q96A37 237 aaPredicted RBP8.78□□□□□ -1
CCDC178-212ENST00000583550 RABGEF1Q9UJ41 708 aa8.78□□□□□ -1
CCDC178-212ENST00000583550 BHMG1C9JSJ3 638 aaPredicted RBP8.77□□□□□ -1.01
CCDC178-212ENST00000583550 PROX2Q3B8N5 592 aa8.77□□□□□ -1.01
CCDC178-212ENST00000583550 NBPF3Q9H094 633 aa8.77□□□□□ -1.01
CCDC178-212ENST00000583550 TRIM6-TRIM34B2RNG4 842 aa8.76□□□□□ -1.01
CCDC178-212ENST00000583550 CDHR5Q9HBB8 845 aa8.75□□□□□ -1.01
CCDC178-212ENST00000583550 PRSS12P56730 875 aa8.74□□□□□ -1.01
CCDC178-212ENST00000583550 MRPL50Q8N5N7 158 aaKnown RBP8.74□□□□□ -1.01
CCDC178-212ENST00000583550 KIAA1468Q9P260 1216 aa8.74□□□□□ -1.01
CCDC178-212ENST00000583550 RBM27Q9P2N5 1060 aaKnown RBP8.74□□□□□ -1.01
CCDC178-212ENST00000583550 PACS2Q86VP3 889 aa8.73□□□□□ -1.01
CCDC178-212ENST00000583550 CDCA7LQ96GN5 454 aa8.73□□□□□ -1.01
CCDC178-212ENST00000583550 NPDC1Q9NQX5 325 aaPredicted RBP8.72□□□□□ -1.01
CCDC178-212ENST00000583550 GOLGA8CPA6NN73 597 aa8.71□□□□□ -1.02
CCDC178-212ENST00000583550 TULP1O00294 542 aaPredicted RBP8.71□□□□□ -1.02
CCDC178-212ENST00000583550 LAPTM4BQ86VI4 370 aa8.71□□□□□ -1.02
CCDC178-212ENST00000583550 TSKSQ9UJT2 592 aa8.71□□□□□ -1.02
CCDC178-212ENST00000583550 NUTM2FA1L443 756 aa8.7□□□□□ -1.02
CCDC178-212ENST00000583550 PTGDRQ13258 359 aa8.7□□□□□ -1.02
CCDC178-212ENST00000583550 NCAPD3P42695 1498 aa8.7□□□□□ -1.02
CCDC178-212ENST00000583550 FCHSD2O94868 740 aa8.68□□□□□ -1.02
CCDC178-212ENST00000583550 RBM26Q5T8P6 1007 aaKnown RBP8.68□□□□□ -1.02
CCDC178-212ENST00000583550 TTC13Q8NBP0 860 aa8.68□□□□□ -1.02
CCDC178-212ENST00000583550 NBPF26B4DH59 902 aa8.67□□□□□ -1.02
CCDC178-212ENST00000583550 PADI6Q6TGC4 694 aa8.67□□□□□ -1.02
CCDC178-212ENST00000583550 KCTD12Q96CX2 325 aaKnown RBP8.67□□□□□ -1.02
CCDC178-212ENST00000583550 FAM198AQ9UFP1 575 aa8.67□□□□□ -1.02
CCDC178-212ENST00000583550 FAM98CQ17RN3 349 aaKnown RBP8.66□□□□□ -1.02
CCDC178-212ENST00000583550 WNT2BQ93097 391 aa8.66□□□□□ -1.02
CCDC178-212ENST00000583550 TATDN2Q93075 761 aa8.65□□□□□ -1.02
CCDC178-212ENST00000583550 HCSTQ9UBK5 93 aa8.65□□□□□ -1.02
CCDC178-212ENST00000583550 SEPT9Q9UHD8 586 aaPredicted RBP8.65□□□□□ -1.02
CCDC178-212ENST00000583550 HIC1Q14526 733 aa8.64□□□□□ -1.03
CCDC178-212ENST00000583550 ANKK1Q8NFD2 765 aa8.64□□□□□ -1.03
CCDC178-212ENST00000583550 ZFRQ96KR1 1074 aaKnown RBP8.64□□□□□ -1.03
CCDC178-212ENST00000583550 PNMA3Q9UL41 463 aa8.64□□□□□ -1.03
CCDC178-212ENST00000583550 ERCC6Q03468 1493 aa8.64□□□□□ -1.03
CCDC178-212ENST00000583550 THSD4Q6ZMP0 1018 aa8.63□□□□□ -1.03
CCDC178-212ENST00000583550 NUDT18Q6ZVK8 323 aa8.62□□□□□ -1.03
CCDC178-212ENST00000583550 GPIHBP1Q8IV16 184 aa8.62□□□□□ -1.03
CCDC178-212ENST00000583550 SMARCA2P51531 1590 aa8.61□□□□□ -1.03
CCDC178-212ENST00000583550 SMAPO00193 183 aa8.61□□□□□ -1.03
CCDC178-212ENST00000583550 CUX2O14529 1486 aa8.6□□□□□ -1.03
CCDC178-212ENST00000583550 ATAD2BQ9ULI0 1458 aa8.6□□□□□ -1.03
CCDC178-212ENST00000583550 SOWAHBA6NEL2 793 aa8.6□□□□□ -1.03
CCDC178-212ENST00000583550 C3orf80F5H4A9 247 aa8.6□□□□□ -1.03
CCDC178-212ENST00000583550 GNPATO15228 680 aa8.6□□□□□ -1.03
CCDC178-212ENST00000583550 GPR37O15354 613 aa8.6□□□□□ -1.03
CCDC178-212ENST00000583550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCDC178-212ENST00000583550 HDGFP51858 240 aaKnown RBP8.58□□□□□ -1.04
CCDC178-212ENST00000583550 RBM46Q8TBY0 533 aaKnown RBP8.58□□□□□ -1.04
CCDC178-212ENST00000583550 LRCH3Q96II8 777 aa8.58□□□□□ -1.04
CCDC178-212ENST00000583550 EYA1Q99502 592 aa8.58□□□□□ -1.04
CCDC178-212ENST00000583550 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.58□□□□□ -1.04
CCDC178-212ENST00000583550 ADGRG1Q9Y653 693 aa8.58□□□□□ -1.04
CCDC178-212ENST00000583550 PTPN5P54829 565 aa8.57□□□□□ -1.04
CCDC178-212ENST00000583550 BCAMP50895 628 aa8.56□□□□□ -1.04
CCDC178-212ENST00000583550 BAZ1AQ9NRL2 1556 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms